RNA–Protein interactions for RNA: ENST00000259939.3

RNF144B-201, Transcript of ring finger protein 144B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF144B, Length 5,036 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144B-201ENST00000259939 NISCHQ9Y2I1 1504 aa21■□□□□ 0.95
RNF144B-201ENST00000259939 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
RNF144B-201ENST00000259939 SUPT5HO00267 1087 aaKnown RBP19.95■□□□□ 0.78
RNF144B-201ENST00000259939 SHROOM4Q9ULL8 1493 aa19.63■□□□□ 0.73
RNF144B-201ENST00000259939 APLP2Q06481 763 aa19.08■□□□□ 0.64
RNF144B-201ENST00000259939 PELP1Q8IZL8 1130 aaKnown RBP18.89■□□□□ 0.61
RNF144B-201ENST00000259939 EHMT2Q96KQ7 1210 aa18.88■□□□□ 0.61
RNF144B-201ENST00000259939 FAM9AQ8IZU1 332 aaPredicted RBP18.88■□□□□ 0.61
RNF144B-201ENST00000259939 TRIM41Q8WV44 630 aa18.69■□□□□ 0.58
RNF144B-201ENST00000259939 ZEB1P37275 1124 aaPredicted RBP18.65■□□□□ 0.58
RNF144B-201ENST00000259939 PCGF6Q9BYE7 350 aa18.55■□□□□ 0.56
RNF144B-201ENST00000259939 UBTFP17480 764 aaKnown RBP18.36■□□□□ 0.53
RNF144B-201ENST00000259939 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
RNF144B-201ENST00000259939 CCER1Q8TC90 406 aaPredicted RBP18.31■□□□□ 0.52
RNF144B-201ENST00000259939 TTBK1Q5TCY1 1321 aaPredicted RBP18.29■□□□□ 0.52
RNF144B-201ENST00000259939 RANGAP1P46060 587 aaPredicted RBP18.2■□□□□ 0.5
RNF144B-201ENST00000259939 ATP1B4Q9UN42 357 aaPredicted RBP18.16■□□□□ 0.5
RNF144B-201ENST00000259939 TRIM26Q12899 539 aaPredicted RBP18.09■□□□□ 0.49
RNF144B-201ENST00000259939 CHIC1Q5VXU3 224 aa17.99■□□□□ 0.47
RNF144B-201ENST00000259939 NEFLP07196 543 aa17.87■□□□□ 0.45
RNF144B-201ENST00000259939 ERICH6Q7L0X2 663 aa17.84■□□□□ 0.45
RNF144B-201ENST00000259939 HRCP23327 699 aa17.79■□□□□ 0.44
RNF144B-201ENST00000259939 ABCC9O60706 1549 aa17.73■□□□□ 0.43
RNF144B-201ENST00000259939 LOC105371045A0A1W2PR82 267 aa17.7■□□□□ 0.42
RNF144B-201ENST00000259939 PPARGC1BQ86YN6 1023 aaKnown RBP17.7■□□□□ 0.42
RNF144B-201ENST00000259939 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.62■□□□□ 0.41
RNF144B-201ENST00000259939 HNRNPUL2Q1KMD3 747 aaKnown RBP17.62■□□□□ 0.41
RNF144B-201ENST00000259939 MYT1Q01538 1121 aa17.59■□□□□ 0.41
RNF144B-201ENST00000259939 YTHDC1Q96MU7 727 aaKnown RBP17.58■□□□□ 0.41
RNF144B-201ENST00000259939 ITGAEP38570 1179 aa17.56■□□□□ 0.4
RNF144B-201ENST00000259939 PABPN1Q86U42 306 aaKnown RBP eCLIP17.48■□□□□ 0.39
RNF144B-201ENST00000259939 MYT1LQ9UL68 1186 aa17.47■□□□□ 0.39
RNF144B-201ENST00000259939 ZCCHC6Q5VYS8 1495 aaKnown RBP17.43■□□□□ 0.38
RNF144B-201ENST00000259939 CCDC180Q9P1Z9 1646 aa17.41■□□□□ 0.38
RNF144B-201ENST00000259939 FAM50AQ14320 339 aaKnown RBP17.3■□□□□ 0.36
RNF144B-201ENST00000259939 POLR3GLQ9BT43 218 aa17.3■□□□□ 0.36
RNF144B-201ENST00000259939 DIEXFQ68CQ4 756 aaKnown RBP17.27■□□□□ 0.35
RNF144B-201ENST00000259939 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
RNF144B-201ENST00000259939 DAXXQ9UER7 740 aaPredicted RBP17.23■□□□□ 0.35
RNF144B-201ENST00000259939 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
RNF144B-201ENST00000259939 TRIM52Q96A61 297 aa17.18■□□□□ 0.34
RNF144B-201ENST00000259939 DCAF1Q9Y4B6 1507 aa17.04■□□□□ 0.32
RNF144B-201ENST00000259939 NEUROD1Q13562 356 aa17.03■□□□□ 0.32
RNF144B-201ENST00000259939 ANP32CO43423 234 aa17.03■□□□□ 0.32
RNF144B-201ENST00000259939 CDK11AQ9UQ88 783 aaPredicted RBP17.03■□□□□ 0.32
RNF144B-201ENST00000259939 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
RNF144B-201ENST00000259939 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
RNF144B-201ENST00000259939 RB1CC1Q8TDY2 1594 aa16.97■□□□□ 0.31
RNF144B-201ENST00000259939 FBLN2P98095 1184 aa16.96■□□□□ 0.31
RNF144B-201ENST00000259939 CNGB1Q14028 1251 aaPredicted RBP16.94■□□□□ 0.3
RNF144B-201ENST00000259939 NACADO15069 1562 aa16.89■□□□□ 0.29
RNF144B-201ENST00000259939 EEA1Q15075 1411 aa16.87■□□□□ 0.29
RNF144B-201ENST00000259939 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
RNF144B-201ENST00000259939 P3H3Q8IVL6 736 aa16.85■□□□□ 0.29
RNF144B-201ENST00000259939 ZNF326Q5BKZ1 582 aaKnown RBP16.83■□□□□ 0.28
RNF144B-201ENST00000259939 RTL5Q5HYW3 569 aaPredicted RBP16.83■□□□□ 0.28
RNF144B-201ENST00000259939 RSF1Q96T23 1441 aaPredicted RBP16.75■□□□□ 0.27
RNF144B-201ENST00000259939 TONSLQ96HA7 1378 aa16.74■□□□□ 0.27
RNF144B-201ENST00000259939 GTF3C3Q9Y5Q9 886 aa16.73■□□□□ 0.27
RNF144B-201ENST00000259939 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
RNF144B-201ENST00000259939 NEFMP07197 916 aa16.71■□□□□ 0.27
RNF144B-201ENST00000259939 ZNF777Q9ULD5 760 aaPredicted RBP16.71■□□□□ 0.27
RNF144B-201ENST00000259939 ZBTB47Q9UFB7 747 aaPredicted RBP16.69■□□□□ 0.26
RNF144B-201ENST00000259939 CLIP1P30622 1438 aa16.67■□□□□ 0.26
RNF144B-201ENST00000259939 GOLGA3Q08378 1498 aa16.66■□□□□ 0.26
RNF144B-201ENST00000259939 ARID3CA6NKF2 412 aa16.64■□□□□ 0.26
RNF144B-201ENST00000259939 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
RNF144B-201ENST00000259939 MTUS2Q5JR59 1369 aa16.61■□□□□ 0.25
RNF144B-201ENST00000259939 BAZ1BQ9UIG0 1483 aaKnown RBP16.6■□□□□ 0.25
RNF144B-201ENST00000259939 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.25
RNF144B-201ENST00000259939 BAZ1AQ9NRL2 1556 aaPredicted RBP16.59■□□□□ 0.25
RNF144B-201ENST00000259939 CANXP27824 592 aaKnown RBP16.59■□□□□ 0.25
RNF144B-201ENST00000259939 BCANQ96GW7 911 aa16.57■□□□□ 0.24
RNF144B-201ENST00000259939 TSPY4P0CV99 314 aa16.55■□□□□ 0.24
RNF144B-201ENST00000259939 TSPY10P0CW01 314 aa16.55■□□□□ 0.24
RNF144B-201ENST00000259939 ESF1Q9H501 851 aaKnown RBP16.54■□□□□ 0.24
RNF144B-201ENST00000259939 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
RNF144B-201ENST00000259939 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
RNF144B-201ENST00000259939 TNIKQ9UKE5 1360 aa16.53■□□□□ 0.24
RNF144B-201ENST00000259939 CEP162Q5TB80 1403 aa16.52■□□□□ 0.24
RNF144B-201ENST00000259939 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
RNF144B-201ENST00000259939 ANP32AP39687 249 aaKnown RBP16.45■□□□□ 0.22
RNF144B-201ENST00000259939 STAG3Q9UJ98 1225 aa16.43■□□□□ 0.22
RNF144B-201ENST00000259939 DDX10Q13206 875 aaKnown RBP16.41■□□□□ 0.22
RNF144B-201ENST00000259939 CHIC2Q9UKJ5 165 aa16.41■□□□□ 0.22
RNF144B-201ENST00000259939 HNRNPUQ00839 825 aaKnown RBP eCLIP16.39■□□□□ 0.21
RNF144B-201ENST00000259939 CHGAP10645 457 aaKnown RBP16.39■□□□□ 0.21
RNF144B-201ENST00000259939 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
RNF144B-201ENST00000259939 PLEKHD1A6NEE1 506 aa16.37■□□□□ 0.21
RNF144B-201ENST00000259939 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.36■□□□□ 0.21
RNF144B-201ENST00000259939 TMC1Q8TDI8 760 aa16.36■□□□□ 0.21
RNF144B-201ENST00000259939 EIF4G2P78344 907 aaKnown RBP eCLIP16.35■□□□□ 0.21
RNF144B-201ENST00000259939 FKBP8Q14318 412 aa16.33■□□□□ 0.2
RNF144B-201ENST00000259939 SLC24A1O60721 1099 aa16.32■□□□□ 0.2
RNF144B-201ENST00000259939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.32■□□□□ 0.2
RNF144B-201ENST00000259939 FHAD1B1AJZ9 1412 aa16.32■□□□□ 0.2
RNF144B-201ENST00000259939 FAM9BQ8IZU0 186 aa16.3■□□□□ 0.2
RNF144B-201ENST00000259939 WDR43Q15061 677 aaKnown RBP eCLIP16.28■□□□□ 0.2
RNF144B-201ENST00000259939 UPF2Q9HAU5 1272 aaKnown RBP16.28■□□□□ 0.2
RNF144B-201ENST00000259939 CECR2Q9BXF3 1484 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms