Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 AC012618.1-201ENST00000461223 412 ntBASIC11.88□□□□□ -0.51
SRRM5B3KS81 RN7SL258P-201ENST00000478664 300 ntBASIC11.88□□□□□ -0.51
SRRM5B3KS81 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 ALG1L13P-202ENST00000519320 584 ntBASIC11.88□□□□□ -0.51
SRRM5B3KS81 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 NAT9-211ENST00000580632 799 ntTSL 3 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 AL353726.2-201ENST00000623259 884 ntBASIC11.88□□□□□ -0.51
SRRM5B3KS81 AC079336.7-201ENST00000623428 1078 ntBASIC11.88□□□□□ -0.51
SRRM5B3KS81 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM5B3KS81 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM5B3KS81 AC130686.1-201ENST00000622936 2466 ntBASIC11.88□□□□□ -0.51
SRRM5B3KS81 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM5B3KS81 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM5B3KS81 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM5B3KS81 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM5B3KS81 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM5B3KS81 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM5B3KS81 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM5B3KS81 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM5B3KS81 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM5B3KS81 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SRRM5B3KS81 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.88□□□□□ -0.51
SRRM5B3KS81 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 AC015909.5-201ENST00000624336 2266 ntBASIC11.87□□□□□ -0.51
SRRM5B3KS81 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 AC073869.2-201ENST00000417338 1026 ntBASIC11.87□□□□□ -0.51
SRRM5B3KS81 HINT2P1-201ENST00000419438 481 ntBASIC11.87□□□□□ -0.51
SRRM5B3KS81 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 NAGK-204ENST00000443872 878 ntTSL 3 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 RPSAP15-201ENST00000448168 861 ntBASIC11.87□□□□□ -0.51
SRRM5B3KS81 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 AC114947.1-202ENST00000514136 344 ntBASIC11.87□□□□□ -0.51
SRRM5B3KS81 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 STUB1-204ENST00000564370 875 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 NDUFB10P1-201ENST00000567319 521 ntBASIC11.87□□□□□ -0.51
SRRM5B3KS81 RN7SL574P-201ENST00000581512 297 ntBASIC11.87□□□□□ -0.51
SRRM5B3KS81 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 TP53-221ENST00000615910 1149 ntTSL 5 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
SRRM5B3KS81 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
SRRM5B3KS81 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms