Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 AC092902.6-201ENST00000641783 218 ntBASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
KCNIP4Q6PIL6 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 GNB5-201ENST00000261837 8906 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 AC092865.5-201ENST00000545435 363 ntBASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 AC004835.2-201ENST00000603762 682 ntBASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 AC079781.4-201ENST00000641908 219 ntBASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 SHC1P1-201ENST00000425230 1745 ntBASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 SALL4P5-201ENST00000419001 1760 ntBASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.03□□□□□ -0.64
KCNIP4Q6PIL6 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
KCNIP4Q6PIL6 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
KCNIP4Q6PIL6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms