RNA–Protein interactions for RNA: ENST00000354042.8

SLC13A4-201, Transcript of solute carrier family 13 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A4, Length 2,897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A4-201ENST00000354042 NISCHQ9Y2I1 1504 aa26.45■■□□□ 1.83
SLC13A4-201ENST00000354042 CCDC180Q9P1Z9 1646 aa22.74■■□□□ 1.23
SLC13A4-201ENST00000354042 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.17
SLC13A4-201ENST00000354042 ZCCHC6Q5VYS8 1495 aaKnown RBP22.28■■□□□ 1.16
SLC13A4-201ENST00000354042 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
SLC13A4-201ENST00000354042 SUPT5HO00267 1087 aaKnown RBP22.11■■□□□ 1.13
SLC13A4-201ENST00000354042 HRCP23327 699 aa21.82■■□□□ 1.08
SLC13A4-201ENST00000354042 DCAF1Q9Y4B6 1507 aa21.66■■□□□ 1.06
SLC13A4-201ENST00000354042 PCGF6Q9BYE7 350 aa21.65■■□□□ 1.06
SLC13A4-201ENST00000354042 MYO15BQ96JP2 1530 aa21.61■■□□□ 1.05
SLC13A4-201ENST00000354042 PPARGC1BQ86YN6 1023 aaKnown RBP21.57■■□□□ 1.04
SLC13A4-201ENST00000354042 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
SLC13A4-201ENST00000354042 ABCC9O60706 1549 aa21.53■■□□□ 1.04
SLC13A4-201ENST00000354042 SCRIBQ14160 1630 aa21.29■■□□□ 1
SLC13A4-201ENST00000354042 LOC105371045A0A1W2PR82 267 aa21.13■□□□□ 0.97
SLC13A4-201ENST00000354042 NACADO15069 1562 aa21.11■□□□□ 0.97
SLC13A4-201ENST00000354042 RB1CC1Q8TDY2 1594 aa20.9■□□□□ 0.94
SLC13A4-201ENST00000354042 TRIM26Q12899 539 aaPredicted RBP20.86■□□□□ 0.93
SLC13A4-201ENST00000354042 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
SLC13A4-201ENST00000354042 CECR2Q9BXF3 1484 aa20.7■□□□□ 0.91
SLC13A4-201ENST00000354042 UNC13AQ9UPW8 1703 aa20.68■□□□□ 0.9
SLC13A4-201ENST00000354042 SCAF1Q9H7N4 1312 aaKnown RBP20.59■□□□□ 0.89
SLC13A4-201ENST00000354042 PELP1Q8IZL8 1130 aaKnown RBP20.58■□□□□ 0.89
SLC13A4-201ENST00000354042 MROH2BQ7Z745 1585 aa20.57■□□□□ 0.88
SLC13A4-201ENST00000354042 ZEB1P37275 1124 aaPredicted RBP20.54■□□□□ 0.88
SLC13A4-201ENST00000354042 EHMT2Q96KQ7 1210 aa20.54■□□□□ 0.88
SLC13A4-201ENST00000354042 FAM9AQ8IZU1 332 aaPredicted RBP20.5■□□□□ 0.87
SLC13A4-201ENST00000354042 PABPN1Q86U42 306 aaKnown RBP eCLIP20.48■□□□□ 0.87
SLC13A4-201ENST00000354042 WIZO95785 1651 aa20.47■□□□□ 0.87
SLC13A4-201ENST00000354042 TRIM41Q8WV44 630 aa20.43■□□□□ 0.86
SLC13A4-201ENST00000354042 BICRAQ9NZM4 1560 aa20.38■□□□□ 0.85
SLC13A4-201ENST00000354042 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
SLC13A4-201ENST00000354042 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
SLC13A4-201ENST00000354042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.15■□□□□ 0.82
SLC13A4-201ENST00000354042 NEUROD1Q13562 356 aa20.13■□□□□ 0.81
SLC13A4-201ENST00000354042 ACIN1Q9UKV3 1341 aaKnown RBP20.11■□□□□ 0.81
SLC13A4-201ENST00000354042 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
SLC13A4-201ENST00000354042 CCER1Q8TC90 406 aaPredicted RBP20.08■□□□□ 0.8
SLC13A4-201ENST00000354042 GTF3C3Q9Y5Q9 886 aa20.01■□□□□ 0.79
SLC13A4-201ENST00000354042 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
SLC13A4-201ENST00000354042 SMARCA2P51531 1590 aa19.99■□□□□ 0.79
SLC13A4-201ENST00000354042 TTBK1Q5TCY1 1321 aaPredicted RBP19.98■□□□□ 0.79
SLC13A4-201ENST00000354042 EIF4G1Q04637 1599 aaKnown RBP19.94■□□□□ 0.78
SLC13A4-201ENST00000354042 DIEXFQ68CQ4 756 aaKnown RBP19.94■□□□□ 0.78
SLC13A4-201ENST00000354042 CENPBP07199 599 aaPredicted RBP19.89■□□□□ 0.77
SLC13A4-201ENST00000354042 PEG3Q9GZU2 1588 aa19.87■□□□□ 0.77
SLC13A4-201ENST00000354042 ATAD2BQ9ULI0 1458 aa19.85■□□□□ 0.77
SLC13A4-201ENST00000354042 ABCC8Q09428 1581 aa19.84■□□□□ 0.77
SLC13A4-201ENST00000354042 BAZ1BQ9UIG0 1483 aaKnown RBP19.78■□□□□ 0.76
SLC13A4-201ENST00000354042 YTHDC1Q96MU7 727 aaKnown RBP19.76■□□□□ 0.75
SLC13A4-201ENST00000354042 MYT1Q01538 1121 aa19.64■□□□□ 0.73
SLC13A4-201ENST00000354042 ZNF316A6NFI3 1004 aaPredicted RBP19.56■□□□□ 0.72
SLC13A4-201ENST00000354042 CEP162Q5TB80 1403 aa19.54■□□□□ 0.72
SLC13A4-201ENST00000354042 NCAPD3P42695 1498 aa19.52■□□□□ 0.72
SLC13A4-201ENST00000354042 SOGA1O94964 1423 aa19.51■□□□□ 0.71
SLC13A4-201ENST00000354042 WRNQ14191 1432 aaPredicted RBP eCLIP19.51■□□□□ 0.71
SLC13A4-201ENST00000354042 HMGXB3Q12766 1538 aa19.5■□□□□ 0.71
SLC13A4-201ENST00000354042 RUSC2Q8N2Y8 1516 aa19.47■□□□□ 0.71
SLC13A4-201ENST00000354042 SYNJ1O43426 1573 aa19.47■□□□□ 0.71
SLC13A4-201ENST00000354042 MIER1Q8N108 512 aa19.47■□□□□ 0.71
SLC13A4-201ENST00000354042 UBTFP17480 764 aaKnown RBP19.44■□□□□ 0.7
SLC13A4-201ENST00000354042 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
SLC13A4-201ENST00000354042 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
SLC13A4-201ENST00000354042 CC2D2AQ9P2K1 1620 aa19.38■□□□□ 0.69
SLC13A4-201ENST00000354042 CSRNP3Q8WYN3 585 aa19.37■□□□□ 0.69
SLC13A4-201ENST00000354042 CFTRP13569 1480 aa19.24■□□□□ 0.67
SLC13A4-201ENST00000354042 TOP2BQ02880 1626 aa19.24■□□□□ 0.67
SLC13A4-201ENST00000354042 EEA1Q15075 1411 aa19.23■□□□□ 0.67
SLC13A4-201ENST00000354042 GOLGA3Q08378 1498 aa19.21■□□□□ 0.67
SLC13A4-201ENST00000354042 BIVM-ERCC5R4GMW8 1640 aa19.19■□□□□ 0.66
SLC13A4-201ENST00000354042 CUX1P39880 1505 aa19.19■□□□□ 0.66
SLC13A4-201ENST00000354042 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
SLC13A4-201ENST00000354042 PRDM2Q13029 1718 aa19.14■□□□□ 0.65
SLC13A4-201ENST00000354042 CADPSQ9ULU8 1353 aa19.12■□□□□ 0.65
SLC13A4-201ENST00000354042 CLIP1P30622 1438 aa19.08■□□□□ 0.64
SLC13A4-201ENST00000354042 DNAJC5BQ9UF47 199 aa19.07■□□□□ 0.64
SLC13A4-201ENST00000354042 CEP164Q9UPV0 1460 aa19.07■□□□□ 0.64
SLC13A4-201ENST00000354042 KIF21BO75037 1637 aa19.06■□□□□ 0.64
SLC13A4-201ENST00000354042 RAPGEF2Q9Y4G8 1499 aa19.06■□□□□ 0.64
SLC13A4-201ENST00000354042 SUPT16HQ9Y5B9 1047 aaKnown RBP19.05■□□□□ 0.64
SLC13A4-201ENST00000354042 NESP48681 1621 aa19.05■□□□□ 0.64
SLC13A4-201ENST00000354042 APLP2Q06481 763 aa19.04■□□□□ 0.64
SLC13A4-201ENST00000354042 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
SLC13A4-201ENST00000354042 FANCD2Q9BXW9 1451 aa18.97■□□□□ 0.63
SLC13A4-201ENST00000354042 KIF27Q86VH2 1401 aa18.92■□□□□ 0.62
SLC13A4-201ENST00000354042 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
SLC13A4-201ENST00000354042 TSHZ2Q9NRE2 1034 aa18.9■□□□□ 0.62
SLC13A4-201ENST00000354042 CUX2O14529 1486 aa18.89■□□□□ 0.61
SLC13A4-201ENST00000354042 PRXQ9BXM0 1461 aa18.88■□□□□ 0.61
SLC13A4-201ENST00000354042 BCANQ96GW7 911 aa18.85■□□□□ 0.61
SLC13A4-201ENST00000354042 DHX57Q6P158 1386 aaKnown RBP18.85■□□□□ 0.61
SLC13A4-201ENST00000354042 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
SLC13A4-201ENST00000354042 CLSPNQ9HAW4 1339 aa18.82■□□□□ 0.6
SLC13A4-201ENST00000354042 KCNH8Q96L42 1107 aa18.82■□□□□ 0.6
SLC13A4-201ENST00000354042 RAD54L2Q9Y4B4 1467 aa18.81■□□□□ 0.6
SLC13A4-201ENST00000354042 ANP32EQ9BTT0 268 aa18.8■□□□□ 0.6
SLC13A4-201ENST00000354042 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
SLC13A4-201ENST00000354042 KANK4Q5T7N3 995 aaPredicted RBP18.79■□□□□ 0.6
SLC13A4-201ENST00000354042 DNMBPQ6XZF7 1577 aa18.79■□□□□ 0.6
SLC13A4-201ENST00000354042 LAMC3Q9Y6N6 1575 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms