RNA–Protein interactions for RNA: ENST00000323830.3

CPN2-201, Transcript of carboxypeptidase N subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPN2, Length 3,028 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPN2-201ENST00000323830 NISCHQ9Y2I1 1504 aa26.62■■□□□ 1.85
CPN2-201ENST00000323830 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
CPN2-201ENST00000323830 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.16
CPN2-201ENST00000323830 ABCC9O60706 1549 aa22.3■■□□□ 1.16
CPN2-201ENST00000323830 DCAF8L2P0C7V8 631 aa22.22■■□□□ 1.15
CPN2-201ENST00000323830 HRCP23327 699 aa22.04■■□□□ 1.12
CPN2-201ENST00000323830 DCAF1Q9Y4B6 1507 aa21.92■■□□□ 1.1
CPN2-201ENST00000323830 SHROOM4Q9ULL8 1493 aa21.88■■□□□ 1.09
CPN2-201ENST00000323830 SUPT5HO00267 1087 aaKnown RBP21.76■■□□□ 1.07
CPN2-201ENST00000323830 NACADO15069 1562 aa21.7■■□□□ 1.06
CPN2-201ENST00000323830 PPARGC1BQ86YN6 1023 aaKnown RBP21.69■■□□□ 1.06
CPN2-201ENST00000323830 MYO15BQ96JP2 1530 aa21.68■■□□□ 1.06
CPN2-201ENST00000323830 PCGF6Q9BYE7 350 aa21.62■■□□□ 1.05
CPN2-201ENST00000323830 RB1CC1Q8TDY2 1594 aa21.6■■□□□ 1.05
CPN2-201ENST00000323830 SCRIBQ14160 1630 aa21.53■■□□□ 1.04
CPN2-201ENST00000323830 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
CPN2-201ENST00000323830 UNC13AQ9UPW8 1703 aa21.26■□□□□ 0.99
CPN2-201ENST00000323830 PELP1Q8IZL8 1130 aaKnown RBP21.1■□□□□ 0.97
CPN2-201ENST00000323830 PABPN1Q86U42 306 aaKnown RBP eCLIP21■□□□□ 0.95
CPN2-201ENST00000323830 BICRAQ9NZM4 1560 aa20.97■□□□□ 0.95
CPN2-201ENST00000323830 LOC105371045A0A1W2PR82 267 aa20.97■□□□□ 0.95
CPN2-201ENST00000323830 SCAF1Q9H7N4 1312 aaKnown RBP20.91■□□□□ 0.94
CPN2-201ENST00000323830 TRIM26Q12899 539 aaPredicted RBP20.86■□□□□ 0.93
CPN2-201ENST00000323830 CECR2Q9BXF3 1484 aa20.77■□□□□ 0.92
CPN2-201ENST00000323830 MROH2BQ7Z745 1585 aa20.62■□□□□ 0.89
CPN2-201ENST00000323830 ZEB1P37275 1124 aaPredicted RBP20.61■□□□□ 0.89
CPN2-201ENST00000323830 RSF1Q96T23 1441 aaPredicted RBP20.6■□□□□ 0.89
CPN2-201ENST00000323830 BAZ1AQ9NRL2 1556 aaPredicted RBP20.57■□□□□ 0.88
CPN2-201ENST00000323830 SMARCA4P51532 1647 aa20.54■□□□□ 0.88
CPN2-201ENST00000323830 WIZO95785 1651 aa20.49■□□□□ 0.87
CPN2-201ENST00000323830 EIF4G1Q04637 1599 aaKnown RBP20.36■□□□□ 0.85
CPN2-201ENST00000323830 NEUROD1Q13562 356 aa20.33■□□□□ 0.85
CPN2-201ENST00000323830 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.84
CPN2-201ENST00000323830 ATAD2BQ9ULI0 1458 aa20.21■□□□□ 0.83
CPN2-201ENST00000323830 MYT1Q01538 1121 aa20.21■□□□□ 0.83
CPN2-201ENST00000323830 PEG3Q9GZU2 1588 aa20.21■□□□□ 0.83
CPN2-201ENST00000323830 GTF3C3Q9Y5Q9 886 aa20.19■□□□□ 0.82
CPN2-201ENST00000323830 TOP2AP11388 1531 aaKnown RBP20.19■□□□□ 0.82
CPN2-201ENST00000323830 SMARCA2P51531 1590 aa20.18■□□□□ 0.82
CPN2-201ENST00000323830 FAM9AQ8IZU1 332 aaPredicted RBP20.13■□□□□ 0.81
CPN2-201ENST00000323830 CC2D2AQ9P2K1 1620 aa20.13■□□□□ 0.81
CPN2-201ENST00000323830 BAZ1BQ9UIG0 1483 aaKnown RBP20.12■□□□□ 0.81
CPN2-201ENST00000323830 EHMT2Q96KQ7 1210 aa20.1■□□□□ 0.81
CPN2-201ENST00000323830 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
CPN2-201ENST00000323830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.05■□□□□ 0.8
CPN2-201ENST00000323830 NCAPD3P42695 1498 aa20.01■□□□□ 0.79
CPN2-201ENST00000323830 CCDC88BA6NC98 1476 aa20■□□□□ 0.79
CPN2-201ENST00000323830 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
CPN2-201ENST00000323830 CENPBP07199 599 aaPredicted RBP19.98■□□□□ 0.79
CPN2-201ENST00000323830 DIEXFQ68CQ4 756 aaKnown RBP19.98■□□□□ 0.79
CPN2-201ENST00000323830 CCER1Q8TC90 406 aaPredicted RBP19.94■□□□□ 0.78
CPN2-201ENST00000323830 DNAJC5BQ9UF47 199 aa19.79■□□□□ 0.76
CPN2-201ENST00000323830 YTHDC1Q96MU7 727 aaKnown RBP19.7■□□□□ 0.74
CPN2-201ENST00000323830 TTBK1Q5TCY1 1321 aaPredicted RBP19.62■□□□□ 0.73
CPN2-201ENST00000323830 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
CPN2-201ENST00000323830 ZNF316A6NFI3 1004 aaPredicted RBP19.58■□□□□ 0.72
CPN2-201ENST00000323830 CFTRP13569 1480 aa19.55■□□□□ 0.72
CPN2-201ENST00000323830 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.72
CPN2-201ENST00000323830 MIER1Q8N108 512 aa19.52■□□□□ 0.72
CPN2-201ENST00000323830 NESP48681 1621 aa19.52■□□□□ 0.72
CPN2-201ENST00000323830 PRDM2Q13029 1718 aa19.51■□□□□ 0.71
CPN2-201ENST00000323830 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
CPN2-201ENST00000323830 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
CPN2-201ENST00000323830 SYNJ1O43426 1573 aa19.39■□□□□ 0.69
CPN2-201ENST00000323830 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
CPN2-201ENST00000323830 KIF21AQ7Z4S6 1674 aa19.3■□□□□ 0.68
CPN2-201ENST00000323830 CEP162Q5TB80 1403 aa19.3■□□□□ 0.68
CPN2-201ENST00000323830 CUX1P39880 1505 aa19.28■□□□□ 0.68
CPN2-201ENST00000323830 TOP2BQ02880 1626 aa19.27■□□□□ 0.67
CPN2-201ENST00000323830 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
CPN2-201ENST00000323830 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
CPN2-201ENST00000323830 CEP164Q9UPV0 1460 aa19.25■□□□□ 0.67
CPN2-201ENST00000323830 SUPT16HQ9Y5B9 1047 aaKnown RBP19.22■□□□□ 0.67
CPN2-201ENST00000323830 SOGA1O94964 1423 aa19.16■□□□□ 0.66
CPN2-201ENST00000323830 HNRNPUL2Q1KMD3 747 aaKnown RBP19.16■□□□□ 0.66
CPN2-201ENST00000323830 TSHZ2Q9NRE2 1034 aa19.15■□□□□ 0.66
CPN2-201ENST00000323830 DNMBPQ6XZF7 1577 aa19.14■□□□□ 0.65
CPN2-201ENST00000323830 URB2Q14146 1524 aaKnown RBP19.13■□□□□ 0.65
CPN2-201ENST00000323830 ANP32EQ9BTT0 268 aa19.13■□□□□ 0.65
CPN2-201ENST00000323830 RUSC2Q8N2Y8 1516 aa19.12■□□□□ 0.65
CPN2-201ENST00000323830 TOPBP1Q92547 1522 aa19.12■□□□□ 0.65
CPN2-201ENST00000323830 TNIKQ9UKE5 1360 aa19.12■□□□□ 0.65
CPN2-201ENST00000323830 BCL11AQ9H165 835 aa19.12■□□□□ 0.65
CPN2-201ENST00000323830 ERCC6Q03468 1493 aa19.12■□□□□ 0.65
CPN2-201ENST00000323830 FGD5Q6ZNL6 1462 aa19.11■□□□□ 0.65
CPN2-201ENST00000323830 MRC2Q9UBG0 1479 aa19.04■□□□□ 0.64
CPN2-201ENST00000323830 UBTFP17480 764 aaKnown RBP19.03■□□□□ 0.64
CPN2-201ENST00000323830 POLA1P09884 1462 aaPredicted RBP19.02■□□□□ 0.64
CPN2-201ENST00000323830 CLSPNQ9HAW4 1339 aa19.02■□□□□ 0.63
CPN2-201ENST00000323830 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
CPN2-201ENST00000323830 CSRNP3Q8WYN3 585 aa18.99■□□□□ 0.63
CPN2-201ENST00000323830 EEA1Q15075 1411 aa18.96■□□□□ 0.63
CPN2-201ENST00000323830 THOC2Q8NI27 1593 aaKnown RBP18.96■□□□□ 0.63
CPN2-201ENST00000323830 CUX2O14529 1486 aa18.96■□□□□ 0.63
CPN2-201ENST00000323830 WDR62O43379 1518 aa18.94■□□□□ 0.62
CPN2-201ENST00000323830 KIF27Q86VH2 1401 aa18.92■□□□□ 0.62
CPN2-201ENST00000323830 WDR97A6NE52 1622 aa18.88■□□□□ 0.61
CPN2-201ENST00000323830 GOLGA3Q08378 1498 aa18.88■□□□□ 0.61
CPN2-201ENST00000323830 ABCA10Q8WWZ4 1543 aa18.87■□□□□ 0.61
CPN2-201ENST00000323830 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms