RNA–Protein interactions for RNA: ENST00000599213.6

MED29-204, Transcript of mediator complex subunit 29, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MED29, Length 2,490 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED29-204ENST00000599213 NISCHQ9Y2I1 1504 aa31.71■■■□□ 2.67
MED29-204ENST00000599213 CCDC180Q9P1Z9 1646 aa27.47■■□□□ 1.99
MED29-204ENST00000599213 ZCCHC6Q5VYS8 1495 aaKnown RBP26.69■■□□□ 1.86
MED29-204ENST00000599213 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
MED29-204ENST00000599213 DCAF8L2P0C7V8 631 aa26.31■■□□□ 1.8
MED29-204ENST00000599213 DCAF1Q9Y4B6 1507 aa26.14■■□□□ 1.78
MED29-204ENST00000599213 ABCC9O60706 1549 aa25.92■■□□□ 1.74
MED29-204ENST00000599213 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
MED29-204ENST00000599213 HRCP23327 699 aa25.75■■□□□ 1.71
MED29-204ENST00000599213 MYO15BQ96JP2 1530 aa25.72■■□□□ 1.71
MED29-204ENST00000599213 NACADO15069 1562 aa25.56■■□□□ 1.68
MED29-204ENST00000599213 PELP1Q8IZL8 1130 aaKnown RBP25.49■■□□□ 1.67
MED29-204ENST00000599213 SCRIBQ14160 1630 aa25.44■■□□□ 1.66
MED29-204ENST00000599213 RB1CC1Q8TDY2 1594 aa25.31■■□□□ 1.64
MED29-204ENST00000599213 PPARGC1BQ86YN6 1023 aaKnown RBP25.26■■□□□ 1.63
MED29-204ENST00000599213 CHIC1Q5VXU3 224 aa25.19■■□□□ 1.62
MED29-204ENST00000599213 PCGF6Q9BYE7 350 aa24.97■■□□□ 1.59
MED29-204ENST00000599213 UNC13AQ9UPW8 1703 aa24.8■■□□□ 1.56
MED29-204ENST00000599213 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
MED29-204ENST00000599213 SCAF1Q9H7N4 1312 aaKnown RBP24.68■■□□□ 1.54
MED29-204ENST00000599213 CECR2Q9BXF3 1484 aa24.67■■□□□ 1.54
MED29-204ENST00000599213 MYT1Q01538 1121 aa24.61■■□□□ 1.53
MED29-204ENST00000599213 MROH2BQ7Z745 1585 aa24.55■■□□□ 1.52
MED29-204ENST00000599213 BICRAQ9NZM4 1560 aa24.53■■□□□ 1.52
MED29-204ENST00000599213 PABPN1Q86U42 306 aaKnown RBP eCLIP24.53■■□□□ 1.52
MED29-204ENST00000599213 BAZ1AQ9NRL2 1556 aaPredicted RBP24.47■■□□□ 1.51
MED29-204ENST00000599213 LOC105371045A0A1W2PR82 267 aa24.37■■□□□ 1.49
MED29-204ENST00000599213 WIZO95785 1651 aa24.37■■□□□ 1.49
MED29-204ENST00000599213 SMARCA4P51532 1647 aa24.33■■□□□ 1.49
MED29-204ENST00000599213 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
MED29-204ENST00000599213 TOP2AP11388 1531 aaKnown RBP24.08■■□□□ 1.45
MED29-204ENST00000599213 TRIM26Q12899 539 aaPredicted RBP24■■□□□ 1.43
MED29-204ENST00000599213 PEG3Q9GZU2 1588 aa23.96■■□□□ 1.43
MED29-204ENST00000599213 ZEB1P37275 1124 aaPredicted RBP23.92■■□□□ 1.42
MED29-204ENST00000599213 CCDC88BA6NC98 1476 aa23.88■■□□□ 1.41
MED29-204ENST00000599213 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
MED29-204ENST00000599213 SMARCA2P51531 1590 aa23.87■■□□□ 1.41
MED29-204ENST00000599213 ACIN1Q9UKV3 1341 aaKnown RBP23.87■■□□□ 1.41
MED29-204ENST00000599213 FAM9AQ8IZU1 332 aaPredicted RBP23.86■■□□□ 1.41
MED29-204ENST00000599213 NEUROD1Q13562 356 aa23.82■■□□□ 1.4
MED29-204ENST00000599213 EIF4G1Q04637 1599 aaKnown RBP23.8■■□□□ 1.4
MED29-204ENST00000599213 BAZ1BQ9UIG0 1483 aaKnown RBP23.79■■□□□ 1.4
MED29-204ENST00000599213 GTF3C3Q9Y5Q9 886 aa23.72■■□□□ 1.39
MED29-204ENST00000599213 NCAPD3P42695 1498 aa23.59■■□□□ 1.37
MED29-204ENST00000599213 EHMT2Q96KQ7 1210 aa23.58■■□□□ 1.37
MED29-204ENST00000599213 HMGXB3Q12766 1538 aa23.58■■□□□ 1.36
MED29-204ENST00000599213 ABCC8Q09428 1581 aa23.5■■□□□ 1.35
MED29-204ENST00000599213 CENPBP07199 599 aaPredicted RBP23.42■■□□□ 1.34
MED29-204ENST00000599213 CC2D2AQ9P2K1 1620 aa23.4■■□□□ 1.34
MED29-204ENST00000599213 WRNQ14191 1432 aaPredicted RBP eCLIP23.29■■□□□ 1.32
MED29-204ENST00000599213 EEA1Q15075 1411 aa23.22■■□□□ 1.31
MED29-204ENST00000599213 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
MED29-204ENST00000599213 SOGA1O94964 1423 aa23.21■■□□□ 1.31
MED29-204ENST00000599213 DIEXFQ68CQ4 756 aaKnown RBP23.18■■□□□ 1.3
MED29-204ENST00000599213 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
MED29-204ENST00000599213 CFTRP13569 1480 aa23.16■■□□□ 1.3
MED29-204ENST00000599213 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.29
MED29-204ENST00000599213 CEP162Q5TB80 1403 aa23.14■■□□□ 1.29
MED29-204ENST00000599213 CSRNP3Q8WYN3 585 aa23.12■■□□□ 1.29
MED29-204ENST00000599213 BCL11AQ9H165 835 aa23.1■■□□□ 1.29
MED29-204ENST00000599213 RUSC2Q8N2Y8 1516 aa23.07■■□□□ 1.28
MED29-204ENST00000599213 CADPSQ9ULU8 1353 aa23.05■■□□□ 1.28
MED29-204ENST00000599213 TOP2BQ02880 1626 aa23.02■■□□□ 1.28
MED29-204ENST00000599213 PRDM2Q13029 1718 aa23.01■■□□□ 1.27
MED29-204ENST00000599213 GOLGA3Q08378 1498 aa23.01■■□□□ 1.27
MED29-204ENST00000599213 UBTFP17480 764 aaKnown RBP22.99■■□□□ 1.27
MED29-204ENST00000599213 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
MED29-204ENST00000599213 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
MED29-204ENST00000599213 CCER1Q8TC90 406 aaPredicted RBP22.93■■□□□ 1.26
MED29-204ENST00000599213 CUX1P39880 1505 aa22.93■■□□□ 1.26
MED29-204ENST00000599213 YTHDC1Q96MU7 727 aaKnown RBP22.89■■□□□ 1.26
MED29-204ENST00000599213 CEP164Q9UPV0 1460 aa22.89■■□□□ 1.26
MED29-204ENST00000599213 KIF21BO75037 1637 aa22.87■■□□□ 1.25
MED29-204ENST00000599213 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
MED29-204ENST00000599213 NESP48681 1621 aa22.81■■□□□ 1.24
MED29-204ENST00000599213 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
MED29-204ENST00000599213 ANP32EQ9BTT0 268 aa22.77■■□□□ 1.24
MED29-204ENST00000599213 LAMC3Q9Y6N6 1575 aa22.76■■□□□ 1.23
MED29-204ENST00000599213 CLIP1P30622 1438 aa22.72■■□□□ 1.23
MED29-204ENST00000599213 KIF27Q86VH2 1401 aa22.67■■□□□ 1.22
MED29-204ENST00000599213 RAPGEF2Q9Y4G8 1499 aa22.66■■□□□ 1.22
MED29-204ENST00000599213 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
MED29-204ENST00000599213 VPS8Q8N3P4 1428 aa22.64■■□□□ 1.21
MED29-204ENST00000599213 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
MED29-204ENST00000599213 PDS5BQ9NTI5 1447 aa22.61■■□□□ 1.21
MED29-204ENST00000599213 ZNF316A6NFI3 1004 aaPredicted RBP22.6■■□□□ 1.21
MED29-204ENST00000599213 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
MED29-204ENST00000599213 CUX2O14529 1486 aa22.58■■□□□ 1.21
MED29-204ENST00000599213 MIER1Q8N108 512 aa22.58■■□□□ 1.21
MED29-204ENST00000599213 PRXQ9BXM0 1461 aa22.55■■□□□ 1.2
MED29-204ENST00000599213 PRKCSHP14314 528 aaPredicted RBP22.53■■□□□ 1.2
MED29-204ENST00000599213 APLP2Q06481 763 aa22.52■■□□□ 1.2
MED29-204ENST00000599213 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.2
MED29-204ENST00000599213 TSHZ2Q9NRE2 1034 aa22.51■■□□□ 1.19
MED29-204ENST00000599213 URB2Q14146 1524 aaKnown RBP22.51■■□□□ 1.19
MED29-204ENST00000599213 KIF21AQ7Z4S6 1674 aa22.5■■□□□ 1.19
MED29-204ENST00000599213 POLA1P09884 1462 aaPredicted RBP22.5■■□□□ 1.19
MED29-204ENST00000599213 RAD54L2Q9Y4B4 1467 aa22.47■■□□□ 1.19
MED29-204ENST00000599213 SUPT16HQ9Y5B9 1047 aaKnown RBP22.45■■□□□ 1.18
MED29-204ENST00000599213 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms