RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 NISCHQ9Y2I1 1504 aa24.92■■□□□ 1.58
TNFRSF8-203ENST00000417814 SHROOM4Q9ULL8 1493 aa23.4■■□□□ 1.34
TNFRSF8-203ENST00000417814 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
TNFRSF8-203ENST00000417814 DCAF8L2P0C7V8 631 aa23.16■■□□□ 1.3
TNFRSF8-203ENST00000417814 EHMT2Q96KQ7 1210 aa22.25■■□□□ 1.15
TNFRSF8-203ENST00000417814 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
TNFRSF8-203ENST00000417814 PPARGC1BQ86YN6 1023 aaKnown RBP21.92■■□□□ 1.1
TNFRSF8-203ENST00000417814 LOC105371045A0A1W2PR82 267 aa21.84■■□□□ 1.09
TNFRSF8-203ENST00000417814 CHIC1Q5VXU3 224 aa21.77■■□□□ 1.08
TNFRSF8-203ENST00000417814 FAM9AQ8IZU1 332 aaPredicted RBP21.76■■□□□ 1.07
TNFRSF8-203ENST00000417814 HRCP23327 699 aa21.55■■□□□ 1.04
TNFRSF8-203ENST00000417814 MYO15BQ96JP2 1530 aa21.46■■□□□ 1.03
TNFRSF8-203ENST00000417814 TTBK1Q5TCY1 1321 aaPredicted RBP21.44■■□□□ 1.02
TNFRSF8-203ENST00000417814 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
TNFRSF8-203ENST00000417814 TRIM26Q12899 539 aaPredicted RBP20.91■□□□□ 0.94
TNFRSF8-203ENST00000417814 ZCCHC6Q5VYS8 1495 aaKnown RBP20.91■□□□□ 0.94
TNFRSF8-203ENST00000417814 RANGAP1P46060 587 aaPredicted RBP20.78■□□□□ 0.92
TNFRSF8-203ENST00000417814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.75■□□□□ 0.91
TNFRSF8-203ENST00000417814 CCER1Q8TC90 406 aaPredicted RBP20.65■□□□□ 0.9
TNFRSF8-203ENST00000417814 PELP1Q8IZL8 1130 aaKnown RBP20.6■□□□□ 0.89
TNFRSF8-203ENST00000417814 YTHDC1Q96MU7 727 aaKnown RBP20.5■□□□□ 0.87
TNFRSF8-203ENST00000417814 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
TNFRSF8-203ENST00000417814 ABCC9O60706 1549 aa20.37■□□□□ 0.85
TNFRSF8-203ENST00000417814 ZEB1P37275 1124 aaPredicted RBP20.33■□□□□ 0.84
TNFRSF8-203ENST00000417814 SCRIBQ14160 1630 aa20.32■□□□□ 0.84
TNFRSF8-203ENST00000417814 SCAF1Q9H7N4 1312 aaKnown RBP20.31■□□□□ 0.84
TNFRSF8-203ENST00000417814 DCAF1Q9Y4B6 1507 aa20.3■□□□□ 0.84
TNFRSF8-203ENST00000417814 HNRNPUL2Q1KMD3 747 aaKnown RBP20.26■□□□□ 0.83
TNFRSF8-203ENST00000417814 RSF1Q96T23 1441 aaPredicted RBP20.19■□□□□ 0.82
TNFRSF8-203ENST00000417814 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
TNFRSF8-203ENST00000417814 CCDC180Q9P1Z9 1646 aa20.15■□□□□ 0.82
TNFRSF8-203ENST00000417814 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
TNFRSF8-203ENST00000417814 NEUROD1Q13562 356 aa20.1■□□□□ 0.81
TNFRSF8-203ENST00000417814 GTF3C3Q9Y5Q9 886 aa20.08■□□□□ 0.81
TNFRSF8-203ENST00000417814 CECR2Q9BXF3 1484 aa20.04■□□□□ 0.8
TNFRSF8-203ENST00000417814 RB1CC1Q8TDY2 1594 aa19.98■□□□□ 0.79
TNFRSF8-203ENST00000417814 ITGAEP38570 1179 aa19.96■□□□□ 0.79
TNFRSF8-203ENST00000417814 APLP2Q06481 763 aa19.93■□□□□ 0.78
TNFRSF8-203ENST00000417814 CENPBP07199 599 aaPredicted RBP19.91■□□□□ 0.78
TNFRSF8-203ENST00000417814 ACIN1Q9UKV3 1341 aaKnown RBP19.89■□□□□ 0.77
TNFRSF8-203ENST00000417814 MYT1Q01538 1121 aa19.84■□□□□ 0.77
TNFRSF8-203ENST00000417814 ATP1B4Q9UN42 357 aaPredicted RBP19.77■□□□□ 0.76
TNFRSF8-203ENST00000417814 MROH2BQ7Z745 1585 aa19.72■□□□□ 0.75
TNFRSF8-203ENST00000417814 CSRNP3Q8WYN3 585 aa19.72■□□□□ 0.75
TNFRSF8-203ENST00000417814 MIER1Q8N108 512 aa19.69■□□□□ 0.74
TNFRSF8-203ENST00000417814 SOGA1O94964 1423 aa19.65■□□□□ 0.74
TNFRSF8-203ENST00000417814 ZNF316A6NFI3 1004 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF8-203ENST00000417814 ABCC8Q09428 1581 aa19.63■□□□□ 0.73
TNFRSF8-203ENST00000417814 CCDC88BA6NC98 1476 aa19.57■□□□□ 0.72
TNFRSF8-203ENST00000417814 WIZO95785 1651 aa19.57■□□□□ 0.72
TNFRSF8-203ENST00000417814 RUSC2Q8N2Y8 1516 aa19.53■□□□□ 0.72
TNFRSF8-203ENST00000417814 CEP162Q5TB80 1403 aa19.52■□□□□ 0.72
TNFRSF8-203ENST00000417814 BCANQ96GW7 911 aa19.52■□□□□ 0.71
TNFRSF8-203ENST00000417814 HIRIP3Q9BW71 556 aaPredicted RBP19.44■□□□□ 0.7
TNFRSF8-203ENST00000417814 P3H3Q8IVL6 736 aa19.43■□□□□ 0.7
TNFRSF8-203ENST00000417814 CNGB1Q14028 1251 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF8-203ENST00000417814 FAM50AQ14320 339 aaKnown RBP19.27■□□□□ 0.68
TNFRSF8-203ENST00000417814 KANK4Q5T7N3 995 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF8-203ENST00000417814 KCNH8Q96L42 1107 aa19.22■□□□□ 0.67
TNFRSF8-203ENST00000417814 CLIP1P30622 1438 aa19.2■□□□□ 0.66
TNFRSF8-203ENST00000417814 TNIKQ9UKE5 1360 aa19.19■□□□□ 0.66
TNFRSF8-203ENST00000417814 ARID3CA6NKF2 412 aa19.16■□□□□ 0.66
TNFRSF8-203ENST00000417814 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
TNFRSF8-203ENST00000417814 WRNQ14191 1432 aaPredicted RBP eCLIP19.13■□□□□ 0.65
TNFRSF8-203ENST00000417814 TRIM52Q96A61 297 aa19.08■□□□□ 0.65
TNFRSF8-203ENST00000417814 SIN3AQ96ST3 1273 aa19.08■□□□□ 0.65
TNFRSF8-203ENST00000417814 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
TNFRSF8-203ENST00000417814 NACADO15069 1562 aa19.06■□□□□ 0.64
TNFRSF8-203ENST00000417814 BAZ1AQ9NRL2 1556 aaPredicted RBP19.05■□□□□ 0.64
TNFRSF8-203ENST00000417814 GOLGA3Q08378 1498 aa19.04■□□□□ 0.64
TNFRSF8-203ENST00000417814 IRX6P78412 446 aaPredicted RBP18.98■□□□□ 0.63
TNFRSF8-203ENST00000417814 FKBP8Q14318 412 aa18.98■□□□□ 0.63
TNFRSF8-203ENST00000417814 RAPGEF2Q9Y4G8 1499 aa18.97■□□□□ 0.63
TNFRSF8-203ENST00000417814 POLR3GLQ9BT43 218 aa18.97■□□□□ 0.63
TNFRSF8-203ENST00000417814 SUPT16HQ9Y5B9 1047 aaKnown RBP18.93■□□□□ 0.62
TNFRSF8-203ENST00000417814 SMARCA2P51531 1590 aa18.87■□□□□ 0.61
TNFRSF8-203ENST00000417814 NEFLP07196 543 aa18.86■□□□□ 0.61
TNFRSF8-203ENST00000417814 TOP2AP11388 1531 aaKnown RBP18.85■□□□□ 0.61
TNFRSF8-203ENST00000417814 CHIC2Q9UKJ5 165 aa18.84■□□□□ 0.61
TNFRSF8-203ENST00000417814 CEP164Q9UPV0 1460 aa18.83■□□□□ 0.61
TNFRSF8-203ENST00000417814 VPS8Q8N3P4 1428 aa18.81■□□□□ 0.6
TNFRSF8-203ENST00000417814 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
TNFRSF8-203ENST00000417814 EEA1Q15075 1411 aa18.76■□□□□ 0.59
TNFRSF8-203ENST00000417814 BAZ1BQ9UIG0 1483 aaKnown RBP18.76■□□□□ 0.59
TNFRSF8-203ENST00000417814 DHX57Q6P158 1386 aaKnown RBP18.75■□□□□ 0.59
TNFRSF8-203ENST00000417814 BCL11AQ9H165 835 aa18.71■□□□□ 0.59
TNFRSF8-203ENST00000417814 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
TNFRSF8-203ENST00000417814 ANP32CO43423 234 aa18.7■□□□□ 0.58
TNFRSF8-203ENST00000417814 SYNJ1O43426 1573 aa18.69■□□□□ 0.58
TNFRSF8-203ENST00000417814 TSHZ2Q9NRE2 1034 aa18.67■□□□□ 0.58
TNFRSF8-203ENST00000417814 RRP7BPQ9NSQ0 103 aa18.67■□□□□ 0.58
TNFRSF8-203ENST00000417814 HNRNPUQ00839 825 aaKnown RBP eCLIP18.66■□□□□ 0.58
TNFRSF8-203ENST00000417814 CCNB3Q8WWL7 1395 aa18.63■□□□□ 0.57
TNFRSF8-203ENST00000417814 RAB3GAP2Q9H2M9 1393 aa18.63■□□□□ 0.57
TNFRSF8-203ENST00000417814 FOXD1Q16676 465 aa18.62■□□□□ 0.57
TNFRSF8-203ENST00000417814 FAM9BQ8IZU0 186 aa18.61■□□□□ 0.57
TNFRSF8-203ENST00000417814 ERICH6Q7L0X2 663 aa18.59■□□□□ 0.57
TNFRSF8-203ENST00000417814 ATAD2BQ9ULI0 1458 aa18.57■□□□□ 0.56
TNFRSF8-203ENST00000417814 KIF21BO75037 1637 aa18.57■□□□□ 0.56
TNFRSF8-203ENST00000417814 ARAP1Q96P48 1450 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms