RNA–Protein interactions for RNA: ENST00000361953.7

FOXM1-203, Transcript of forkhead box M1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FOXM1, Length 3,370 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-203ENST00000361953 NISCHQ9Y2I1 1504 aa29.63■■■□□ 2.33
FOXM1-203ENST00000361953 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
FOXM1-203ENST00000361953 DCAF8L2P0C7V8 631 aa25.64■■□□□ 1.7
FOXM1-203ENST00000361953 SUPT5HO00267 1087 aaKnown RBP25.35■■□□□ 1.65
FOXM1-203ENST00000361953 ZCCHC6Q5VYS8 1495 aaKnown RBP24.94■■□□□ 1.58
FOXM1-203ENST00000361953 CCDC180Q9P1Z9 1646 aa24.91■■□□□ 1.58
FOXM1-203ENST00000361953 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
FOXM1-203ENST00000361953 ABCC9O60706 1549 aa24.04■■□□□ 1.44
FOXM1-203ENST00000361953 MYO15BQ96JP2 1530 aa23.96■■□□□ 1.43
FOXM1-203ENST00000361953 DCAF1Q9Y4B6 1507 aa23.95■■□□□ 1.42
FOXM1-203ENST00000361953 SCRIBQ14160 1630 aa23.9■■□□□ 1.42
FOXM1-203ENST00000361953 LOC105371045A0A1W2PR82 267 aa23.77■■□□□ 1.4
FOXM1-203ENST00000361953 EHMT2Q96KQ7 1210 aa23.66■■□□□ 1.38
FOXM1-203ENST00000361953 FAM9AQ8IZU1 332 aaPredicted RBP23.56■■□□□ 1.36
FOXM1-203ENST00000361953 PCGF6Q9BYE7 350 aa23.53■■□□□ 1.36
FOXM1-203ENST00000361953 RSF1Q96T23 1441 aaPredicted RBP23.53■■□□□ 1.36
FOXM1-203ENST00000361953 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
FOXM1-203ENST00000361953 CECR2Q9BXF3 1484 aa23.4■■□□□ 1.34
FOXM1-203ENST00000361953 NACADO15069 1562 aa23.27■■□□□ 1.32
FOXM1-203ENST00000361953 RB1CC1Q8TDY2 1594 aa23.25■■□□□ 1.31
FOXM1-203ENST00000361953 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
FOXM1-203ENST00000361953 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
FOXM1-203ENST00000361953 HRCP23327 699 aa23.04■■□□□ 1.28
FOXM1-203ENST00000361953 WIZO95785 1651 aa23.03■■□□□ 1.28
FOXM1-203ENST00000361953 PPARGC1BQ86YN6 1023 aaKnown RBP23.01■■□□□ 1.27
FOXM1-203ENST00000361953 TRIM26Q12899 539 aaPredicted RBP22.79■■□□□ 1.24
FOXM1-203ENST00000361953 TTBK1Q5TCY1 1321 aaPredicted RBP22.77■■□□□ 1.24
FOXM1-203ENST00000361953 BAZ1AQ9NRL2 1556 aaPredicted RBP22.73■■□□□ 1.23
FOXM1-203ENST00000361953 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
FOXM1-203ENST00000361953 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
FOXM1-203ENST00000361953 UNC13AQ9UPW8 1703 aa22.58■■□□□ 1.21
FOXM1-203ENST00000361953 SMARCA4P51532 1647 aa22.56■■□□□ 1.2
FOXM1-203ENST00000361953 TOP2AP11388 1531 aaKnown RBP22.47■■□□□ 1.19
FOXM1-203ENST00000361953 UBTFP17480 764 aaKnown RBP22.45■■□□□ 1.18
FOXM1-203ENST00000361953 RANGAP1P46060 587 aaPredicted RBP22.45■■□□□ 1.18
FOXM1-203ENST00000361953 BICRAQ9NZM4 1560 aa22.42■■□□□ 1.18
FOXM1-203ENST00000361953 SOGA1O94964 1423 aa22.4■■□□□ 1.18
FOXM1-203ENST00000361953 SMARCA2P51531 1590 aa22.4■■□□□ 1.18
FOXM1-203ENST00000361953 RUSC2Q8N2Y8 1516 aa22.31■■□□□ 1.16
FOXM1-203ENST00000361953 CSRNP3Q8WYN3 585 aa22.28■■□□□ 1.16
FOXM1-203ENST00000361953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.27■■□□□ 1.16
FOXM1-203ENST00000361953 EIF4G1Q04637 1599 aaKnown RBP22.26■■□□□ 1.15
FOXM1-203ENST00000361953 BAZ1BQ9UIG0 1483 aaKnown RBP22.16■■□□□ 1.14
FOXM1-203ENST00000361953 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
FOXM1-203ENST00000361953 WRNQ14191 1432 aaPredicted RBP eCLIP22.15■■□□□ 1.14
FOXM1-203ENST00000361953 CCER1Q8TC90 406 aaPredicted RBP22.12■■□□□ 1.13
FOXM1-203ENST00000361953 CEP162Q5TB80 1403 aa22.11■■□□□ 1.13
FOXM1-203ENST00000361953 ZEB1P37275 1124 aaPredicted RBP22.03■■□□□ 1.12
FOXM1-203ENST00000361953 TNIKQ9UKE5 1360 aa21.95■■□□□ 1.1
FOXM1-203ENST00000361953 SYNJ1O43426 1573 aa21.95■■□□□ 1.1
FOXM1-203ENST00000361953 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
FOXM1-203ENST00000361953 PEG3Q9GZU2 1588 aa21.89■■□□□ 1.1
FOXM1-203ENST00000361953 GOLGA3Q08378 1498 aa21.87■■□□□ 1.09
FOXM1-203ENST00000361953 EEA1Q15075 1411 aa21.84■■□□□ 1.09
FOXM1-203ENST00000361953 APLP2Q06481 763 aa21.83■■□□□ 1.08
FOXM1-203ENST00000361953 RAPGEF2Q9Y4G8 1499 aa21.79■■□□□ 1.08
FOXM1-203ENST00000361953 CLIP1P30622 1438 aa21.77■■□□□ 1.08
FOXM1-203ENST00000361953 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
FOXM1-203ENST00000361953 NCAPD3P42695 1498 aa21.65■■□□□ 1.06
FOXM1-203ENST00000361953 ITGAEP38570 1179 aa21.56■■□□□ 1.04
FOXM1-203ENST00000361953 ATP1B4Q9UN42 357 aaPredicted RBP21.54■■□□□ 1.04
FOXM1-203ENST00000361953 CUX1P39880 1505 aa21.54■■□□□ 1.04
FOXM1-203ENST00000361953 TOP2BQ02880 1626 aa21.54■■□□□ 1.04
FOXM1-203ENST00000361953 P3H3Q8IVL6 736 aa21.52■■□□□ 1.04
FOXM1-203ENST00000361953 KANK4Q5T7N3 995 aaPredicted RBP21.51■■□□□ 1.03
FOXM1-203ENST00000361953 VPS8Q8N3P4 1428 aa21.51■■□□□ 1.03
FOXM1-203ENST00000361953 KIF21BO75037 1637 aa21.5■■□□□ 1.03
FOXM1-203ENST00000361953 HMGXB3Q12766 1538 aa21.48■■□□□ 1.03
FOXM1-203ENST00000361953 CFTRP13569 1480 aa21.47■■□□□ 1.03
FOXM1-203ENST00000361953 KIF27Q86VH2 1401 aa21.47■■□□□ 1.03
FOXM1-203ENST00000361953 DIEXFQ68CQ4 756 aaKnown RBP21.45■■□□□ 1.02
FOXM1-203ENST00000361953 DNAJC5BQ9UF47 199 aa21.44■■□□□ 1.02
FOXM1-203ENST00000361953 CUX2O14529 1486 aa21.42■■□□□ 1.02
FOXM1-203ENST00000361953 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
FOXM1-203ENST00000361953 PRXQ9BXM0 1461 aa21.37■■□□□ 1.01
FOXM1-203ENST00000361953 BIVM-ERCC5R4GMW8 1640 aa21.34■■□□□ 1.01
FOXM1-203ENST00000361953 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
FOXM1-203ENST00000361953 ARAP1Q96P48 1450 aa21.33■■□□□ 1
FOXM1-203ENST00000361953 NESP48681 1621 aa21.31■■□□□ 1
FOXM1-203ENST00000361953 IGF1RP08069 1367 aa21.3■■□□□ 1
FOXM1-203ENST00000361953 YTHDC1Q96MU7 727 aaKnown RBP21.29■■□□□ 1
FOXM1-203ENST00000361953 FGD5Q6ZNL6 1462 aa21.27■■□□□ 1
FOXM1-203ENST00000361953 CARMIL1Q5VZK9 1371 aa21.26■□□□□ 0.99
FOXM1-203ENST00000361953 ZNF316A6NFI3 1004 aaPredicted RBP21.24■□□□□ 0.99
FOXM1-203ENST00000361953 RAD54L2Q9Y4B4 1467 aa21.24■□□□□ 0.99
FOXM1-203ENST00000361953 SCAF1Q9H7N4 1312 aaKnown RBP21.23■□□□□ 0.99
FOXM1-203ENST00000361953 FANCD2Q9BXW9 1451 aa21.22■□□□□ 0.99
FOXM1-203ENST00000361953 ERICH3Q5RHP9 1530 aa21.19■□□□□ 0.98
FOXM1-203ENST00000361953 ARHGAP35Q9NRY4 1499 aa21.18■□□□□ 0.98
FOXM1-203ENST00000361953 FAM50AQ14320 339 aaKnown RBP21.18■□□□□ 0.98
FOXM1-203ENST00000361953 NEUROD1Q13562 356 aa21.16■□□□□ 0.98
FOXM1-203ENST00000361953 TDRD9Q8NDG6 1382 aaKnown RBP21.12■□□□□ 0.97
FOXM1-203ENST00000361953 MIER1Q8N108 512 aa21.07■□□□□ 0.96
FOXM1-203ENST00000361953 ARID3CA6NKF2 412 aa21.06■□□□□ 0.96
FOXM1-203ENST00000361953 CCNB3Q8WWL7 1395 aa21.03■□□□□ 0.96
FOXM1-203ENST00000361953 FHOD3Q2V2M9 1422 aa21.03■□□□□ 0.96
FOXM1-203ENST00000361953 ACIN1Q9UKV3 1341 aaKnown RBP21.02■□□□□ 0.95
FOXM1-203ENST00000361953 POLA1P09884 1462 aaPredicted RBP21.01■□□□□ 0.95
FOXM1-203ENST00000361953 DHX57Q6P158 1386 aaKnown RBP21■□□□□ 0.95
FOXM1-203ENST00000361953 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms