RNA–Protein interactions for RNA: ENST00000376630.4

HLA-E-201, Transcript of major histocompatibility complex, class I, E, humanhuman

APPRIS P1 BASIC

Gene HLA-E, Length 2,601 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-201ENST00000376630 NISCHQ9Y2I1 1504 aa28.87■■■□□ 2.21
HLA-E-201ENST00000376630 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
HLA-E-201ENST00000376630 ABCC9O60706 1549 aa24.5■■□□□ 1.51
HLA-E-201ENST00000376630 DCAF8L2P0C7V8 631 aa24.31■■□□□ 1.48
HLA-E-201ENST00000376630 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
HLA-E-201ENST00000376630 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
HLA-E-201ENST00000376630 NACADO15069 1562 aa23.64■■□□□ 1.37
HLA-E-201ENST00000376630 SHROOM4Q9ULL8 1493 aa23.57■■□□□ 1.36
HLA-E-201ENST00000376630 MYO15BQ96JP2 1530 aa23.56■■□□□ 1.36
HLA-E-201ENST00000376630 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
HLA-E-201ENST00000376630 SCRIBQ14160 1630 aa23.35■■□□□ 1.33
HLA-E-201ENST00000376630 PABPN1Q86U42 306 aaKnown RBP eCLIP23.12■■□□□ 1.29
HLA-E-201ENST00000376630 UNC13AQ9UPW8 1703 aa23.08■■□□□ 1.28
HLA-E-201ENST00000376630 BICRAQ9NZM4 1560 aa22.91■■□□□ 1.26
HLA-E-201ENST00000376630 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
HLA-E-201ENST00000376630 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
HLA-E-201ENST00000376630 MROH2BQ7Z745 1585 aa22.36■■□□□ 1.17
HLA-E-201ENST00000376630 PELP1Q8IZL8 1130 aaKnown RBP22.35■■□□□ 1.17
HLA-E-201ENST00000376630 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
HLA-E-201ENST00000376630 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
HLA-E-201ENST00000376630 SMARCA4P51532 1647 aa22.26■■□□□ 1.15
HLA-E-201ENST00000376630 EIF4G1Q04637 1599 aaKnown RBP22.26■■□□□ 1.15
HLA-E-201ENST00000376630 WIZO95785 1651 aa22.15■■□□□ 1.14
HLA-E-201ENST00000376630 DNAJC5BQ9UF47 199 aa22.06■■□□□ 1.12
HLA-E-201ENST00000376630 CC2D2AQ9P2K1 1620 aa22.05■■□□□ 1.12
HLA-E-201ENST00000376630 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
HLA-E-201ENST00000376630 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
HLA-E-201ENST00000376630 PEG3Q9GZU2 1588 aa21.92■■□□□ 1.1
HLA-E-201ENST00000376630 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
HLA-E-201ENST00000376630 NCAPD3P42695 1498 aa21.87■■□□□ 1.09
HLA-E-201ENST00000376630 TOP2AP11388 1531 aaKnown RBP21.82■■□□□ 1.08
HLA-E-201ENST00000376630 MYT1Q01538 1121 aa21.78■■□□□ 1.08
HLA-E-201ENST00000376630 HMGXB3Q12766 1538 aa21.75■■□□□ 1.07
HLA-E-201ENST00000376630 HRCP23327 699 aa21.73■■□□□ 1.07
HLA-E-201ENST00000376630 CCDC88BA6NC98 1476 aa21.68■■□□□ 1.06
HLA-E-201ENST00000376630 NESP48681 1621 aa21.39■■□□□ 1.01
HLA-E-201ENST00000376630 CADPSQ9ULU8 1353 aa21.34■■□□□ 1.01
HLA-E-201ENST00000376630 CFTRP13569 1480 aa21.3■■□□□ 1
HLA-E-201ENST00000376630 CHIC1Q5VXU3 224 aa21.17■□□□□ 0.98
HLA-E-201ENST00000376630 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
HLA-E-201ENST00000376630 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
HLA-E-201ENST00000376630 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
HLA-E-201ENST00000376630 PPARGC1BQ86YN6 1023 aaKnown RBP21.08■□□□□ 0.97
HLA-E-201ENST00000376630 PDS5BQ9NTI5 1447 aa21.07■□□□□ 0.96
HLA-E-201ENST00000376630 TRIM41Q8WV44 630 aa21.06■□□□□ 0.96
HLA-E-201ENST00000376630 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
HLA-E-201ENST00000376630 PRDM2Q13029 1718 aa21.01■□□□□ 0.95
HLA-E-201ENST00000376630 WRNQ14191 1432 aaPredicted RBP eCLIP21.01■□□□□ 0.95
HLA-E-201ENST00000376630 CEP164Q9UPV0 1460 aa21.01■□□□□ 0.95
HLA-E-201ENST00000376630 KIF21AQ7Z4S6 1674 aa21■□□□□ 0.95
HLA-E-201ENST00000376630 SCAF1Q9H7N4 1312 aaKnown RBP20.99■□□□□ 0.95
HLA-E-201ENST00000376630 SYNJ1O43426 1573 aa20.93■□□□□ 0.94
HLA-E-201ENST00000376630 CUX1P39880 1505 aa20.91■□□□□ 0.94
HLA-E-201ENST00000376630 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
HLA-E-201ENST00000376630 TOPBP1Q92547 1522 aa20.82■□□□□ 0.92
HLA-E-201ENST00000376630 MRC2Q9UBG0 1479 aa20.82■□□□□ 0.92
HLA-E-201ENST00000376630 FAM9AQ8IZU1 332 aaPredicted RBP20.81■□□□□ 0.92
HLA-E-201ENST00000376630 TOP2BQ02880 1626 aa20.8■□□□□ 0.92
HLA-E-201ENST00000376630 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
HLA-E-201ENST00000376630 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
HLA-E-201ENST00000376630 TTBK1Q5TCY1 1321 aaPredicted RBP20.76■□□□□ 0.91
HLA-E-201ENST00000376630 BIVM-ERCC5R4GMW8 1640 aa20.74■□□□□ 0.91
HLA-E-201ENST00000376630 THOC2Q8NI27 1593 aaKnown RBP20.73■□□□□ 0.91
HLA-E-201ENST00000376630 PCGF6Q9BYE7 350 aa20.72■□□□□ 0.91
HLA-E-201ENST00000376630 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
HLA-E-201ENST00000376630 RAD54L2Q9Y4B4 1467 aa20.72■□□□□ 0.91
HLA-E-201ENST00000376630 SOGA1O94964 1423 aa20.7■□□□□ 0.9
HLA-E-201ENST00000376630 WDR62O43379 1518 aa20.69■□□□□ 0.9
HLA-E-201ENST00000376630 RUSC2Q8N2Y8 1516 aa20.66■□□□□ 0.9
HLA-E-201ENST00000376630 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
HLA-E-201ENST00000376630 CUX2O14529 1486 aa20.61■□□□□ 0.89
HLA-E-201ENST00000376630 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
HLA-E-201ENST00000376630 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.87
HLA-E-201ENST00000376630 TARBP1Q13395 1621 aaKnown RBP20.5■□□□□ 0.87
HLA-E-201ENST00000376630 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.874e-7■■■□□ 15.6
HLA-E-201ENST00000376630 ABCA10Q8WWZ4 1543 aa20.5■□□□□ 0.87
HLA-E-201ENST00000376630 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
HLA-E-201ENST00000376630 IFT140Q96RY7 1462 aa20.48■□□□□ 0.87
HLA-E-201ENST00000376630 LOC105371045A0A1W2PR82 267 aa20.47■□□□□ 0.87
HLA-E-201ENST00000376630 CSRNP3Q8WYN3 585 aa20.46■□□□□ 0.87
HLA-E-201ENST00000376630 WDR97A6NE52 1622 aa20.41■□□□□ 0.86
HLA-E-201ENST00000376630 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
HLA-E-201ENST00000376630 IGF1RP08069 1367 aa20.38■□□□□ 0.85
HLA-E-201ENST00000376630 EEA1Q15075 1411 aa20.36■□□□□ 0.85
HLA-E-201ENST00000376630 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
HLA-E-201ENST00000376630 ABCA5Q8WWZ7 1642 aa20.34■□□□□ 0.85
HLA-E-201ENST00000376630 CARMIL1Q5VZK9 1371 aa20.28■□□□□ 0.84
HLA-E-201ENST00000376630 FBLN2P98095 1184 aa20.27■□□□□ 0.84
HLA-E-201ENST00000376630 GRIN2BQ13224 1484 aa20.27■□□□□ 0.84
HLA-E-201ENST00000376630 RAPGEF2Q9Y4G8 1499 aa20.26■□□□□ 0.83
HLA-E-201ENST00000376630 UBTFP17480 764 aaKnown RBP20.26■□□□□ 0.83
HLA-E-201ENST00000376630 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
HLA-E-201ENST00000376630 ACIN1Q9UKV3 1341 aaKnown RBP20.24■□□□□ 0.83
HLA-E-201ENST00000376630 PBRM1Q86U86 1689 aa20.23■□□□□ 0.83
HLA-E-201ENST00000376630 PRXQ9BXM0 1461 aa20.22■□□□□ 0.83
HLA-E-201ENST00000376630 RANGAP1P46060 587 aaPredicted RBP20.22■□□□□ 0.83
HLA-E-201ENST00000376630 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
HLA-E-201ENST00000376630 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
HLA-E-201ENST00000376630 GOLGA3Q08378 1498 aa20.15■□□□□ 0.82
HLA-E-201ENST00000376630 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms