RNA–Protein interactions for RNA: ENST00000409750.5

RGPD8-203, Transcript of RANBP2-like and GRIP domain containing 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD8, Length 5,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD8-203ENST00000409750 NISCHQ9Y2I1 1504 aa22.81■■□□□ 1.24
RGPD8-203ENST00000409750 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
RGPD8-203ENST00000409750 SUPT5HO00267 1087 aaKnown RBP20.77■□□□□ 0.92
RGPD8-203ENST00000409750 SHROOM4Q9ULL8 1493 aa20.7■□□□□ 0.9
RGPD8-203ENST00000409750 APLP2Q06481 763 aa19.68■□□□□ 0.74
RGPD8-203ENST00000409750 FAM9AQ8IZU1 332 aaPredicted RBP19.64■□□□□ 0.73
RGPD8-203ENST00000409750 EHMT2Q96KQ7 1210 aa19.56■□□□□ 0.72
RGPD8-203ENST00000409750 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
RGPD8-203ENST00000409750 ABCC9O60706 1549 aa19.32■□□□□ 0.68
RGPD8-203ENST00000409750 CCDC180Q9P1Z9 1646 aa19.24■□□□□ 0.67
RGPD8-203ENST00000409750 UBTFP17480 764 aaKnown RBP19.12■□□□□ 0.65
RGPD8-203ENST00000409750 ZEB1P37275 1124 aaPredicted RBP18.99■□□□□ 0.63
RGPD8-203ENST00000409750 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
RGPD8-203ENST00000409750 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
RGPD8-203ENST00000409750 PCGF6Q9BYE7 350 aa18.96■□□□□ 0.63
RGPD8-203ENST00000409750 ATP1B4Q9UN42 357 aaPredicted RBP18.89■□□□□ 0.62
RGPD8-203ENST00000409750 TTBK1Q5TCY1 1321 aaPredicted RBP18.89■□□□□ 0.61
RGPD8-203ENST00000409750 PABPN1Q86U42 306 aaKnown RBP eCLIP18.84■□□□□ 0.61
RGPD8-203ENST00000409750 CHIC1Q5VXU3 224 aa18.82■□□□□ 0.6
RGPD8-203ENST00000409750 PELP1Q8IZL8 1130 aaKnown RBP18.82■□□□□ 0.6
RGPD8-203ENST00000409750 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
RGPD8-203ENST00000409750 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
RGPD8-203ENST00000409750 TRIM26Q12899 539 aaPredicted RBP18.62■□□□□ 0.57
RGPD8-203ENST00000409750 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
RGPD8-203ENST00000409750 NACADO15069 1562 aa18.51■□□□□ 0.55
RGPD8-203ENST00000409750 LOC105371045A0A1W2PR82 267 aa18.43■□□□□ 0.54
RGPD8-203ENST00000409750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.42■□□□□ 0.54
RGPD8-203ENST00000409750 HNRNPUL2Q1KMD3 747 aaKnown RBP18.42■□□□□ 0.54
RGPD8-203ENST00000409750 CENPBP07199 599 aaPredicted RBP18.41■□□□□ 0.54
RGPD8-203ENST00000409750 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.53
RGPD8-203ENST00000409750 PPARGC1BQ86YN6 1023 aaKnown RBP18.33■□□□□ 0.52
RGPD8-203ENST00000409750 MYT1LQ9UL68 1186 aa18.2■□□□□ 0.5
RGPD8-203ENST00000409750 ITGAEP38570 1179 aa18.19■□□□□ 0.5
RGPD8-203ENST00000409750 CSRNP3Q8WYN3 585 aa18.15■□□□□ 0.5
RGPD8-203ENST00000409750 HRCP23327 699 aa18.12■□□□□ 0.49
RGPD8-203ENST00000409750 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
RGPD8-203ENST00000409750 FAM50AQ14320 339 aaKnown RBP18.01■□□□□ 0.47
RGPD8-203ENST00000409750 NEFLP07196 543 aa18.01■□□□□ 0.47
RGPD8-203ENST00000409750 BAZ1AQ9NRL2 1556 aaPredicted RBP17.98■□□□□ 0.47
RGPD8-203ENST00000409750 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
RGPD8-203ENST00000409750 FBLN2P98095 1184 aa17.97■□□□□ 0.47
RGPD8-203ENST00000409750 BAZ1BQ9UIG0 1483 aaKnown RBP17.94■□□□□ 0.46
RGPD8-203ENST00000409750 EEA1Q15075 1411 aa17.89■□□□□ 0.45
RGPD8-203ENST00000409750 CDK11AQ9UQ88 783 aaPredicted RBP17.88■□□□□ 0.45
RGPD8-203ENST00000409750 TRIM52Q96A61 297 aa17.84■□□□□ 0.45
RGPD8-203ENST00000409750 YTHDC1Q96MU7 727 aaKnown RBP17.81■□□□□ 0.44
RGPD8-203ENST00000409750 POLR3GLQ9BT43 218 aa17.76■□□□□ 0.43
RGPD8-203ENST00000409750 ERICH6Q7L0X2 663 aa17.74■□□□□ 0.43
RGPD8-203ENST00000409750 P3H3Q8IVL6 736 aa17.74■□□□□ 0.43
RGPD8-203ENST00000409750 WRNQ14191 1432 aaPredicted RBP eCLIP17.73■□□□□ 0.43
RGPD8-203ENST00000409750 SMARCA2P51531 1590 aa17.67■□□□□ 0.42
RGPD8-203ENST00000409750 GOLGA3Q08378 1498 aa17.67■□□□□ 0.42
RGPD8-203ENST00000409750 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
RGPD8-203ENST00000409750 KIF27Q86VH2 1401 aa17.62■□□□□ 0.41
RGPD8-203ENST00000409750 NEUROD1Q13562 356 aa17.61■□□□□ 0.41
RGPD8-203ENST00000409750 DIEXFQ68CQ4 756 aaKnown RBP17.6■□□□□ 0.41
RGPD8-203ENST00000409750 CLIP1P30622 1438 aa17.59■□□□□ 0.41
RGPD8-203ENST00000409750 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
RGPD8-203ENST00000409750 NPM1P06748 294 aaKnown RBP eCLIP17.56■□□□□ 0.4
RGPD8-203ENST00000409750 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
RGPD8-203ENST00000409750 ARID3CA6NKF2 412 aa17.52■□□□□ 0.4
RGPD8-203ENST00000409750 ZNF777Q9ULD5 760 aaPredicted RBP17.52■□□□□ 0.4
RGPD8-203ENST00000409750 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.4
RGPD8-203ENST00000409750 SLC4A1APQ9BWU0 796 aaKnown RBP17.51■□□□□ 0.39
RGPD8-203ENST00000409750 ACIN1Q9UKV3 1341 aaKnown RBP17.48■□□□□ 0.39
RGPD8-203ENST00000409750 TNIKQ9UKE5 1360 aa17.48■□□□□ 0.39
RGPD8-203ENST00000409750 TOP2AP11388 1531 aaKnown RBP17.47■□□□□ 0.39
RGPD8-203ENST00000409750 MTUS2Q5JR59 1369 aa17.47■□□□□ 0.39
RGPD8-203ENST00000409750 ERCC6Q03468 1493 aa17.47■□□□□ 0.39
RGPD8-203ENST00000409750 CEP162Q5TB80 1403 aa17.46■□□□□ 0.38
RGPD8-203ENST00000409750 ANP32CO43423 234 aa17.44■□□□□ 0.38
RGPD8-203ENST00000409750 ZNF316A6NFI3 1004 aaPredicted RBP17.44■□□□□ 0.38
RGPD8-203ENST00000409750 ZNF326Q5BKZ1 582 aaKnown RBP17.43■□□□□ 0.38
RGPD8-203ENST00000409750 CCDC88BA6NC98 1476 aa17.42■□□□□ 0.38
RGPD8-203ENST00000409750 PDS5BQ9NTI5 1447 aa17.37■□□□□ 0.37
RGPD8-203ENST00000409750 TONSLQ96HA7 1378 aa17.37■□□□□ 0.37
RGPD8-203ENST00000409750 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
RGPD8-203ENST00000409750 ESF1Q9H501 851 aaKnown RBP17.34■□□□□ 0.37
RGPD8-203ENST00000409750 TSPY4P0CV99 314 aa17.34■□□□□ 0.37
RGPD8-203ENST00000409750 TSPY10P0CW01 314 aa17.34■□□□□ 0.37
RGPD8-203ENST00000409750 SMARCA4P51532 1647 aa17.33■□□□□ 0.36
RGPD8-203ENST00000409750 CUX2O14529 1486 aa17.29■□□□□ 0.36
RGPD8-203ENST00000409750 DAXXQ9UER7 740 aaPredicted RBP17.29■□□□□ 0.36
RGPD8-203ENST00000409750 WIZO95785 1651 aa17.29■□□□□ 0.36
RGPD8-203ENST00000409750 FHAD1B1AJZ9 1412 aa17.28■□□□□ 0.36
RGPD8-203ENST00000409750 PLEKHD1A6NEE1 506 aa17.28■□□□□ 0.36
RGPD8-203ENST00000409750 ATAD2BQ9ULI0 1458 aa17.26■□□□□ 0.35
RGPD8-203ENST00000409750 CARMIL1Q5VZK9 1371 aa17.26■□□□□ 0.35
RGPD8-203ENST00000409750 BCANQ96GW7 911 aa17.22■□□□□ 0.35
RGPD8-203ENST00000409750 CADPSQ9ULU8 1353 aa17.21■□□□□ 0.35
RGPD8-203ENST00000409750 CHIC2Q9UKJ5 165 aa17.19■□□□□ 0.34
RGPD8-203ENST00000409750 NEFMP07197 916 aa17.18■□□□□ 0.34
RGPD8-203ENST00000409750 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
RGPD8-203ENST00000409750 SOGA1O94964 1423 aa17.16■□□□□ 0.34
RGPD8-203ENST00000409750 ABCC8Q09428 1581 aa17.15■□□□□ 0.34
RGPD8-203ENST00000409750 MYT1Q01538 1121 aa17.12■□□□□ 0.33
RGPD8-203ENST00000409750 EIF4G1Q04637 1599 aaKnown RBP17.11■□□□□ 0.33
RGPD8-203ENST00000409750 CHGAP10645 457 aaKnown RBP17.1■□□□□ 0.33
RGPD8-203ENST00000409750 CFDP1Q9UEE9 299 aaPredicted RBP17.09■□□□□ 0.33
RGPD8-203ENST00000409750 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms