RNA–Protein interactions for RNA: ENST00000368937.5

PRUNE1-205, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 1,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-205ENST00000368937 NISCHQ9Y2I1 1504 aa31.93■■■□□ 2.7
PRUNE1-205ENST00000368937 CCDC180Q9P1Z9 1646 aa27.83■■■□□ 2.05
PRUNE1-205ENST00000368937 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
PRUNE1-205ENST00000368937 ABCC9O60706 1549 aa26.68■■□□□ 1.86
PRUNE1-205ENST00000368937 DCAF8L2P0C7V8 631 aa26.66■■□□□ 1.86
PRUNE1-205ENST00000368937 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
PRUNE1-205ENST00000368937 SHROOM4Q9ULL8 1493 aa26.15■■□□□ 1.78
PRUNE1-205ENST00000368937 MYO15BQ96JP2 1530 aa26.03■■□□□ 1.76
PRUNE1-205ENST00000368937 NACADO15069 1562 aa26■■□□□ 1.75
PRUNE1-205ENST00000368937 RB1CC1Q8TDY2 1594 aa25.84■■□□□ 1.73
PRUNE1-205ENST00000368937 SCRIBQ14160 1630 aa25.74■■□□□ 1.71
PRUNE1-205ENST00000368937 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
PRUNE1-205ENST00000368937 PABPN1Q86U42 306 aaKnown RBP eCLIP25.19■■□□□ 1.62
PRUNE1-205ENST00000368937 BICRAQ9NZM4 1560 aa25.1■■□□□ 1.61
PRUNE1-205ENST00000368937 SUPT5HO00267 1087 aaKnown RBP25.05■■□□□ 1.6
PRUNE1-205ENST00000368937 CECR2Q9BXF3 1484 aa24.9■■□□□ 1.58
PRUNE1-205ENST00000368937 RSF1Q96T23 1441 aaPredicted RBP24.74■■□□□ 1.55
PRUNE1-205ENST00000368937 MROH2BQ7Z745 1585 aa24.71■■□□□ 1.55
PRUNE1-205ENST00000368937 BAZ1AQ9NRL2 1556 aaPredicted RBP24.66■■□□□ 1.54
PRUNE1-205ENST00000368937 SMARCA4P51532 1647 aa24.59■■□□□ 1.53
PRUNE1-205ENST00000368937 WIZO95785 1651 aa24.51■■□□□ 1.51
PRUNE1-205ENST00000368937 EIF4G1Q04637 1599 aaKnown RBP24.38■■□□□ 1.49
PRUNE1-205ENST00000368937 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
PRUNE1-205ENST00000368937 PEG3Q9GZU2 1588 aa24.22■■□□□ 1.47
PRUNE1-205ENST00000368937 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
PRUNE1-205ENST00000368937 SMARCA2P51531 1590 aa24.18■■□□□ 1.46
PRUNE1-205ENST00000368937 BAZ1BQ9UIG0 1483 aaKnown RBP24.12■■□□□ 1.45
PRUNE1-205ENST00000368937 CC2D2AQ9P2K1 1620 aa24.07■■□□□ 1.44
PRUNE1-205ENST00000368937 NCAPD3P42695 1498 aa24.02■■□□□ 1.44
PRUNE1-205ENST00000368937 CCDC88BA6NC98 1476 aa23.99■■□□□ 1.43
PRUNE1-205ENST00000368937 HMGXB3Q12766 1538 aa23.95■■□□□ 1.42
PRUNE1-205ENST00000368937 CHIC1Q5VXU3 224 aa23.78■■□□□ 1.4
PRUNE1-205ENST00000368937 DNAJC5BQ9UF47 199 aa23.73■■□□□ 1.39
PRUNE1-205ENST00000368937 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
PRUNE1-205ENST00000368937 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
PRUNE1-205ENST00000368937 CFTRP13569 1480 aa23.46■■□□□ 1.35
PRUNE1-205ENST00000368937 CADPSQ9ULU8 1353 aa23.44■■□□□ 1.34
PRUNE1-205ENST00000368937 NESP48681 1621 aa23.37■■□□□ 1.33
PRUNE1-205ENST00000368937 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.32
PRUNE1-205ENST00000368937 PRDM2Q13029 1718 aa23.26■■□□□ 1.31
PRUNE1-205ENST00000368937 LAMC3Q9Y6N6 1575 aa23.22■■□□□ 1.31
PRUNE1-205ENST00000368937 SYNJ1O43426 1573 aa23.22■■□□□ 1.31
PRUNE1-205ENST00000368937 FANCD2Q9BXW9 1451 aa23.21■■□□□ 1.31
PRUNE1-205ENST00000368937 FAM9AQ8IZU1 332 aaPredicted RBP23.16■■□□□ 1.3
PRUNE1-205ENST00000368937 CUX1P39880 1505 aa23.11■■□□□ 1.29
PRUNE1-205ENST00000368937 PDS5BQ9NTI5 1447 aa23.09■■□□□ 1.29
PRUNE1-205ENST00000368937 TOP2BQ02880 1626 aa23.08■■□□□ 1.29
PRUNE1-205ENST00000368937 CEP164Q9UPV0 1460 aa23.07■■□□□ 1.28
PRUNE1-205ENST00000368937 BIVM-ERCC5R4GMW8 1640 aa23.03■■□□□ 1.28
PRUNE1-205ENST00000368937 KIF21AQ7Z4S6 1674 aa23.02■■□□□ 1.28
PRUNE1-205ENST00000368937 SOGA1O94964 1423 aa23■■□□□ 1.27
PRUNE1-205ENST00000368937 LOC105371045A0A1W2PR82 267 aa22.96■■□□□ 1.27
PRUNE1-205ENST00000368937 EHMT2Q96KQ7 1210 aa22.94■■□□□ 1.26
PRUNE1-205ENST00000368937 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
PRUNE1-205ENST00000368937 URB2Q14146 1524 aaKnown RBP22.92■■□□□ 1.26
PRUNE1-205ENST00000368937 TOPBP1Q92547 1522 aa22.91■■□□□ 1.26
PRUNE1-205ENST00000368937 DNMBPQ6XZF7 1577 aa22.91■■□□□ 1.26
PRUNE1-205ENST00000368937 FGD5Q6ZNL6 1462 aa22.89■■□□□ 1.26
PRUNE1-205ENST00000368937 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
PRUNE1-205ENST00000368937 POLA1P09884 1462 aaPredicted RBP22.81■■□□□ 1.24
PRUNE1-205ENST00000368937 MRC2Q9UBG0 1479 aa22.8■■□□□ 1.24
PRUNE1-205ENST00000368937 EEA1Q15075 1411 aa22.78■■□□□ 1.24
PRUNE1-205ENST00000368937 RAD54L2Q9Y4B4 1467 aa22.78■■□□□ 1.24
PRUNE1-205ENST00000368937 CSRNP3Q8WYN3 585 aa22.77■■□□□ 1.24
PRUNE1-205ENST00000368937 CUX2O14529 1486 aa22.73■■□□□ 1.23
PRUNE1-205ENST00000368937 KIF27Q86VH2 1401 aa22.71■■□□□ 1.23
PRUNE1-205ENST00000368937 WDR62O43379 1518 aa22.67■■□□□ 1.22
PRUNE1-205ENST00000368937 THOC2Q8NI27 1593 aaKnown RBP22.66■■□□□ 1.22
PRUNE1-205ENST00000368937 ABCA10Q8WWZ4 1543 aa22.63■■□□□ 1.21
PRUNE1-205ENST00000368937 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
PRUNE1-205ENST00000368937 TARBP1Q13395 1621 aaKnown RBP22.56■■□□□ 1.2
PRUNE1-205ENST00000368937 UBTFP17480 764 aaKnown RBP22.55■■□□□ 1.2
PRUNE1-205ENST00000368937 WDR97A6NE52 1622 aa22.55■■□□□ 1.2
PRUNE1-205ENST00000368937 IGF1RP08069 1367 aa22.54■■□□□ 1.2
PRUNE1-205ENST00000368937 GOLGA3Q08378 1498 aa22.53■■□□□ 1.2
PRUNE1-205ENST00000368937 RAPGEF2Q9Y4G8 1499 aa22.53■■□□□ 1.2
PRUNE1-205ENST00000368937 KIF21BO75037 1637 aa22.52■■□□□ 1.19
PRUNE1-205ENST00000368937 PRXQ9BXM0 1461 aa22.49■■□□□ 1.19
PRUNE1-205ENST00000368937 IFT140Q96RY7 1462 aa22.48■■□□□ 1.19
PRUNE1-205ENST00000368937 GAPVD1Q14C86 1478 aa22.48■■□□□ 1.19
PRUNE1-205ENST00000368937 AQRO60306 1485 aaKnown RBP eCLIP22.47■■□□□ 1.19
PRUNE1-205ENST00000368937 ZNF608Q9ULD9 1512 aaPredicted RBP22.46■■□□□ 1.19
PRUNE1-205ENST00000368937 ABCA5Q8WWZ7 1642 aa22.46■■□□□ 1.19
PRUNE1-205ENST00000368937 CARMIL1Q5VZK9 1371 aa22.43■■□□□ 1.18
PRUNE1-205ENST00000368937 TNIKQ9UKE5 1360 aa22.4■■□□□ 1.18
PRUNE1-205ENST00000368937 ERICH3Q5RHP9 1530 aa22.39■■□□□ 1.18
PRUNE1-205ENST00000368937 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
PRUNE1-205ENST00000368937 CEP162Q5TB80 1403 aa22.34■■□□□ 1.17
PRUNE1-205ENST00000368937 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.17
PRUNE1-205ENST00000368937 PBRM1Q86U86 1689 aa22.32■■□□□ 1.16
PRUNE1-205ENST00000368937 CUL7Q14999 1698 aa22.31■■□□□ 1.16
PRUNE1-205ENST00000368937 GRIN2BQ13224 1484 aa22.3■■□□□ 1.16
PRUNE1-205ENST00000368937 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
PRUNE1-205ENST00000368937 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.14
PRUNE1-205ENST00000368937 CLIP1P30622 1438 aa22.2■■□□□ 1.14
PRUNE1-205ENST00000368937 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
PRUNE1-205ENST00000368937 FBLN2P98095 1184 aa22.13■■□□□ 1.13
PRUNE1-205ENST00000368937 MAGI1Q96QZ7 1491 aaPredicted RBP22.11■■□□□ 1.13
PRUNE1-205ENST00000368937 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
PRUNE1-205ENST00000368937 CTTNBP2Q8WZ74 1663 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms