RNA–Protein interactions for RNA: ENST00000528497.1

AP003062.1-201, humanhuman

TSL 3 BASIC

Gene AP003062.1, Length 762 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003062.1-201ENST00000528497 NISCHQ9Y2I1 1504 aa30.09■■■□□ 2.41
AP003062.1-201ENST00000528497 ABCC9O60706 1549 aa27.31■■□□□ 1.96
AP003062.1-201ENST00000528497 CCDC180Q9P1Z9 1646 aa27.19■■□□□ 1.94
AP003062.1-201ENST00000528497 RB1CC1Q8TDY2 1594 aa25.93■■□□□ 1.74
AP003062.1-201ENST00000528497 DNAJC5BQ9UF47 199 aa25.75■■□□□ 1.71
AP003062.1-201ENST00000528497 NACADO15069 1562 aa25.69■■□□□ 1.7
AP003062.1-201ENST00000528497 DCAF8L2P0C7V8 631 aa25.53■■□□□ 1.68
AP003062.1-201ENST00000528497 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.68
AP003062.1-201ENST00000528497 PABPN1Q86U42 306 aaKnown RBP eCLIP25.36■■□□□ 1.65
AP003062.1-201ENST00000528497 MYO15BQ96JP2 1530 aa25.22■■□□□ 1.63
AP003062.1-201ENST00000528497 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
AP003062.1-201ENST00000528497 ZCCHC6Q5VYS8 1495 aaKnown RBP24.87■■□□□ 1.57
AP003062.1-201ENST00000528497 DCAF1Q9Y4B6 1507 aa24.82■■□□□ 1.56
AP003062.1-201ENST00000528497 SHROOM4Q9ULL8 1493 aa24.75■■□□□ 1.55
AP003062.1-201ENST00000528497 SCRIBQ14160 1630 aa24.73■■□□□ 1.55
AP003062.1-201ENST00000528497 CC2D2AQ9P2K1 1620 aa24.7■■□□□ 1.54
AP003062.1-201ENST00000528497 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
AP003062.1-201ENST00000528497 EIF4G1Q04637 1599 aaKnown RBP24.56■■□□□ 1.52
AP003062.1-201ENST00000528497 DNAJC5Q9H3Z4 198 aa23.81■■□□□ 1.4
AP003062.1-201ENST00000528497 NCAPD3P42695 1498 aa23.66■■□□□ 1.38
AP003062.1-201ENST00000528497 CUX2O14529 1486 aa23.6■■□□□ 1.37
AP003062.1-201ENST00000528497 ERCC6Q03468 1493 aa23.59■■□□□ 1.37
AP003062.1-201ENST00000528497 ATAD2BQ9ULI0 1458 aa23.57■■□□□ 1.36
AP003062.1-201ENST00000528497 SMARCA4P51532 1647 aa23.56■■□□□ 1.36
AP003062.1-201ENST00000528497 SMARCA2P51531 1590 aa23.53■■□□□ 1.36
AP003062.1-201ENST00000528497 HMGXB3Q12766 1538 aa23.5■■□□□ 1.35
AP003062.1-201ENST00000528497 NESP48681 1621 aa23.4■■□□□ 1.34
AP003062.1-201ENST00000528497 BAZ1AQ9NRL2 1556 aaPredicted RBP23.39■■□□□ 1.33
AP003062.1-201ENST00000528497 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
AP003062.1-201ENST00000528497 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
AP003062.1-201ENST00000528497 THOC2Q8NI27 1593 aaKnown RBP23.23■■□□□ 1.31
AP003062.1-201ENST00000528497 LAMC3Q9Y6N6 1575 aa23.23■■□□□ 1.31
AP003062.1-201ENST00000528497 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
AP003062.1-201ENST00000528497 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
AP003062.1-201ENST00000528497 PDS5BQ9NTI5 1447 aa23.06■■□□□ 1.28
AP003062.1-201ENST00000528497 WIZO95785 1651 aa22.98■■□□□ 1.27
AP003062.1-201ENST00000528497 CADPSQ9ULU8 1353 aa22.94■■□□□ 1.26
AP003062.1-201ENST00000528497 MRC2Q9UBG0 1479 aa22.87■■□□□ 1.25
AP003062.1-201ENST00000528497 WDR62O43379 1518 aa22.83■■□□□ 1.25
AP003062.1-201ENST00000528497 CEP164Q9UPV0 1460 aa22.75■■□□□ 1.23
AP003062.1-201ENST00000528497 TRIM41Q8WV44 630 aa22.72■■□□□ 1.23
AP003062.1-201ENST00000528497 FANCD2Q9BXW9 1451 aa22.69■■□□□ 1.22
AP003062.1-201ENST00000528497 PRDM2Q13029 1718 aa22.63■■□□□ 1.21
AP003062.1-201ENST00000528497 CFTRP13569 1480 aa22.63■■□□□ 1.21
AP003062.1-201ENST00000528497 TOP2AP11388 1531 aaKnown RBP22.6■■□□□ 1.21
AP003062.1-201ENST00000528497 RSF1Q96T23 1441 aaPredicted RBP22.59■■□□□ 1.21
AP003062.1-201ENST00000528497 URB2Q14146 1524 aaKnown RBP22.52■■□□□ 1.2
AP003062.1-201ENST00000528497 OSCARQ8IYS5 282 aa22.5■■□□□ 1.19
AP003062.1-201ENST00000528497 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
AP003062.1-201ENST00000528497 IFT140Q96RY7 1462 aa22.29■■□□□ 1.16
AP003062.1-201ENST00000528497 RIMBP3CA6NJZ7 1639 aa22.29■■□□□ 1.16
AP003062.1-201ENST00000528497 RIMBP3BA6NNM3 1639 aa22.29■■□□□ 1.16
AP003062.1-201ENST00000528497 RIMBP3Q9UFD9 1639 aa22.29■■□□□ 1.16
AP003062.1-201ENST00000528497 ZNF608Q9ULD9 1512 aaPredicted RBP22.28■■□□□ 1.16
AP003062.1-201ENST00000528497 TOPBP1Q92547 1522 aa22.26■■□□□ 1.15
AP003062.1-201ENST00000528497 ABCC8Q09428 1581 aa22.21■■□□□ 1.15
AP003062.1-201ENST00000528497 EIF4G3O43432 1585 aaKnown RBP22.2■■□□□ 1.14
AP003062.1-201ENST00000528497 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
AP003062.1-201ENST00000528497 CHD1O14646 1710 aa22.17■■□□□ 1.14
AP003062.1-201ENST00000528497 ARHGEF11O15085 1522 aa22.14■■□□□ 1.13
AP003062.1-201ENST00000528497 TARBP1Q13395 1621 aaKnown RBP22.11■■□□□ 1.13
AP003062.1-201ENST00000528497 AQRO60306 1485 aaKnown RBP eCLIP22.05■■□□□ 1.12
AP003062.1-201ENST00000528497 POLA1P09884 1462 aaPredicted RBP22■■□□□ 1.11
AP003062.1-201ENST00000528497 CYB5RLQ6IPT4 315 aa21.99■■□□□ 1.11
AP003062.1-201ENST00000528497 FBLN2P98095 1184 aa21.98■■□□□ 1.11
AP003062.1-201ENST00000528497 RAD54L2Q9Y4B4 1467 aa21.94■■□□□ 1.1
AP003062.1-201ENST00000528497 SOGA1O94964 1423 aa21.9■■□□□ 1.1
AP003062.1-201ENST00000528497 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
AP003062.1-201ENST00000528497 TDRD9Q8NDG6 1382 aaKnown RBP21.87■■□□□ 1.09
AP003062.1-201ENST00000528497 WDR97A6NE52 1622 aa21.87■■□□□ 1.09
AP003062.1-201ENST00000528497 FGD5Q6ZNL6 1462 aa21.85■■□□□ 1.09
AP003062.1-201ENST00000528497 TRHP20396 242 aaPredicted RBP21.84■■□□□ 1.09
AP003062.1-201ENST00000528497 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
AP003062.1-201ENST00000528497 CUX1P39880 1505 aa21.8■■□□□ 1.08
AP003062.1-201ENST00000528497 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
AP003062.1-201ENST00000528497 CLASP1Q7Z460 1538 aa21.78■■□□□ 1.08
AP003062.1-201ENST00000528497 PBRM1Q86U86 1689 aa21.78■■□□□ 1.08
AP003062.1-201ENST00000528497 CHMP7Q8WUX9 453 aaPredicted RBP21.77■■□□□ 1.08
AP003062.1-201ENST00000528497 MAGI1Q96QZ7 1491 aaPredicted RBP21.76■■□□□ 1.07
AP003062.1-201ENST00000528497 GRIN2BQ13224 1484 aa21.73■■□□□ 1.07
AP003062.1-201ENST00000528497 SYNJ2O15056 1496 aa21.69■■□□□ 1.06
AP003062.1-201ENST00000528497 GAPVD1Q14C86 1478 aa21.64■■□□□ 1.06
AP003062.1-201ENST00000528497 ABCA5Q8WWZ7 1642 aa21.61■■□□□ 1.05
AP003062.1-201ENST00000528497 ABCA10Q8WWZ4 1543 aa21.58■■□□□ 1.04
AP003062.1-201ENST00000528497 SUPT5HO00267 1087 aaKnown RBP21.5■■□□□ 1.03
AP003062.1-201ENST00000528497 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
AP003062.1-201ENST00000528497 GRIN2AQ12879 1464 aa21.45■■□□□ 1.03
AP003062.1-201ENST00000528497 ADAMTS12P58397 1594 aa21.45■■□□□ 1.02
AP003062.1-201ENST00000528497 ERCC6L2Q5T890 1561 aa21.44■■□□□ 1.02
AP003062.1-201ENST00000528497 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.02
AP003062.1-201ENST00000528497 TOP2BQ02880 1626 aa21.43■■□□□ 1.02
AP003062.1-201ENST00000528497 CEP170Q5SW79 1584 aa21.42■■□□□ 1.02
AP003062.1-201ENST00000528497 SHROOM2Q13796 1616 aa21.37■■□□□ 1.01
AP003062.1-201ENST00000528497 NUP160Q12769 1436 aa21.37■■□□□ 1.01
AP003062.1-201ENST00000528497 AEBP2Q6ZN18 517 aaPredicted RBP21.36■■□□□ 1.01
AP003062.1-201ENST00000528497 FHAD1B1AJZ9 1412 aa21.34■■□□□ 1.01
AP003062.1-201ENST00000528497 ERICH3Q5RHP9 1530 aa21.32■■□□□ 1
AP003062.1-201ENST00000528497 KIF13AQ9H1H9 1805 aa21.32■■□□□ 1
AP003062.1-201ENST00000528497 PRG4Q92954 1404 aaPredicted RBP21.2■□□□□ 0.98
AP003062.1-201ENST00000528497 JPH4Q96JJ6 628 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms