Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AC092171.5-201ENST00000608012 942 ntBASIC14.94□□□□□ -0.02
GRIK1P39086 AC007881.3-201ENST00000608897 607 ntBASIC14.94□□□□□ -0.02
GRIK1P39086 TP53-221ENST00000615910 1149 ntTSL 5 BASIC14.94□□□□□ -0.02
GRIK1P39086 COX6A1P2-201ENST00000620597 330 ntBASIC14.94□□□□□ -0.02
GRIK1P39086 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.94□□□□□ -0.02
GRIK1P39086 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
GRIK1P39086 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.94□□□□□ -0.02
GRIK1P39086 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC14.94□□□□□ -0.02
GRIK1P39086 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
GRIK1P39086 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.94□□□□□ -0.02
GRIK1P39086 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.94□□□□□ -0.02
GRIK1P39086 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
GRIK1P39086 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.94□□□□□ -0.02
GRIK1P39086 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.94□□□□□ -0.02
GRIK1P39086 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
GRIK1P39086 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.94□□□□□ -0.02
GRIK1P39086 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.94□□□□□ -0.02
GRIK1P39086 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GRIK1P39086 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GRIK1P39086 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
GRIK1P39086 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.93□□□□□ -0.02
GRIK1P39086 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.93□□□□□ -0.02
GRIK1P39086 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.93□□□□□ -0.02
GRIK1P39086 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.93□□□□□ -0.02
GRIK1P39086 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.93□□□□□ -0.02
GRIK1P39086 AC098935.1-201ENST00000446057 611 ntBASIC14.93□□□□□ -0.02
GRIK1P39086 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.93□□□□□ -0.02
GRIK1P39086 RN7SL181P-201ENST00000462921 277 ntBASIC14.93□□□□□ -0.02
GRIK1P39086 AC130709.1-201ENST00000484779 1212 ntBASIC14.93□□□□□ -0.02
GRIK1P39086 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.93□□□□□ -0.02
GRIK1P39086 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.93□□□□□ -0.02
GRIK1P39086 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC14.93□□□□□ -0.02
GRIK1P39086 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
GRIK1P39086 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.93□□□□□ -0.02
GRIK1P39086 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC14.93□□□□□ -0.02
GRIK1P39086 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
GRIK1P39086 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.93□□□□□ -0.02
GRIK1P39086 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
GRIK1P39086 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 CICP4-201ENST00000447359 2812 ntBASIC14.93□□□□□ -0.02
GRIK1P39086 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GRIK1P39086 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.93□□□□□ -0.02
GRIK1P39086 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
GRIK1P39086 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 LINC01230-201ENST00000625222 3017 ntBASIC14.92□□□□□ -0.02
GRIK1P39086 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.92□□□□□ -0.02
GRIK1P39086 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 Z69890.1-201ENST00000382990 339 ntBASIC14.92□□□□□ -0.02
GRIK1P39086 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.92□□□□□ -0.02
GRIK1P39086 FXNP2-201ENST00000411625 547 ntBASIC14.92□□□□□ -0.02
GRIK1P39086 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.92□□□□□ -0.02
GRIK1P39086 AL512306.1-201ENST00000432698 848 ntBASIC14.92□□□□□ -0.02
GRIK1P39086 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.92□□□□□ -0.02
GRIK1P39086 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
GRIK1P39086 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms