RNA–Protein interactions for RNA: ENST00000431206.6

PSMD13-203, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 2 BASIC

Gene PSMD13, Length 1,591 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-203ENST00000431206 NISCHQ9Y2I1 1504 aa34.64■■■■□ 3.14
PSMD13-203ENST00000431206 CCDC180Q9P1Z9 1646 aa30.36■■■□□ 2.45
PSMD13-203ENST00000431206 ZCCHC6Q5VYS8 1495 aaKnown RBP29.05■■■□□ 2.24
PSMD13-203ENST00000431206 ABCC9O60706 1549 aa29■■■□□ 2.23
PSMD13-203ENST00000431206 DCAF8L2P0C7V8 631 aa28.71■■■□□ 2.19
PSMD13-203ENST00000431206 DCAF1Q9Y4B6 1507 aa28.64■■■□□ 2.17
PSMD13-203ENST00000431206 MYO15BQ96JP2 1530 aa28.41■■■□□ 2.14
PSMD13-203ENST00000431206 NACADO15069 1562 aa28.34■■■□□ 2.13
PSMD13-203ENST00000431206 RB1CC1Q8TDY2 1594 aa28.19■■■□□ 2.1
PSMD13-203ENST00000431206 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
PSMD13-203ENST00000431206 SCRIBQ14160 1630 aa27.9■■■□□ 2.06
PSMD13-203ENST00000431206 UNC13AQ9UPW8 1703 aa27.59■■■□□ 2.01
PSMD13-203ENST00000431206 BICRAQ9NZM4 1560 aa27.33■■□□□ 1.97
PSMD13-203ENST00000431206 PABPN1Q86U42 306 aaKnown RBP eCLIP27.27■■□□□ 1.96
PSMD13-203ENST00000431206 CECR2Q9BXF3 1484 aa26.95■■□□□ 1.9
PSMD13-203ENST00000431206 SUPT5HO00267 1087 aaKnown RBP26.82■■□□□ 1.88
PSMD13-203ENST00000431206 BAZ1AQ9NRL2 1556 aaPredicted RBP26.78■■□□□ 1.88
PSMD13-203ENST00000431206 MROH2BQ7Z745 1585 aa26.76■■□□□ 1.87
PSMD13-203ENST00000431206 RSF1Q96T23 1441 aaPredicted RBP26.75■■□□□ 1.87
PSMD13-203ENST00000431206 SMARCA4P51532 1647 aa26.71■■□□□ 1.87
PSMD13-203ENST00000431206 EIF4G1Q04637 1599 aaKnown RBP26.55■■□□□ 1.84
PSMD13-203ENST00000431206 WIZO95785 1651 aa26.53■■□□□ 1.84
PSMD13-203ENST00000431206 PEG3Q9GZU2 1588 aa26.38■■□□□ 1.81
PSMD13-203ENST00000431206 ATAD2BQ9ULI0 1458 aa26.34■■□□□ 1.81
PSMD13-203ENST00000431206 SMARCA2P51531 1590 aa26.32■■□□□ 1.8
PSMD13-203ENST00000431206 TOP2AP11388 1531 aaKnown RBP26.25■■□□□ 1.79
PSMD13-203ENST00000431206 CC2D2AQ9P2K1 1620 aa26.23■■□□□ 1.79
PSMD13-203ENST00000431206 BAZ1BQ9UIG0 1483 aaKnown RBP26.18■■□□□ 1.78
PSMD13-203ENST00000431206 NCAPD3P42695 1498 aa26.15■■□□□ 1.78
PSMD13-203ENST00000431206 HMGXB3Q12766 1538 aa26.11■■□□□ 1.77
PSMD13-203ENST00000431206 CCDC88BA6NC98 1476 aa25.96■■□□□ 1.75
PSMD13-203ENST00000431206 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
PSMD13-203ENST00000431206 CFTRP13569 1480 aa25.49■■□□□ 1.67
PSMD13-203ENST00000431206 CHIC1Q5VXU3 224 aa25.49■■□□□ 1.67
PSMD13-203ENST00000431206 CADPSQ9ULU8 1353 aa25.46■■□□□ 1.67
PSMD13-203ENST00000431206 NESP48681 1621 aa25.36■■□□□ 1.65
PSMD13-203ENST00000431206 PRDM2Q13029 1718 aa25.35■■□□□ 1.65
PSMD13-203ENST00000431206 ABCC8Q09428 1581 aa25.34■■□□□ 1.65
PSMD13-203ENST00000431206 LAMC3Q9Y6N6 1575 aa25.33■■□□□ 1.65
PSMD13-203ENST00000431206 TRIM41Q8WV44 630 aa25.23■■□□□ 1.63
PSMD13-203ENST00000431206 WRNQ14191 1432 aaPredicted RBP eCLIP25.2■■□□□ 1.62
PSMD13-203ENST00000431206 FANCD2Q9BXW9 1451 aa25.2■■□□□ 1.62
PSMD13-203ENST00000431206 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
PSMD13-203ENST00000431206 SYNJ1O43426 1573 aa25.13■■□□□ 1.61
PSMD13-203ENST00000431206 CEP164Q9UPV0 1460 aa25.08■■□□□ 1.61
PSMD13-203ENST00000431206 KIF21AQ7Z4S6 1674 aa25.05■■□□□ 1.6
PSMD13-203ENST00000431206 CUX1P39880 1505 aa25.05■■□□□ 1.6
PSMD13-203ENST00000431206 TOP2BQ02880 1626 aa25.03■■□□□ 1.6
PSMD13-203ENST00000431206 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
PSMD13-203ENST00000431206 DNMBPQ6XZF7 1577 aa24.92■■□□□ 1.58
PSMD13-203ENST00000431206 URB2Q14146 1524 aaKnown RBP24.91■■□□□ 1.58
PSMD13-203ENST00000431206 ERCC6Q03468 1493 aa24.9■■□□□ 1.58
PSMD13-203ENST00000431206 TOPBP1Q92547 1522 aa24.89■■□□□ 1.58
PSMD13-203ENST00000431206 MRC2Q9UBG0 1479 aa24.85■■□□□ 1.57
PSMD13-203ENST00000431206 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.57
PSMD13-203ENST00000431206 FAM9AQ8IZU1 332 aaPredicted RBP24.78■■□□□ 1.56
PSMD13-203ENST00000431206 SOGA1O94964 1423 aa24.78■■□□□ 1.56
PSMD13-203ENST00000431206 POLA1P09884 1462 aaPredicted RBP24.75■■□□□ 1.55
PSMD13-203ENST00000431206 THOC2Q8NI27 1593 aaKnown RBP24.74■■□□□ 1.55
PSMD13-203ENST00000431206 WDR62O43379 1518 aa24.73■■□□□ 1.55
PSMD13-203ENST00000431206 RUSC2Q8N2Y8 1516 aa24.7■■□□□ 1.55
PSMD13-203ENST00000431206 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
PSMD13-203ENST00000431206 EEA1Q15075 1411 aa24.66■■□□□ 1.54
PSMD13-203ENST00000431206 CUX2O14529 1486 aa24.6■■□□□ 1.53
PSMD13-203ENST00000431206 KIF27Q86VH2 1401 aa24.59■■□□□ 1.53
PSMD13-203ENST00000431206 ABCA10Q8WWZ4 1543 aa24.59■■□□□ 1.53
PSMD13-203ENST00000431206 WDR97A6NE52 1622 aa24.56■■□□□ 1.52
PSMD13-203ENST00000431206 CSRNP3Q8WYN3 585 aa24.54■■□□□ 1.52
PSMD13-203ENST00000431206 TARBP1Q13395 1621 aaKnown RBP24.54■■□□□ 1.52
PSMD13-203ENST00000431206 LOC105371045A0A1W2PR82 267 aa24.5■■□□□ 1.51
PSMD13-203ENST00000431206 IFT140Q96RY7 1462 aa24.49■■□□□ 1.51
PSMD13-203ENST00000431206 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
PSMD13-203ENST00000431206 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
PSMD13-203ENST00000431206 ABCA5Q8WWZ7 1642 aa24.43■■□□□ 1.5
PSMD13-203ENST00000431206 IGF1RP08069 1367 aa24.38■■□□□ 1.49
PSMD13-203ENST00000431206 GAPVD1Q14C86 1478 aa24.38■■□□□ 1.49
PSMD13-203ENST00000431206 KIF21BO75037 1637 aa24.38■■□□□ 1.49
PSMD13-203ENST00000431206 ZNF608Q9ULD9 1512 aaPredicted RBP24.37■■□□□ 1.49
PSMD13-203ENST00000431206 AQRO60306 1485 aaKnown RBP eCLIP24.34■■□□□ 1.492e-6■■■■□ 24.1
PSMD13-203ENST00000431206 PRXQ9BXM0 1461 aa24.34■■□□□ 1.49
PSMD13-203ENST00000431206 GOLGA3Q08378 1498 aa24.32■■□□□ 1.48
PSMD13-203ENST00000431206 RAPGEF2Q9Y4G8 1499 aa24.3■■□□□ 1.48
PSMD13-203ENST00000431206 EIF4G3O43432 1585 aaKnown RBP24.3■■□□□ 1.48
PSMD13-203ENST00000431206 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
PSMD13-203ENST00000431206 PBRM1Q86U86 1689 aa24.28■■□□□ 1.48
PSMD13-203ENST00000431206 CARMIL1Q5VZK9 1371 aa24.26■■□□□ 1.47
PSMD13-203ENST00000431206 CUL7Q14999 1698 aa24.25■■□□□ 1.47
PSMD13-203ENST00000431206 GRIN2BQ13224 1484 aa24.24■■□□□ 1.47
PSMD13-203ENST00000431206 UBTFP17480 764 aaKnown RBP24.21■■□□□ 1.47
PSMD13-203ENST00000431206 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
PSMD13-203ENST00000431206 ADAMTS12P58397 1594 aa24.14■■□□□ 1.46
PSMD13-203ENST00000431206 SNAPC4Q5SXM2 1469 aa24.13■■□□□ 1.45
PSMD13-203ENST00000431206 FHAD1B1AJZ9 1412 aa24.11■■□□□ 1.45
PSMD13-203ENST00000431206 MAGI1Q96QZ7 1491 aaPredicted RBP24.07■■□□□ 1.44
PSMD13-203ENST00000431206 CEP162Q5TB80 1403 aa24.04■■□□□ 1.44
PSMD13-203ENST00000431206 SYNJ2O15056 1496 aa23.98■■□□□ 1.43
PSMD13-203ENST00000431206 GRIN2AQ12879 1464 aa23.95■■□□□ 1.42
PSMD13-203ENST00000431206 RANGAP1P46060 587 aaPredicted RBP23.95■■□□□ 1.42
PSMD13-203ENST00000431206 CTTNBP2Q8WZ74 1663 aa23.94■■□□□ 1.42
PSMD13-203ENST00000431206 CHMP7Q8WUX9 453 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms