RNA–Protein interactions for RNA: ENST00000427188.1

LINC00313-205, long intergenic non-protein coding RNA 313, humanhuman

TSL 1 (best) BASIC

Gene LINC00313, Length 967 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00313-205ENST00000427188 NISCHQ9Y2I1 1504 aa34.97■■■■□ 3.19
LINC00313-205ENST00000427188 CCDC180Q9P1Z9 1646 aa31.15■■■□□ 2.58
LINC00313-205ENST00000427188 ABCC9O60706 1549 aa30.66■■■□□ 2.5
LINC00313-205ENST00000427188 RB1CC1Q8TDY2 1594 aa29.4■■■□□ 2.3
LINC00313-205ENST00000427188 NACADO15069 1562 aa29.33■■■□□ 2.29
LINC00313-205ENST00000427188 DCAF8L2P0C7V8 631 aa29.26■■■□□ 2.27
LINC00313-205ENST00000427188 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
LINC00313-205ENST00000427188 MYO15BQ96JP2 1530 aa29.1■■■□□ 2.25
LINC00313-205ENST00000427188 DCAF1Q9Y4B6 1507 aa28.93■■■□□ 2.22
LINC00313-205ENST00000427188 UNC13AQ9UPW8 1703 aa28.72■■■□□ 2.19
LINC00313-205ENST00000427188 PABPN1Q86U42 306 aaKnown RBP eCLIP28.61■■■□□ 2.17
LINC00313-205ENST00000427188 BICRAQ9NZM4 1560 aa28.53■■■□□ 2.16
LINC00313-205ENST00000427188 SCRIBQ14160 1630 aa28.44■■■□□ 2.14
LINC00313-205ENST00000427188 DNAJC5BQ9UF47 199 aa28.26■■■□□ 2.11
LINC00313-205ENST00000427188 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
LINC00313-205ENST00000427188 EIF4G1Q04637 1599 aaKnown RBP27.8■■■□□ 2.04
LINC00313-205ENST00000427188 CC2D2AQ9P2K1 1620 aa27.71■■■□□ 2.03
LINC00313-205ENST00000427188 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
LINC00313-205ENST00000427188 SMARCA4P51532 1647 aa27.18■■□□□ 1.94
LINC00313-205ENST00000427188 BAZ1AQ9NRL2 1556 aaPredicted RBP27.12■■□□□ 1.93
LINC00313-205ENST00000427188 ATAD2BQ9ULI0 1458 aa27.07■■□□□ 1.92
LINC00313-205ENST00000427188 NCAPD3P42695 1498 aa27.06■■□□□ 1.92
LINC00313-205ENST00000427188 SMARCA2P51531 1590 aa27.02■■□□□ 1.92
LINC00313-205ENST00000427188 MROH2BQ7Z745 1585 aa26.96■■□□□ 1.91
LINC00313-205ENST00000427188 HMGXB3Q12766 1538 aa26.93■■□□□ 1.9
LINC00313-205ENST00000427188 PEG3Q9GZU2 1588 aa26.91■■□□□ 1.9
LINC00313-205ENST00000427188 BAZ1BQ9UIG0 1483 aaKnown RBP26.84■■□□□ 1.89
LINC00313-205ENST00000427188 WIZO95785 1651 aa26.65■■□□□ 1.86
LINC00313-205ENST00000427188 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
LINC00313-205ENST00000427188 NESP48681 1621 aa26.48■■□□□ 1.83
LINC00313-205ENST00000427188 ERCC6Q03468 1493 aa26.43■■□□□ 1.82
LINC00313-205ENST00000427188 LAMC3Q9Y6N6 1575 aa26.38■■□□□ 1.81
LINC00313-205ENST00000427188 TOP2AP11388 1531 aaKnown RBP26.37■■□□□ 1.81
LINC00313-205ENST00000427188 CADPSQ9ULU8 1353 aa26.27■■□□□ 1.8
LINC00313-205ENST00000427188 CUX2O14529 1486 aa26.21■■□□□ 1.79
LINC00313-205ENST00000427188 PDS5BQ9NTI5 1447 aa26.21■■□□□ 1.79
LINC00313-205ENST00000427188 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
LINC00313-205ENST00000427188 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
LINC00313-205ENST00000427188 CFTRP13569 1480 aa26.09■■□□□ 1.77
LINC00313-205ENST00000427188 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
LINC00313-205ENST00000427188 FANCD2Q9BXW9 1451 aa25.98■■□□□ 1.75
LINC00313-205ENST00000427188 CEP164Q9UPV0 1460 aa25.97■■□□□ 1.75
LINC00313-205ENST00000427188 MRC2Q9UBG0 1479 aa25.96■■□□□ 1.75
LINC00313-205ENST00000427188 WDR62O43379 1518 aa25.88■■□□□ 1.73
LINC00313-205ENST00000427188 PRDM2Q13029 1718 aa25.85■■□□□ 1.73
LINC00313-205ENST00000427188 SUPT5HO00267 1087 aaKnown RBP25.78■■□□□ 1.72
LINC00313-205ENST00000427188 URB2Q14146 1524 aaKnown RBP25.73■■□□□ 1.71
LINC00313-205ENST00000427188 DNAJC5Q9H3Z4 198 aa25.56■■□□□ 1.68
LINC00313-205ENST00000427188 TOPBP1Q92547 1522 aa25.55■■□□□ 1.68
LINC00313-205ENST00000427188 ABCC8Q09428 1581 aa25.51■■□□□ 1.67
LINC00313-205ENST00000427188 DNMBPQ6XZF7 1577 aa25.51■■□□□ 1.67
LINC00313-205ENST00000427188 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
LINC00313-205ENST00000427188 ZNF608Q9ULD9 1512 aaPredicted RBP25.33■■□□□ 1.65
LINC00313-205ENST00000427188 POLA1P09884 1462 aaPredicted RBP25.33■■□□□ 1.65
LINC00313-205ENST00000427188 CUX1P39880 1505 aa25.31■■□□□ 1.64
LINC00313-205ENST00000427188 TARBP1Q13395 1621 aaKnown RBP25.28■■□□□ 1.64
LINC00313-205ENST00000427188 FGD5Q6ZNL6 1462 aa25.24■■□□□ 1.63
LINC00313-205ENST00000427188 EIF4G3O43432 1585 aaKnown RBP25.23■■□□□ 1.63
LINC00313-205ENST00000427188 RAD54L2Q9Y4B4 1467 aa25.21■■□□□ 1.63
LINC00313-205ENST00000427188 SOGA1O94964 1423 aa25.2■■□□□ 1.62
LINC00313-205ENST00000427188 AQRO60306 1485 aaKnown RBP eCLIP25.16■■□□□ 1.62
LINC00313-205ENST00000427188 TDRD9Q8NDG6 1382 aaKnown RBP25.08■■□□□ 1.61
LINC00313-205ENST00000427188 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
LINC00313-205ENST00000427188 WDR97A6NE52 1622 aa25.07■■□□□ 1.6
LINC00313-205ENST00000427188 OSCARQ8IYS5 282 aa25.06■■□□□ 1.6
LINC00313-205ENST00000427188 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
LINC00313-205ENST00000427188 SYNJ1O43426 1573 aa25.03■■□□□ 1.6
LINC00313-205ENST00000427188 BIVM-ERCC5R4GMW8 1640 aa25.03■■□□□ 1.6
LINC00313-205ENST00000427188 ABCA10Q8WWZ4 1543 aa24.98■■□□□ 1.59
LINC00313-205ENST00000427188 GRIN2BQ13224 1484 aa24.94■■□□□ 1.58
LINC00313-205ENST00000427188 SNAPC4Q5SXM2 1469 aa24.94■■□□□ 1.58
LINC00313-205ENST00000427188 CHD1O14646 1710 aa24.92■■□□□ 1.58
LINC00313-205ENST00000427188 GAPVD1Q14C86 1478 aa24.92■■□□□ 1.58
LINC00313-205ENST00000427188 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
LINC00313-205ENST00000427188 MAGI1Q96QZ7 1491 aaPredicted RBP24.89■■□□□ 1.57
LINC00313-205ENST00000427188 FBLN2P98095 1184 aa24.88■■□□□ 1.57
LINC00313-205ENST00000427188 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
LINC00313-205ENST00000427188 SYNJ2O15056 1496 aa24.79■■□□□ 1.56
LINC00313-205ENST00000427188 CHMP7Q8WUX9 453 aaPredicted RBP24.78■■□□□ 1.56
LINC00313-205ENST00000427188 RIMBP3CA6NJZ7 1639 aa24.71■■□□□ 1.55
LINC00313-205ENST00000427188 RIMBP3BA6NNM3 1639 aa24.71■■□□□ 1.55
LINC00313-205ENST00000427188 RIMBP3Q9UFD9 1639 aa24.71■■□□□ 1.55
LINC00313-205ENST00000427188 ARHGEF11O15085 1522 aa24.7■■□□□ 1.54
LINC00313-205ENST00000427188 ADAMTS12P58397 1594 aa24.69■■□□□ 1.54
LINC00313-205ENST00000427188 ERICH3Q5RHP9 1530 aa24.68■■□□□ 1.54
LINC00313-205ENST00000427188 TRIM41Q8WV44 630 aa24.68■■□□□ 1.54
LINC00313-205ENST00000427188 CLASP1Q7Z460 1538 aa24.67■■□□□ 1.54
LINC00313-205ENST00000427188 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
LINC00313-205ENST00000427188 GRIN2AQ12879 1464 aa24.62■■□□□ 1.53
LINC00313-205ENST00000427188 KIF27Q86VH2 1401 aa24.56■■□□□ 1.52
LINC00313-205ENST00000427188 NUP160Q12769 1436 aa24.52■■□□□ 1.52
LINC00313-205ENST00000427188 CEP170Q5SW79 1584 aa24.51■■□□□ 1.51
LINC00313-205ENST00000427188 ARAP1Q96P48 1450 aa24.5■■□□□ 1.51
LINC00313-205ENST00000427188 IGF1RP08069 1367 aa24.47■■□□□ 1.51
LINC00313-205ENST00000427188 CYB5RLQ6IPT4 315 aa24.45■■□□□ 1.5
LINC00313-205ENST00000427188 CUL7Q14999 1698 aa24.43■■□□□ 1.5
LINC00313-205ENST00000427188 SHROOM2Q13796 1616 aa24.34■■□□□ 1.49
LINC00313-205ENST00000427188 RUSC2Q8N2Y8 1516 aa24.33■■□□□ 1.49
LINC00313-205ENST00000427188 CARMIL1Q5VZK9 1371 aa24.32■■□□□ 1.48
LINC00313-205ENST00000427188 ERCC6L2Q5T890 1561 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms