Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 AC067942.2-201ENST00000506227 1268 ntBASIC13.53□□□□□ -0.24
RIF1Q5UIP0 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 AL078624.1-201ENST00000604004 547 ntBASIC13.53□□□□□ -0.24
RIF1Q5UIP0 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RIF1Q5UIP0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 OR10K2-201ENST00000314902 939 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 RNF7-202ENST00000393000 805 ntTSL 2 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 TCEA3-204ENST00000461794 713 ntTSL 3 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 RN7SL22P-201ENST00000471800 269 ntBASIC13.52□□□□□ -0.24
RIF1Q5UIP0 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 AC008622.3-201ENST00000621170 600 ntBASIC13.52□□□□□ -0.24
RIF1Q5UIP0 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RIF1Q5UIP0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 MIR766-201ENST00000390223 111 ntBASIC13.52□□□□□ -0.25
RIF1Q5UIP0 EEF1GP1-201ENST00000457231 1299 ntBASIC13.52□□□□□ -0.25
RIF1Q5UIP0 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 CCND3P2-201ENST00000579393 537 ntBASIC13.52□□□□□ -0.25
RIF1Q5UIP0 AC009812.1-201ENST00000605948 1059 ntBASIC13.52□□□□□ -0.25
RIF1Q5UIP0 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC13.52□□□□□ -0.25
RIF1Q5UIP0 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RIF1Q5UIP0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 SERF2-205ENST00000403425 690 ntTSL 2 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RIF1Q5UIP0 AC112693.3-201ENST00000624819 1983 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms