RNA–Protein interactions for RNA: ENST00000625222.1

LINC01230-201, Transcript of long intergenic non-protein coding RNA 1230, humanhuman

BASIC

Gene LINC01230, Length 3,017 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01230-201ENST00000625222 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
LINC01230-201ENST00000625222 SHROOM4Q9ULL8 1493 aa26.26■■□□□ 1.79
LINC01230-201ENST00000625222 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
LINC01230-201ENST00000625222 DCAF8L2P0C7V8 631 aa25.51■■□□□ 1.67
LINC01230-201ENST00000625222 ZCCHC6Q5VYS8 1495 aaKnown RBP25.11■■□□□ 1.61
LINC01230-201ENST00000625222 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
LINC01230-201ENST00000625222 CCDC180Q9P1Z9 1646 aa24.85■■□□□ 1.57
LINC01230-201ENST00000625222 MYO15BQ96JP2 1530 aa24.83■■□□□ 1.56
LINC01230-201ENST00000625222 PCGF6Q9BYE7 350 aa24.62■■□□□ 1.53
LINC01230-201ENST00000625222 HRCP23327 699 aa24.47■■□□□ 1.51
LINC01230-201ENST00000625222 LOC105371045A0A1W2PR82 267 aa24.44■■□□□ 1.5
LINC01230-201ENST00000625222 PPARGC1BQ86YN6 1023 aaKnown RBP24.3■■□□□ 1.48
LINC01230-201ENST00000625222 EHMT2Q96KQ7 1210 aa24.09■■□□□ 1.45
LINC01230-201ENST00000625222 DCAF1Q9Y4B6 1507 aa24.03■■□□□ 1.44
LINC01230-201ENST00000625222 FAM9AQ8IZU1 332 aaPredicted RBP24.01■■□□□ 1.43
LINC01230-201ENST00000625222 SCRIBQ14160 1630 aa23.89■■□□□ 1.41
LINC01230-201ENST00000625222 TRIM41Q8WV44 630 aa23.85■■□□□ 1.41
LINC01230-201ENST00000625222 TRIM26Q12899 539 aaPredicted RBP23.79■■□□□ 1.4
LINC01230-201ENST00000625222 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
LINC01230-201ENST00000625222 ABCC9O60706 1549 aa23.72■■□□□ 1.39
LINC01230-201ENST00000625222 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
LINC01230-201ENST00000625222 CECR2Q9BXF3 1484 aa23.43■■□□□ 1.34
LINC01230-201ENST00000625222 TTBK1Q5TCY1 1321 aaPredicted RBP23.31■■□□□ 1.32
LINC01230-201ENST00000625222 MROH2BQ7Z745 1585 aa23.27■■□□□ 1.32
LINC01230-201ENST00000625222 ZEB1P37275 1124 aaPredicted RBP23.23■■□□□ 1.31
LINC01230-201ENST00000625222 WIZO95785 1651 aa23.16■■□□□ 1.3
LINC01230-201ENST00000625222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.11■■□□□ 1.29
LINC01230-201ENST00000625222 NACADO15069 1562 aa23.08■■□□□ 1.28
LINC01230-201ENST00000625222 CCER1Q8TC90 406 aaPredicted RBP23.01■■□□□ 1.27
LINC01230-201ENST00000625222 ABCC8Q09428 1581 aa22.87■■□□□ 1.25
LINC01230-201ENST00000625222 SCAF1Q9H7N4 1312 aaKnown RBP22.81■■□□□ 1.24
LINC01230-201ENST00000625222 UBTFP17480 764 aaKnown RBP22.81■■□□□ 1.24
LINC01230-201ENST00000625222 PABPN1Q86U42 306 aaKnown RBP eCLIP22.81■■□□□ 1.24
LINC01230-201ENST00000625222 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
LINC01230-201ENST00000625222 CCDC88BA6NC98 1476 aa22.79■■□□□ 1.24
LINC01230-201ENST00000625222 SOGA1O94964 1423 aa22.72■■□□□ 1.23
LINC01230-201ENST00000625222 RANGAP1P46060 587 aaPredicted RBP22.68■■□□□ 1.22
LINC01230-201ENST00000625222 CEP162Q5TB80 1403 aa22.64■■□□□ 1.21
LINC01230-201ENST00000625222 EIF4G1Q04637 1599 aaKnown RBP22.62■■□□□ 1.21
LINC01230-201ENST00000625222 RUSC2Q8N2Y8 1516 aa22.61■■□□□ 1.21
LINC01230-201ENST00000625222 TOP2AP11388 1531 aaKnown RBP22.61■■□□□ 1.21
LINC01230-201ENST00000625222 CSRNP3Q8WYN3 585 aa22.6■■□□□ 1.21
LINC01230-201ENST00000625222 SMARCA4P51532 1647 aa22.58■■□□□ 1.2
LINC01230-201ENST00000625222 DIEXFQ68CQ4 756 aaKnown RBP22.57■■□□□ 1.2
LINC01230-201ENST00000625222 SMARCA2P51531 1590 aa22.55■■□□□ 1.2
LINC01230-201ENST00000625222 HNRNPUL2Q1KMD3 747 aaKnown RBP22.52■■□□□ 1.2
LINC01230-201ENST00000625222 NEUROD1Q13562 356 aa22.52■■□□□ 1.19
LINC01230-201ENST00000625222 TNIKQ9UKE5 1360 aa22.45■■□□□ 1.18
LINC01230-201ENST00000625222 ACIN1Q9UKV3 1341 aaKnown RBP22.44■■□□□ 1.18
LINC01230-201ENST00000625222 YTHDC1Q96MU7 727 aaKnown RBP22.4■■□□□ 1.18
LINC01230-201ENST00000625222 WRNQ14191 1432 aaPredicted RBP eCLIP22.38■■□□□ 1.17
LINC01230-201ENST00000625222 UNC13AQ9UPW8 1703 aa22.37■■□□□ 1.17
LINC01230-201ENST00000625222 GTF3C3Q9Y5Q9 886 aa22.35■■□□□ 1.17
LINC01230-201ENST00000625222 GOLGA3Q08378 1498 aa22.31■■□□□ 1.16
LINC01230-201ENST00000625222 CENPBP07199 599 aaPredicted RBP22.31■■□□□ 1.16
LINC01230-201ENST00000625222 APLP2Q06481 763 aa22.29■■□□□ 1.16
LINC01230-201ENST00000625222 EEA1Q15075 1411 aa22.26■■□□□ 1.15
LINC01230-201ENST00000625222 ZNF316A6NFI3 1004 aaPredicted RBP22.25■■□□□ 1.15
LINC01230-201ENST00000625222 PELP1Q8IZL8 1130 aaKnown RBP22.25■■□□□ 1.15
LINC01230-201ENST00000625222 CLIP1P30622 1438 aa22.2■■□□□ 1.14
LINC01230-201ENST00000625222 SYNJ1O43426 1573 aa22.16■■□□□ 1.14
LINC01230-201ENST00000625222 BICRAQ9NZM4 1560 aa22.14■■□□□ 1.13
LINC01230-201ENST00000625222 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
LINC01230-201ENST00000625222 MIER1Q8N108 512 aa22.1■■□□□ 1.13
LINC01230-201ENST00000625222 RAPGEF2Q9Y4G8 1499 aa22.09■■□□□ 1.13
LINC01230-201ENST00000625222 BAZ1BQ9UIG0 1483 aaKnown RBP22.07■■□□□ 1.12
LINC01230-201ENST00000625222 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
LINC01230-201ENST00000625222 VPS8Q8N3P4 1428 aa22■■□□□ 1.11
LINC01230-201ENST00000625222 ITGAEP38570 1179 aa21.98■■□□□ 1.11
LINC01230-201ENST00000625222 KIF21BO75037 1637 aa21.93■■□□□ 1.1
LINC01230-201ENST00000625222 KANK4Q5T7N3 995 aaPredicted RBP21.9■■□□□ 1.1
LINC01230-201ENST00000625222 PEG3Q9GZU2 1588 aa21.87■■□□□ 1.09
LINC01230-201ENST00000625222 TOP2BQ02880 1626 aa21.71■■□□□ 1.07
LINC01230-201ENST00000625222 ATP1B4Q9UN42 357 aaPredicted RBP21.71■■□□□ 1.07
LINC01230-201ENST00000625222 DHX57Q6P158 1386 aaKnown RBP21.69■■□□□ 1.06
LINC01230-201ENST00000625222 ARAP1Q96P48 1450 aa21.69■■□□□ 1.06
LINC01230-201ENST00000625222 P3H3Q8IVL6 736 aa21.64■■□□□ 1.05
LINC01230-201ENST00000625222 PRXQ9BXM0 1461 aa21.62■■□□□ 1.05
LINC01230-201ENST00000625222 KIF27Q86VH2 1401 aa21.61■■□□□ 1.05
LINC01230-201ENST00000625222 CUX1P39880 1505 aa21.61■■□□□ 1.05
LINC01230-201ENST00000625222 FAM50AQ14320 339 aaKnown RBP21.55■■□□□ 1.04
LINC01230-201ENST00000625222 BIVM-ERCC5R4GMW8 1640 aa21.54■■□□□ 1.04
LINC01230-201ENST00000625222 CCNB3Q8WWL7 1395 aa21.52■■□□□ 1.04
LINC01230-201ENST00000625222 ERICH3Q5RHP9 1530 aa21.52■■□□□ 1.04
LINC01230-201ENST00000625222 ARHGAP35Q9NRY4 1499 aa21.48■■□□□ 1.03
LINC01230-201ENST00000625222 CUX2O14529 1486 aa21.48■■□□□ 1.03
LINC01230-201ENST00000625222 KCNH8Q96L42 1107 aa21.47■■□□□ 1.03
LINC01230-201ENST00000625222 CLSPNQ9HAW4 1339 aa21.46■■□□□ 1.03
LINC01230-201ENST00000625222 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
LINC01230-201ENST00000625222 HIRIP3Q9BW71 556 aaPredicted RBP21.44■■□□□ 1.02
LINC01230-201ENST00000625222 SIN3AQ96ST3 1273 aa21.43■■□□□ 1.02
LINC01230-201ENST00000625222 RRBP1Q9P2E9 1410 aaKnown RBP21.42■■□□□ 1.02
LINC01230-201ENST00000625222 RAB3GAP2Q9H2M9 1393 aa21.42■■□□□ 1.02
LINC01230-201ENST00000625222 CFTRP13569 1480 aa21.38■■□□□ 1.01
LINC01230-201ENST00000625222 IGF1RP08069 1367 aa21.37■■□□□ 1.01
LINC01230-201ENST00000625222 DDX10Q13206 875 aaKnown RBP21.36■■□□□ 1.01
LINC01230-201ENST00000625222 SUPT16HQ9Y5B9 1047 aaKnown RBP21.36■■□□□ 1.01
LINC01230-201ENST00000625222 CARMIL1Q5VZK9 1371 aa21.36■■□□□ 1.01
LINC01230-201ENST00000625222 BCANQ96GW7 911 aa21.35■■□□□ 1.01
LINC01230-201ENST00000625222 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms