RNA–Protein interactions for RNA: ENST00000429538.7

PAX8-205, Transcript of paired box 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAX8, Length 4,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-205ENST00000429538 NISCHQ9Y2I1 1504 aa24.72■■□□□ 1.55
PAX8-205ENST00000429538 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
PAX8-205ENST00000429538 SHROOM4Q9ULL8 1493 aa22.21■■□□□ 1.15
PAX8-205ENST00000429538 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
PAX8-205ENST00000429538 ABCC9O60706 1549 aa21.4■■□□□ 1.02
PAX8-205ENST00000429538 PCGF6Q9BYE7 350 aa21.06■□□□□ 0.96
PAX8-205ENST00000429538 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
PAX8-205ENST00000429538 CCDC180Q9P1Z9 1646 aa20.84■□□□□ 0.93
PAX8-205ENST00000429538 HRCP23327 699 aa20.83■□□□□ 0.92
PAX8-205ENST00000429538 ZCCHC6Q5VYS8 1495 aaKnown RBP20.82■□□□□ 0.92
PAX8-205ENST00000429538 PABPN1Q86U42 306 aaKnown RBP eCLIP20.74■□□□□ 0.91
PAX8-205ENST00000429538 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
PAX8-205ENST00000429538 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
PAX8-205ENST00000429538 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
PAX8-205ENST00000429538 FAM9AQ8IZU1 332 aaPredicted RBP20.55■□□□□ 0.88
PAX8-205ENST00000429538 PPARGC1BQ86YN6 1023 aaKnown RBP20.53■□□□□ 0.88
PAX8-205ENST00000429538 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
PAX8-205ENST00000429538 TRIM26Q12899 539 aaPredicted RBP20.34■□□□□ 0.85
PAX8-205ENST00000429538 PELP1Q8IZL8 1130 aaKnown RBP20.27■□□□□ 0.84
PAX8-205ENST00000429538 SCRIBQ14160 1630 aa20.25■□□□□ 0.83
PAX8-205ENST00000429538 ZEB1P37275 1124 aaPredicted RBP20.15■□□□□ 0.82
PAX8-205ENST00000429538 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
PAX8-205ENST00000429538 RB1CC1Q8TDY2 1594 aa20.09■□□□□ 0.81
PAX8-205ENST00000429538 TTBK1Q5TCY1 1321 aaPredicted RBP20.02■□□□□ 0.8
PAX8-205ENST00000429538 NACADO15069 1562 aa20■□□□□ 0.79
PAX8-205ENST00000429538 MYT1Q01538 1121 aa19.93■□□□□ 0.78
PAX8-205ENST00000429538 CCER1Q8TC90 406 aaPredicted RBP19.89■□□□□ 0.77
PAX8-205ENST00000429538 RSF1Q96T23 1441 aaPredicted RBP19.77■□□□□ 0.75
PAX8-205ENST00000429538 RANGAP1P46060 587 aaPredicted RBP19.76■□□□□ 0.75
PAX8-205ENST00000429538 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
PAX8-205ENST00000429538 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.73
PAX8-205ENST00000429538 CENPBP07199 599 aaPredicted RBP19.53■□□□□ 0.72
PAX8-205ENST00000429538 CECR2Q9BXF3 1484 aa19.5■□□□□ 0.71
PAX8-205ENST00000429538 APLP2Q06481 763 aa19.49■□□□□ 0.71
PAX8-205ENST00000429538 DIEXFQ68CQ4 756 aaKnown RBP19.38■□□□□ 0.69
PAX8-205ENST00000429538 YTHDC1Q96MU7 727 aaKnown RBP19.37■□□□□ 0.69
PAX8-205ENST00000429538 ATP1B4Q9UN42 357 aaPredicted RBP19.37■□□□□ 0.69
PAX8-205ENST00000429538 SCAF1Q9H7N4 1312 aaKnown RBP19.32■□□□□ 0.68
PAX8-205ENST00000429538 HNRNPUL2Q1KMD3 747 aaKnown RBP19.3■□□□□ 0.68
PAX8-205ENST00000429538 MROH2BQ7Z745 1585 aa19.28■□□□□ 0.68
PAX8-205ENST00000429538 BAZ1AQ9NRL2 1556 aaPredicted RBP19.24■□□□□ 0.67
PAX8-205ENST00000429538 BAZ1BQ9UIG0 1483 aaKnown RBP19.22■□□□□ 0.67
PAX8-205ENST00000429538 ACIN1Q9UKV3 1341 aaKnown RBP19.21■□□□□ 0.67
PAX8-205ENST00000429538 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
PAX8-205ENST00000429538 GTF3C3Q9Y5Q9 886 aa19.18■□□□□ 0.66
PAX8-205ENST00000429538 WIZO95785 1651 aa19.16■□□□□ 0.66
PAX8-205ENST00000429538 NEUROD1Q13562 356 aa19.13■□□□□ 0.65
PAX8-205ENST00000429538 FBLN2P98095 1184 aa19.09■□□□□ 0.65
PAX8-205ENST00000429538 CEP162Q5TB80 1403 aa19.08■□□□□ 0.65
PAX8-205ENST00000429538 ZNF316A6NFI3 1004 aaPredicted RBP19.07■□□□□ 0.64
PAX8-205ENST00000429538 ABCC8Q09428 1581 aa19.03■□□□□ 0.64
PAX8-205ENST00000429538 CCDC88BA6NC98 1476 aa18.98■□□□□ 0.63
PAX8-205ENST00000429538 SOGA1O94964 1423 aa18.97■□□□□ 0.63
PAX8-205ENST00000429538 TNIKQ9UKE5 1360 aa18.93■□□□□ 0.62
PAX8-205ENST00000429538 ITGAEP38570 1179 aa18.92■□□□□ 0.62
PAX8-205ENST00000429538 ATAD2BQ9ULI0 1458 aa18.89■□□□□ 0.61
PAX8-205ENST00000429538 SMARCA2P51531 1590 aa18.88■□□□□ 0.61
PAX8-205ENST00000429538 EEA1Q15075 1411 aa18.87■□□□□ 0.61
PAX8-205ENST00000429538 GOLGA3Q08378 1498 aa18.87■□□□□ 0.61
PAX8-205ENST00000429538 SMARCA4P51532 1647 aa18.85■□□□□ 0.61
PAX8-205ENST00000429538 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.61
PAX8-205ENST00000429538 WRNQ14191 1432 aaPredicted RBP eCLIP18.82■□□□□ 0.6
PAX8-205ENST00000429538 CLIP1P30622 1438 aa18.81■□□□□ 0.6
PAX8-205ENST00000429538 P3H3Q8IVL6 736 aa18.79■□□□□ 0.6
PAX8-205ENST00000429538 MIER1Q8N108 512 aa18.78■□□□□ 0.6
PAX8-205ENST00000429538 ERCC6Q03468 1493 aa18.76■□□□□ 0.59
PAX8-205ENST00000429538 RUSC2Q8N2Y8 1516 aa18.75■□□□□ 0.59
PAX8-205ENST00000429538 EIF4G1Q04637 1599 aaKnown RBP18.74■□□□□ 0.59
PAX8-205ENST00000429538 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
PAX8-205ENST00000429538 CEP164Q9UPV0 1460 aa18.7■□□□□ 0.58
PAX8-205ENST00000429538 ARID3CA6NKF2 412 aa18.66■□□□□ 0.58
PAX8-205ENST00000429538 DNAJC5BQ9UF47 199 aa18.64■□□□□ 0.57
PAX8-205ENST00000429538 CADPSQ9ULU8 1353 aa18.62■□□□□ 0.57
PAX8-205ENST00000429538 CHMP7Q8WUX9 453 aaPredicted RBP18.59■□□□□ 0.57
PAX8-205ENST00000429538 NCAPD3P42695 1498 aa18.57■□□□□ 0.56
PAX8-205ENST00000429538 PDS5BQ9NTI5 1447 aa18.56■□□□□ 0.56
PAX8-205ENST00000429538 VPS8Q8N3P4 1428 aa18.55■□□□□ 0.56
PAX8-205ENST00000429538 FAM50AQ14320 339 aaKnown RBP18.54■□□□□ 0.56
PAX8-205ENST00000429538 MYT1LQ9UL68 1186 aa18.53■□□□□ 0.56
PAX8-205ENST00000429538 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.55
PAX8-205ENST00000429538 CC2D2AQ9P2K1 1620 aa18.51■□□□□ 0.55
PAX8-205ENST00000429538 NEFLP07196 543 aa18.48■□□□□ 0.55
PAX8-205ENST00000429538 RAPGEF2Q9Y4G8 1499 aa18.46■□□□□ 0.55
PAX8-205ENST00000429538 KIF27Q86VH2 1401 aa18.45■□□□□ 0.54
PAX8-205ENST00000429538 BCANQ96GW7 911 aa18.42■□□□□ 0.54
PAX8-205ENST00000429538 TDRD9Q8NDG6 1382 aaKnown RBP18.41■□□□□ 0.54
PAX8-205ENST00000429538 CUX2O14529 1486 aa18.41■□□□□ 0.54
PAX8-205ENST00000429538 KANK4Q5T7N3 995 aaPredicted RBP18.38■□□□□ 0.53
PAX8-205ENST00000429538 ERICH6Q7L0X2 663 aa18.38■□□□□ 0.53
PAX8-205ENST00000429538 FANCD2Q9BXW9 1451 aa18.38■□□□□ 0.53
PAX8-205ENST00000429538 SYNJ1O43426 1573 aa18.35■□□□□ 0.53
PAX8-205ENST00000429538 NESP48681 1621 aa18.34■□□□□ 0.53
PAX8-205ENST00000429538 CLSPNQ9HAW4 1339 aa18.31■□□□□ 0.52
PAX8-205ENST00000429538 DDX10Q13206 875 aaKnown RBP18.3■□□□□ 0.52
PAX8-205ENST00000429538 KIF21BO75037 1637 aa18.28■□□□□ 0.52
PAX8-205ENST00000429538 BCL11AQ9H165 835 aa18.27■□□□□ 0.52
PAX8-205ENST00000429538 CARMIL1Q5VZK9 1371 aa18.26■□□□□ 0.51
PAX8-205ENST00000429538 CCNB3Q8WWL7 1395 aa18.25■□□□□ 0.51
PAX8-205ENST00000429538 DHX57Q6P158 1386 aaKnown RBP18.25■□□□□ 0.51
PAX8-205ENST00000429538 HMGXB3Q12766 1538 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms