RNA–Protein interactions for RNA: ENST00000406452.7

RMDN1-201, Transcript of regulator of microtubule dynamics 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RMDN1, Length 3,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-201ENST00000406452 NISCHQ9Y2I1 1504 aa29.67■■■□□ 2.34
RMDN1-201ENST00000406452 SHROOM4Q9ULL8 1493 aa25.57■■□□□ 1.68
RMDN1-201ENST00000406452 DCAF8L2P0C7V8 631 aa25.27■■□□□ 1.64
RMDN1-201ENST00000406452 CCDC180Q9P1Z9 1646 aa25.13■■□□□ 1.61
RMDN1-201ENST00000406452 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
RMDN1-201ENST00000406452 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
RMDN1-201ENST00000406452 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
RMDN1-201ENST00000406452 CHIC1Q5VXU3 224 aa24.04■■□□□ 1.44
RMDN1-201ENST00000406452 ABCC9O60706 1549 aa23.86■■□□□ 1.41
RMDN1-201ENST00000406452 SCRIBQ14160 1630 aa23.8■■□□□ 1.4
RMDN1-201ENST00000406452 MYO15BQ96JP2 1530 aa23.76■■□□□ 1.39
RMDN1-201ENST00000406452 RSF1Q96T23 1441 aaPredicted RBP23.48■■□□□ 1.35
RMDN1-201ENST00000406452 LOC105371045A0A1W2PR82 267 aa23.45■■□□□ 1.34
RMDN1-201ENST00000406452 NACADO15069 1562 aa23.41■■□□□ 1.34
RMDN1-201ENST00000406452 CECR2Q9BXF3 1484 aa23.27■■□□□ 1.32
RMDN1-201ENST00000406452 PCGF6Q9BYE7 350 aa23.27■■□□□ 1.31
RMDN1-201ENST00000406452 TRIM41Q8WV44 630 aa23.26■■□□□ 1.31
RMDN1-201ENST00000406452 FAM9AQ8IZU1 332 aaPredicted RBP23.22■■□□□ 1.31
RMDN1-201ENST00000406452 RB1CC1Q8TDY2 1594 aa23.16■■□□□ 1.3
RMDN1-201ENST00000406452 EHMT2Q96KQ7 1210 aa23.16■■□□□ 1.3
RMDN1-201ENST00000406452 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
RMDN1-201ENST00000406452 WIZO95785 1651 aa22.95■■□□□ 1.27
RMDN1-201ENST00000406452 HRCP23327 699 aa22.95■■□□□ 1.26
RMDN1-201ENST00000406452 PABPN1Q86U42 306 aaKnown RBP eCLIP22.93■■□□□ 1.26
RMDN1-201ENST00000406452 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
RMDN1-201ENST00000406452 TRIM26Q12899 539 aaPredicted RBP22.73■■□□□ 1.23
RMDN1-201ENST00000406452 PPARGC1BQ86YN6 1023 aaKnown RBP22.66■■□□□ 1.22
RMDN1-201ENST00000406452 SMARCA4P51532 1647 aa22.6■■□□□ 1.21
RMDN1-201ENST00000406452 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
RMDN1-201ENST00000406452 CCDC88BA6NC98 1476 aa22.55■■□□□ 1.2
RMDN1-201ENST00000406452 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
RMDN1-201ENST00000406452 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
RMDN1-201ENST00000406452 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
RMDN1-201ENST00000406452 SMARCA2P51531 1590 aa22.41■■□□□ 1.18
RMDN1-201ENST00000406452 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.17
RMDN1-201ENST00000406452 TTBK1Q5TCY1 1321 aaPredicted RBP22.33■■□□□ 1.16
RMDN1-201ENST00000406452 UBTFP17480 764 aaKnown RBP22.27■■□□□ 1.16
RMDN1-201ENST00000406452 SOGA1O94964 1423 aa22.26■■□□□ 1.15
RMDN1-201ENST00000406452 CSRNP3Q8WYN3 585 aa22.2■■□□□ 1.14
RMDN1-201ENST00000406452 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
RMDN1-201ENST00000406452 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
RMDN1-201ENST00000406452 RUSC2Q8N2Y8 1516 aa22.14■■□□□ 1.13
RMDN1-201ENST00000406452 WRNQ14191 1432 aaPredicted RBP eCLIP22.13■■□□□ 1.13
RMDN1-201ENST00000406452 ZEB1P37275 1124 aaPredicted RBP22.12■■□□□ 1.13
RMDN1-201ENST00000406452 CEP162Q5TB80 1403 aa22.05■■□□□ 1.12
RMDN1-201ENST00000406452 PEG3Q9GZU2 1588 aa22.04■■□□□ 1.12
RMDN1-201ENST00000406452 RANGAP1P46060 587 aaPredicted RBP22.04■■□□□ 1.12
RMDN1-201ENST00000406452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22■■□□□ 1.11
RMDN1-201ENST00000406452 EEA1Q15075 1411 aa21.99■■□□□ 1.11
RMDN1-201ENST00000406452 TNIKQ9UKE5 1360 aa21.98■■□□□ 1.11
RMDN1-201ENST00000406452 CCER1Q8TC90 406 aaPredicted RBP21.95■■□□□ 1.11
RMDN1-201ENST00000406452 SYNJ1O43426 1573 aa21.9■■□□□ 1.1
RMDN1-201ENST00000406452 GOLGA3Q08378 1498 aa21.9■■□□□ 1.1
RMDN1-201ENST00000406452 CEP164Q9UPV0 1460 aa21.78■■□□□ 1.08
RMDN1-201ENST00000406452 APLP2Q06481 763 aa21.76■■□□□ 1.07
RMDN1-201ENST00000406452 CLIP1P30622 1438 aa21.72■■□□□ 1.07
RMDN1-201ENST00000406452 NCAPD3P42695 1498 aa21.71■■□□□ 1.07
RMDN1-201ENST00000406452 RAPGEF2Q9Y4G8 1499 aa21.69■■□□□ 1.06
RMDN1-201ENST00000406452 HNRNPUL2Q1KMD3 747 aaKnown RBP21.67■■□□□ 1.06
RMDN1-201ENST00000406452 HMGXB3Q12766 1538 aa21.61■■□□□ 1.05
RMDN1-201ENST00000406452 KIF21BO75037 1637 aa21.6■■□□□ 1.05
RMDN1-201ENST00000406452 TOP2BQ02880 1626 aa21.6■■□□□ 1.05
RMDN1-201ENST00000406452 VPS8Q8N3P4 1428 aa21.52■■□□□ 1.04
RMDN1-201ENST00000406452 CUX1P39880 1505 aa21.51■■□□□ 1.03
RMDN1-201ENST00000406452 CFTRP13569 1480 aa21.5■■□□□ 1.03
RMDN1-201ENST00000406452 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
RMDN1-201ENST00000406452 BIVM-ERCC5R4GMW8 1640 aa21.45■■□□□ 1.02
RMDN1-201ENST00000406452 CADPSQ9ULU8 1353 aa21.4■■□□□ 1.02
RMDN1-201ENST00000406452 PRXQ9BXM0 1461 aa21.39■■□□□ 1.02
RMDN1-201ENST00000406452 CUX2O14529 1486 aa21.35■■□□□ 1.01
RMDN1-201ENST00000406452 DIEXFQ68CQ4 756 aaKnown RBP21.32■■□□□ 1
RMDN1-201ENST00000406452 KANK4Q5T7N3 995 aaPredicted RBP21.32■■□□□ 1
RMDN1-201ENST00000406452 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
RMDN1-201ENST00000406452 CC2D2AQ9P2K1 1620 aa21.3■■□□□ 1
RMDN1-201ENST00000406452 ATP1B4Q9UN42 357 aaPredicted RBP21.26■□□□□ 0.99
RMDN1-201ENST00000406452 ARAP1Q96P48 1450 aa21.26■□□□□ 0.99
RMDN1-201ENST00000406452 ITGAEP38570 1179 aa21.26■□□□□ 0.99
RMDN1-201ENST00000406452 IGF1RP08069 1367 aa21.24■□□□□ 0.99
RMDN1-201ENST00000406452 P3H3Q8IVL6 736 aa21.24■□□□□ 0.99
RMDN1-201ENST00000406452 FGD5Q6ZNL6 1462 aa21.23■□□□□ 0.99
RMDN1-201ENST00000406452 CARMIL1Q5VZK9 1371 aa21.21■□□□□ 0.99
RMDN1-201ENST00000406452 FANCD2Q9BXW9 1451 aa21.19■□□□□ 0.98
RMDN1-201ENST00000406452 ZNF316A6NFI3 1004 aaPredicted RBP21.18■□□□□ 0.98
RMDN1-201ENST00000406452 NESP48681 1621 aa21.14■□□□□ 0.98
RMDN1-201ENST00000406452 ARHGAP35Q9NRY4 1499 aa21.14■□□□□ 0.98
RMDN1-201ENST00000406452 RAD54L2Q9Y4B4 1467 aa21.1■□□□□ 0.97
RMDN1-201ENST00000406452 PRDM2Q13029 1718 aa21.06■□□□□ 0.96
RMDN1-201ENST00000406452 DNAJC5BQ9UF47 199 aa21.06■□□□□ 0.96
RMDN1-201ENST00000406452 SCAF1Q9H7N4 1312 aaKnown RBP21.03■□□□□ 0.96
RMDN1-201ENST00000406452 FAM50AQ14320 339 aaKnown RBP20.99■□□□□ 0.95
RMDN1-201ENST00000406452 CCNB3Q8WWL7 1395 aa20.99■□□□□ 0.95
RMDN1-201ENST00000406452 YTHDC1Q96MU7 727 aaKnown RBP20.98■□□□□ 0.95
RMDN1-201ENST00000406452 TOPBP1Q92547 1522 aa20.98■□□□□ 0.95
RMDN1-201ENST00000406452 POLA1P09884 1462 aaPredicted RBP20.97■□□□□ 0.95
RMDN1-201ENST00000406452 NEUROD1Q13562 356 aa20.96■□□□□ 0.95
RMDN1-201ENST00000406452 CENPBP07199 599 aaPredicted RBP20.95■□□□□ 0.94
RMDN1-201ENST00000406452 TDRD9Q8NDG6 1382 aaKnown RBP20.95■□□□□ 0.94
RMDN1-201ENST00000406452 DNMBPQ6XZF7 1577 aa20.94■□□□□ 0.94
RMDN1-201ENST00000406452 DHX57Q6P158 1386 aaKnown RBP20.93■□□□□ 0.94
RMDN1-201ENST00000406452 ACIN1Q9UKV3 1341 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms