RNA–Protein interactions for RNA: ENST00000396200.3

PDP1-202, Transcript of pyruvate dehyrogenase phosphatase catalytic subunit 1, humanhuman

APPRIS ALT1 TSL 4 BASIC

Gene PDP1, Length 4,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDP1-202ENST00000396200 NISCHQ9Y2I1 1504 aa26.11■■□□□ 1.77
PDP1-202ENST00000396200 DCAF8L2P0C7V8 631 aa24.1■■□□□ 1.45
PDP1-202ENST00000396200 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.29
PDP1-202ENST00000396200 SUPT5HO00267 1087 aaKnown RBP22.77■■□□□ 1.24
PDP1-202ENST00000396200 ABCC9O60706 1549 aa22.12■■□□□ 1.13
PDP1-202ENST00000396200 CCDC180Q9P1Z9 1646 aa22.08■■□□□ 1.13
PDP1-202ENST00000396200 ZCCHC6Q5VYS8 1495 aaKnown RBP21.75■■□□□ 1.07
PDP1-202ENST00000396200 PABPN1Q86U42 306 aaKnown RBP eCLIP21.41■■□□□ 1.02
PDP1-202ENST00000396200 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
PDP1-202ENST00000396200 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
PDP1-202ENST00000396200 FAM9AQ8IZU1 332 aaPredicted RBP21.25■□□□□ 0.99
PDP1-202ENST00000396200 TRIM41Q8WV44 630 aa21.22■□□□□ 0.99
PDP1-202ENST00000396200 RB1CC1Q8TDY2 1594 aa21.06■□□□□ 0.96
PDP1-202ENST00000396200 DCAF1Q9Y4B6 1507 aa21.05■□□□□ 0.96
PDP1-202ENST00000396200 NACADO15069 1562 aa21.05■□□□□ 0.96
PDP1-202ENST00000396200 PCGF6Q9BYE7 350 aa21.03■□□□□ 0.96
PDP1-202ENST00000396200 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
PDP1-202ENST00000396200 HRCP23327 699 aa20.95■□□□□ 0.94
PDP1-202ENST00000396200 RANGAP1P46060 587 aaPredicted RBP20.65■□□□□ 0.9
PDP1-202ENST00000396200 UBTFP17480 764 aaKnown RBP20.65■□□□□ 0.9
PDP1-202ENST00000396200 MYO15BQ96JP2 1530 aa20.64■□□□□ 0.89
PDP1-202ENST00000396200 APLP2Q06481 763 aa20.62■□□□□ 0.89
PDP1-202ENST00000396200 PPARGC1BQ86YN6 1023 aaKnown RBP20.58■□□□□ 0.89
PDP1-202ENST00000396200 LOC105371045A0A1W2PR82 267 aa20.57■□□□□ 0.88
PDP1-202ENST00000396200 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
PDP1-202ENST00000396200 PELP1Q8IZL8 1130 aaKnown RBP20.52■□□□□ 0.88
PDP1-202ENST00000396200 TTBK1Q5TCY1 1321 aaPredicted RBP20.51■□□□□ 0.87
PDP1-202ENST00000396200 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
PDP1-202ENST00000396200 TRIM26Q12899 539 aaPredicted RBP20.35■□□□□ 0.85
PDP1-202ENST00000396200 BAZ1AQ9NRL2 1556 aaPredicted RBP20.33■□□□□ 0.85
PDP1-202ENST00000396200 ATP1B4Q9UN42 357 aaPredicted RBP20.27■□□□□ 0.84
PDP1-202ENST00000396200 MROH2BQ7Z745 1585 aa20.23■□□□□ 0.83
PDP1-202ENST00000396200 ZEB1P37275 1124 aaPredicted RBP20.2■□□□□ 0.82
PDP1-202ENST00000396200 BAZ1BQ9UIG0 1483 aaKnown RBP20.17■□□□□ 0.82
PDP1-202ENST00000396200 CSRNP3Q8WYN3 585 aa20.04■□□□□ 0.8
PDP1-202ENST00000396200 WIZO95785 1651 aa19.99■□□□□ 0.79
PDP1-202ENST00000396200 SMARCA2P51531 1590 aa19.9■□□□□ 0.78
PDP1-202ENST00000396200 SMARCA4P51532 1647 aa19.89■□□□□ 0.78
PDP1-202ENST00000396200 CCDC88BA6NC98 1476 aa19.88■□□□□ 0.77
PDP1-202ENST00000396200 CCER1Q8TC90 406 aaPredicted RBP19.86■□□□□ 0.77
PDP1-202ENST00000396200 MYT1Q01538 1121 aa19.84■□□□□ 0.77
PDP1-202ENST00000396200 WRNQ14191 1432 aaPredicted RBP eCLIP19.82■□□□□ 0.76
PDP1-202ENST00000396200 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
PDP1-202ENST00000396200 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
PDP1-202ENST00000396200 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
PDP1-202ENST00000396200 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
PDP1-202ENST00000396200 FBLN2P98095 1184 aa19.74■□□□□ 0.75
PDP1-202ENST00000396200 SCAF1Q9H7N4 1312 aaKnown RBP19.73■□□□□ 0.75
PDP1-202ENST00000396200 ITGAEP38570 1179 aa19.69■□□□□ 0.74
PDP1-202ENST00000396200 P3H3Q8IVL6 736 aa19.64■□□□□ 0.73
PDP1-202ENST00000396200 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
PDP1-202ENST00000396200 EEA1Q15075 1411 aa19.6■□□□□ 0.73
PDP1-202ENST00000396200 BICRAQ9NZM4 1560 aa19.59■□□□□ 0.73
PDP1-202ENST00000396200 EIF4G1Q04637 1599 aaKnown RBP19.56■□□□□ 0.72
PDP1-202ENST00000396200 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
PDP1-202ENST00000396200 SOGA1O94964 1423 aa19.5■□□□□ 0.71
PDP1-202ENST00000396200 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
PDP1-202ENST00000396200 CADPSQ9ULU8 1353 aa19.49■□□□□ 0.71
PDP1-202ENST00000396200 NCAPD3P42695 1498 aa19.47■□□□□ 0.71
PDP1-202ENST00000396200 UNC13AQ9UPW8 1703 aa19.47■□□□□ 0.71
PDP1-202ENST00000396200 GOLGA3Q08378 1498 aa19.46■□□□□ 0.71
PDP1-202ENST00000396200 FAM50AQ14320 339 aaKnown RBP19.43■□□□□ 0.7
PDP1-202ENST00000396200 ERCC6Q03468 1493 aa19.42■□□□□ 0.7
PDP1-202ENST00000396200 DIEXFQ68CQ4 756 aaKnown RBP19.41■□□□□ 0.7
PDP1-202ENST00000396200 CLIP1P30622 1438 aa19.4■□□□□ 0.7
PDP1-202ENST00000396200 ARID3CA6NKF2 412 aa19.39■□□□□ 0.69
PDP1-202ENST00000396200 PDS5BQ9NTI5 1447 aa19.39■□□□□ 0.69
PDP1-202ENST00000396200 CEP164Q9UPV0 1460 aa19.38■□□□□ 0.69
PDP1-202ENST00000396200 CEP162Q5TB80 1403 aa19.37■□□□□ 0.69
PDP1-202ENST00000396200 CUX2O14529 1486 aa19.35■□□□□ 0.69
PDP1-202ENST00000396200 ACIN1Q9UKV3 1341 aaKnown RBP19.34■□□□□ 0.69
PDP1-202ENST00000396200 TNIKQ9UKE5 1360 aa19.34■□□□□ 0.69
PDP1-202ENST00000396200 CHMP7Q8WUX9 453 aaPredicted RBP19.34■□□□□ 0.69
PDP1-202ENST00000396200 YTHDC1Q96MU7 727 aaKnown RBP19.29■□□□□ 0.68
PDP1-202ENST00000396200 MYT1LQ9UL68 1186 aa19.28■□□□□ 0.68
PDP1-202ENST00000396200 GTF3C3Q9Y5Q9 886 aa19.28■□□□□ 0.68
PDP1-202ENST00000396200 CC2D2AQ9P2K1 1620 aa19.27■□□□□ 0.67
PDP1-202ENST00000396200 NEUROD1Q13562 356 aa19.25■□□□□ 0.67
PDP1-202ENST00000396200 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
PDP1-202ENST00000396200 CARMIL1Q5VZK9 1371 aa19.24■□□□□ 0.67
PDP1-202ENST00000396200 HMGXB3Q12766 1538 aa19.22■□□□□ 0.67
PDP1-202ENST00000396200 TDRD9Q8NDG6 1382 aaKnown RBP19.18■□□□□ 0.66
PDP1-202ENST00000396200 CDK11AQ9UQ88 783 aaPredicted RBP19.17■□□□□ 0.66
PDP1-202ENST00000396200 RUSC2Q8N2Y8 1516 aa19.16■□□□□ 0.66
PDP1-202ENST00000396200 CFTRP13569 1480 aa19.12■□□□□ 0.65
PDP1-202ENST00000396200 PEG3Q9GZU2 1588 aa19.09■□□□□ 0.65
PDP1-202ENST00000396200 TRIM52Q96A61 297 aa19.09■□□□□ 0.65
PDP1-202ENST00000396200 ZNF316A6NFI3 1004 aaPredicted RBP19.08■□□□□ 0.64
PDP1-202ENST00000396200 ZNF777Q9ULD5 760 aaPredicted RBP19.05■□□□□ 0.64
PDP1-202ENST00000396200 NESP48681 1621 aa19.05■□□□□ 0.64
PDP1-202ENST00000396200 MTUS2Q5JR59 1369 aa19.04■□□□□ 0.64
PDP1-202ENST00000396200 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.64
PDP1-202ENST00000396200 RAPGEF2Q9Y4G8 1499 aa19.01■□□□□ 0.63
PDP1-202ENST00000396200 DNAJC5BQ9UF47 199 aa19■□□□□ 0.63
PDP1-202ENST00000396200 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
PDP1-202ENST00000396200 RAD54L2Q9Y4B4 1467 aa18.94■□□□□ 0.62
PDP1-202ENST00000396200 VPS8Q8N3P4 1428 aa18.92■□□□□ 0.62
PDP1-202ENST00000396200 FHAD1B1AJZ9 1412 aa18.89■□□□□ 0.62
PDP1-202ENST00000396200 IGF1RP08069 1367 aa18.89■□□□□ 0.61
PDP1-202ENST00000396200 NPM1P06748 294 aaKnown RBP eCLIP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms