RNA–Protein interactions for RNA: ENST00000369146.7

SV2A-202, Transcript of synaptic vesicle glycoprotein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SV2A, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SV2A-202ENST00000369146 NISCHQ9Y2I1 1504 aa24.03■■□□□ 1.44
SV2A-202ENST00000369146 DCAF8L2P0C7V8 631 aa22.64■■□□□ 1.22
SV2A-202ENST00000369146 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
SV2A-202ENST00000369146 SUPT5HO00267 1087 aaKnown RBP21.97■■□□□ 1.11
SV2A-202ENST00000369146 EHMT2Q96KQ7 1210 aa20.88■□□□□ 0.93
SV2A-202ENST00000369146 FAM9AQ8IZU1 332 aaPredicted RBP20.57■□□□□ 0.88
SV2A-202ENST00000369146 PCGF6Q9BYE7 350 aa20.52■□□□□ 0.88
SV2A-202ENST00000369146 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
SV2A-202ENST00000369146 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
SV2A-202ENST00000369146 LOC105371045A0A1W2PR82 267 aa20.13■□□□□ 0.81
SV2A-202ENST00000369146 TTBK1Q5TCY1 1321 aaPredicted RBP20.1■□□□□ 0.81
SV2A-202ENST00000369146 ABCC9O60706 1549 aa20.09■□□□□ 0.81
SV2A-202ENST00000369146 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
SV2A-202ENST00000369146 HRCP23327 699 aa20.05■□□□□ 0.8
SV2A-202ENST00000369146 PPARGC1BQ86YN6 1023 aaKnown RBP19.89■□□□□ 0.77
SV2A-202ENST00000369146 RANGAP1P46060 587 aaPredicted RBP19.86■□□□□ 0.77
SV2A-202ENST00000369146 CCDC180Q9P1Z9 1646 aa19.83■□□□□ 0.77
SV2A-202ENST00000369146 TRIM26Q12899 539 aaPredicted RBP19.78■□□□□ 0.76
SV2A-202ENST00000369146 ZEB1P37275 1124 aaPredicted RBP19.75■□□□□ 0.75
SV2A-202ENST00000369146 PABPN1Q86U42 306 aaKnown RBP eCLIP19.72■□□□□ 0.75
SV2A-202ENST00000369146 UBTFP17480 764 aaKnown RBP19.69■□□□□ 0.74
SV2A-202ENST00000369146 APLP2Q06481 763 aa19.63■□□□□ 0.73
SV2A-202ENST00000369146 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
SV2A-202ENST00000369146 CCER1Q8TC90 406 aaPredicted RBP19.56■□□□□ 0.72
SV2A-202ENST00000369146 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
SV2A-202ENST00000369146 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
SV2A-202ENST00000369146 CENPBP07199 599 aaPredicted RBP19.25■□□□□ 0.67
SV2A-202ENST00000369146 RSF1Q96T23 1441 aaPredicted RBP19.21■□□□□ 0.67
SV2A-202ENST00000369146 DCAF1Q9Y4B6 1507 aa19.18■□□□□ 0.66
SV2A-202ENST00000369146 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
SV2A-202ENST00000369146 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
SV2A-202ENST00000369146 PELP1Q8IZL8 1130 aaKnown RBP19.08■□□□□ 0.64
SV2A-202ENST00000369146 YTHDC1Q96MU7 727 aaKnown RBP19.05■□□□□ 0.64
SV2A-202ENST00000369146 CECR2Q9BXF3 1484 aa19.03■□□□□ 0.64
SV2A-202ENST00000369146 ITGAEP38570 1179 aa19.02■□□□□ 0.64
SV2A-202ENST00000369146 CSRNP3Q8WYN3 585 aa18.94■□□□□ 0.62
SV2A-202ENST00000369146 NACADO15069 1562 aa18.92■□□□□ 0.62
SV2A-202ENST00000369146 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
SV2A-202ENST00000369146 DIEXFQ68CQ4 756 aaKnown RBP18.9■□□□□ 0.62
SV2A-202ENST00000369146 MROH2BQ7Z745 1585 aa18.77■□□□□ 0.6
SV2A-202ENST00000369146 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
SV2A-202ENST00000369146 GTF3C3Q9Y5Q9 886 aa18.63■□□□□ 0.57
SV2A-202ENST00000369146 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
SV2A-202ENST00000369146 ACIN1Q9UKV3 1341 aaKnown RBP18.58■□□□□ 0.56
SV2A-202ENST00000369146 FAM50AQ14320 339 aaKnown RBP18.57■□□□□ 0.56
SV2A-202ENST00000369146 ZNF316A6NFI3 1004 aaPredicted RBP18.56■□□□□ 0.56
SV2A-202ENST00000369146 WIZO95785 1651 aa18.56■□□□□ 0.56
SV2A-202ENST00000369146 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
SV2A-202ENST00000369146 SOGA1O94964 1423 aa18.48■□□□□ 0.55
SV2A-202ENST00000369146 ABCC8Q09428 1581 aa18.48■□□□□ 0.55
SV2A-202ENST00000369146 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
SV2A-202ENST00000369146 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
SV2A-202ENST00000369146 CEP162Q5TB80 1403 aa18.47■□□□□ 0.55
SV2A-202ENST00000369146 BAZ1BQ9UIG0 1483 aaKnown RBP18.45■□□□□ 0.54
SV2A-202ENST00000369146 NEUROD1Q13562 356 aa18.42■□□□□ 0.54
SV2A-202ENST00000369146 ARID3CA6NKF2 412 aa18.41■□□□□ 0.54
SV2A-202ENST00000369146 NEFLP07196 543 aa18.38■□□□□ 0.53
SV2A-202ENST00000369146 CLIP1P30622 1438 aa18.37■□□□□ 0.53
SV2A-202ENST00000369146 MYT1Q01538 1121 aa18.35■□□□□ 0.53
SV2A-202ENST00000369146 GOLGA3Q08378 1498 aa18.31■□□□□ 0.52
SV2A-202ENST00000369146 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
SV2A-202ENST00000369146 FBLN2P98095 1184 aa18.29■□□□□ 0.52
SV2A-202ENST00000369146 CNGB1Q14028 1251 aaPredicted RBP18.28■□□□□ 0.52
SV2A-202ENST00000369146 EEA1Q15075 1411 aa18.28■□□□□ 0.52
SV2A-202ENST00000369146 TOP2AP11388 1531 aaKnown RBP18.24■□□□□ 0.51
SV2A-202ENST00000369146 POLR3GLQ9BT43 218 aa18.23■□□□□ 0.51
SV2A-202ENST00000369146 TRIM52Q96A61 297 aa18.22■□□□□ 0.51
SV2A-202ENST00000369146 SMARCA4P51532 1647 aa18.19■□□□□ 0.5
SV2A-202ENST00000369146 RUSC2Q8N2Y8 1516 aa18.19■□□□□ 0.5
SV2A-202ENST00000369146 CEP164Q9UPV0 1460 aa18.17■□□□□ 0.5
SV2A-202ENST00000369146 MIER1Q8N108 512 aa18.17■□□□□ 0.5
SV2A-202ENST00000369146 ERICH6Q7L0X2 663 aa18.15■□□□□ 0.5
SV2A-202ENST00000369146 KIF27Q86VH2 1401 aa18.09■□□□□ 0.49
SV2A-202ENST00000369146 ATAD2BQ9ULI0 1458 aa18.08■□□□□ 0.49
SV2A-202ENST00000369146 BCANQ96GW7 911 aa18.07■□□□□ 0.48
SV2A-202ENST00000369146 MYT1LQ9UL68 1186 aa18.04■□□□□ 0.48
SV2A-202ENST00000369146 SMARCA2P51531 1590 aa18.03■□□□□ 0.48
SV2A-202ENST00000369146 CHIC2Q9UKJ5 165 aa18.01■□□□□ 0.47
SV2A-202ENST00000369146 ZNF326Q5BKZ1 582 aaKnown RBP17.99■□□□□ 0.47
SV2A-202ENST00000369146 KANK4Q5T7N3 995 aaPredicted RBP17.99■□□□□ 0.47
SV2A-202ENST00000369146 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
SV2A-202ENST00000369146 CUX2O14529 1486 aa17.97■□□□□ 0.47
SV2A-202ENST00000369146 ANP32CO43423 234 aa17.96■□□□□ 0.47
SV2A-202ENST00000369146 HIRIP3Q9BW71 556 aaPredicted RBP17.96■□□□□ 0.47
SV2A-202ENST00000369146 RAPGEF2Q9Y4G8 1499 aa17.94■□□□□ 0.46
SV2A-202ENST00000369146 VPS8Q8N3P4 1428 aa17.92■□□□□ 0.46
SV2A-202ENST00000369146 MTUS2Q5JR59 1369 aa17.91■□□□□ 0.46
SV2A-202ENST00000369146 DDX10Q13206 875 aaKnown RBP17.9■□□□□ 0.46
SV2A-202ENST00000369146 CARMIL1Q5VZK9 1371 aa17.9■□□□□ 0.46
SV2A-202ENST00000369146 RRP7BPQ9NSQ0 103 aa17.83■□□□□ 0.44
SV2A-202ENST00000369146 TONSLQ96HA7 1378 aa17.81■□□□□ 0.44
SV2A-202ENST00000369146 CLSPNQ9HAW4 1339 aa17.81■□□□□ 0.44
SV2A-202ENST00000369146 SIN3AQ96ST3 1273 aa17.8■□□□□ 0.44
SV2A-202ENST00000369146 FKBP8Q14318 412 aa17.79■□□□□ 0.44
SV2A-202ENST00000369146 CDK11AQ9UQ88 783 aaPredicted RBP17.78■□□□□ 0.44
SV2A-202ENST00000369146 CADPSQ9ULU8 1353 aa17.77■□□□□ 0.44
SV2A-202ENST00000369146 TDRD9Q8NDG6 1382 aaKnown RBP17.77■□□□□ 0.44
SV2A-202ENST00000369146 CHMP7Q8WUX9 453 aaPredicted RBP17.77■□□□□ 0.44
SV2A-202ENST00000369146 CCNB3Q8WWL7 1395 aa17.76■□□□□ 0.43
SV2A-202ENST00000369146 SYNJ1O43426 1573 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms