RNA–Protein interactions for RNA: ENST00000461794.1

TCEA3-204, Transcript of transcription elongation factor A3, humanhuman

TSL 3 BASIC

Gene TCEA3, Length 713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-204ENST00000461794 NISCHQ9Y2I1 1504 aa31.26■■■□□ 2.59
TCEA3-204ENST00000461794 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
TCEA3-204ENST00000461794 ABCC9O60706 1549 aa27.78■■■□□ 2.04
TCEA3-204ENST00000461794 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
TCEA3-204ENST00000461794 NACADO15069 1562 aa26.37■■□□□ 1.81
TCEA3-204ENST00000461794 DCAF8L2P0C7V8 631 aa26.18■■□□□ 1.78
TCEA3-204ENST00000461794 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
TCEA3-204ENST00000461794 MYO15BQ96JP2 1530 aa26.06■■□□□ 1.76
TCEA3-204ENST00000461794 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
TCEA3-204ENST00000461794 PABPN1Q86U42 306 aaKnown RBP eCLIP25.84■■□□□ 1.73
TCEA3-204ENST00000461794 DNAJC5BQ9UF47 199 aa25.84■■□□□ 1.73
TCEA3-204ENST00000461794 DCAF1Q9Y4B6 1507 aa25.82■■□□□ 1.72
TCEA3-204ENST00000461794 BICRAQ9NZM4 1560 aa25.81■■□□□ 1.72
TCEA3-204ENST00000461794 SCRIBQ14160 1630 aa25.58■■□□□ 1.69
TCEA3-204ENST00000461794 SHROOM4Q9ULL8 1493 aa25.4■■□□□ 1.66
TCEA3-204ENST00000461794 CC2D2AQ9P2K1 1620 aa25.14■■□□□ 1.61
TCEA3-204ENST00000461794 EIF4G1Q04637 1599 aaKnown RBP25.13■■□□□ 1.61
TCEA3-204ENST00000461794 CECR2Q9BXF3 1484 aa24.98■■□□□ 1.59
TCEA3-204ENST00000461794 SMARCA4P51532 1647 aa24.39■■□□□ 1.5
TCEA3-204ENST00000461794 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
TCEA3-204ENST00000461794 ATAD2BQ9ULI0 1458 aa24.31■■□□□ 1.48
TCEA3-204ENST00000461794 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
TCEA3-204ENST00000461794 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
TCEA3-204ENST00000461794 HMGXB3Q12766 1538 aa24.22■■□□□ 1.47
TCEA3-204ENST00000461794 PEG3Q9GZU2 1588 aa24.13■■□□□ 1.45
TCEA3-204ENST00000461794 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
TCEA3-204ENST00000461794 BAZ1BQ9UIG0 1483 aaKnown RBP24.09■■□□□ 1.45
TCEA3-204ENST00000461794 NESP48681 1621 aa23.95■■□□□ 1.43
TCEA3-204ENST00000461794 ERCC6Q03468 1493 aa23.94■■□□□ 1.42
TCEA3-204ENST00000461794 WIZO95785 1651 aa23.88■■□□□ 1.41
TCEA3-204ENST00000461794 CUX2O14529 1486 aa23.82■■□□□ 1.4
TCEA3-204ENST00000461794 LAMC3Q9Y6N6 1575 aa23.78■■□□□ 1.4
TCEA3-204ENST00000461794 THOC2Q8NI27 1593 aaKnown RBP23.72■■□□□ 1.39
TCEA3-204ENST00000461794 KIF21AQ7Z4S6 1674 aa23.71■■□□□ 1.39
TCEA3-204ENST00000461794 RSF1Q96T23 1441 aaPredicted RBP23.65■■□□□ 1.38
TCEA3-204ENST00000461794 CADPSQ9ULU8 1353 aa23.57■■□□□ 1.36
TCEA3-204ENST00000461794 PDS5BQ9NTI5 1447 aa23.57■■□□□ 1.36
TCEA3-204ENST00000461794 TOP2AP11388 1531 aaKnown RBP23.56■■□□□ 1.36
TCEA3-204ENST00000461794 DNAJC5Q9H3Z4 198 aa23.5■■□□□ 1.35
TCEA3-204ENST00000461794 MRC2Q9UBG0 1479 aa23.42■■□□□ 1.34
TCEA3-204ENST00000461794 WDR62O43379 1518 aa23.39■■□□□ 1.34
TCEA3-204ENST00000461794 CFTRP13569 1480 aa23.38■■□□□ 1.33
TCEA3-204ENST00000461794 CEP164Q9UPV0 1460 aa23.36■■□□□ 1.33
TCEA3-204ENST00000461794 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
TCEA3-204ENST00000461794 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
TCEA3-204ENST00000461794 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
TCEA3-204ENST00000461794 URB2Q14146 1524 aaKnown RBP23.19■■□□□ 1.3
TCEA3-204ENST00000461794 TOPBP1Q92547 1522 aa22.96■■□□□ 1.27
TCEA3-204ENST00000461794 DNMBPQ6XZF7 1577 aa22.9■■□□□ 1.26
TCEA3-204ENST00000461794 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
TCEA3-204ENST00000461794 IFT140Q96RY7 1462 aa22.86■■□□□ 1.25
TCEA3-204ENST00000461794 ABCC8Q09428 1581 aa22.83■■□□□ 1.25
TCEA3-204ENST00000461794 EIF4G3O43432 1585 aaKnown RBP22.8■■□□□ 1.24
TCEA3-204ENST00000461794 TARBP1Q13395 1621 aaKnown RBP22.78■■□□□ 1.24
TCEA3-204ENST00000461794 POLA1P09884 1462 aaPredicted RBP22.74■■□□□ 1.23
TCEA3-204ENST00000461794 SUPT5HO00267 1087 aaKnown RBP22.7■■□□□ 1.22
TCEA3-204ENST00000461794 OSCARQ8IYS5 282 aa22.67■■□□□ 1.22
TCEA3-204ENST00000461794 CUX1P39880 1505 aa22.67■■□□□ 1.22
TCEA3-204ENST00000461794 RAD54L2Q9Y4B4 1467 aa22.65■■□□□ 1.22
TCEA3-204ENST00000461794 AQRO60306 1485 aaKnown RBP eCLIP22.64■■□□□ 1.212e-9■□□□□ 9.3
TCEA3-204ENST00000461794 FGD5Q6ZNL6 1462 aa22.63■■□□□ 1.21
TCEA3-204ENST00000461794 CHD1O14646 1710 aa22.62■■□□□ 1.21
TCEA3-204ENST00000461794 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
TCEA3-204ENST00000461794 SOGA1O94964 1423 aa22.57■■□□□ 1.2
TCEA3-204ENST00000461794 WDR97A6NE52 1622 aa22.55■■□□□ 1.2
TCEA3-204ENST00000461794 RIMBP3CA6NJZ7 1639 aa22.53■■□□□ 1.2
TCEA3-204ENST00000461794 RIMBP3BA6NNM3 1639 aa22.53■■□□□ 1.2
TCEA3-204ENST00000461794 RIMBP3Q9UFD9 1639 aa22.53■■□□□ 1.2
TCEA3-204ENST00000461794 TDRD9Q8NDG6 1382 aaKnown RBP22.52■■□□□ 1.2
TCEA3-204ENST00000461794 SNAPC4Q5SXM2 1469 aa22.46■■□□□ 1.19
TCEA3-204ENST00000461794 ARHGEF11O15085 1522 aa22.45■■□□□ 1.18
TCEA3-204ENST00000461794 PBRM1Q86U86 1689 aa22.42■■□□□ 1.18
TCEA3-204ENST00000461794 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.17
TCEA3-204ENST00000461794 FBLN2P98095 1184 aa22.38■■□□□ 1.17
TCEA3-204ENST00000461794 GRIN2BQ13224 1484 aa22.38■■□□□ 1.17
TCEA3-204ENST00000461794 BIVM-ERCC5R4GMW8 1640 aa22.38■■□□□ 1.17
TCEA3-204ENST00000461794 MAGI1Q96QZ7 1491 aaPredicted RBP22.37■■□□□ 1.17
TCEA3-204ENST00000461794 SYNJ1O43426 1573 aa22.37■■□□□ 1.17
TCEA3-204ENST00000461794 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
TCEA3-204ENST00000461794 TOP2BQ02880 1626 aa22.35■■□□□ 1.17
TCEA3-204ENST00000461794 GAPVD1Q14C86 1478 aa22.33■■□□□ 1.16
TCEA3-204ENST00000461794 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
TCEA3-204ENST00000461794 WRNQ14191 1432 aaPredicted RBP eCLIP22.3■■□□□ 1.16
TCEA3-204ENST00000461794 SYNJ2O15056 1496 aa22.29■■□□□ 1.16
TCEA3-204ENST00000461794 ARAP1Q96P48 1450 aa22.25■■□□□ 1.15
TCEA3-204ENST00000461794 CHMP7Q8WUX9 453 aaPredicted RBP22.23■■□□□ 1.15
TCEA3-204ENST00000461794 ADAMTS12P58397 1594 aa22.2■■□□□ 1.14
TCEA3-204ENST00000461794 CYB5RLQ6IPT4 315 aa22.16■■□□□ 1.14
TCEA3-204ENST00000461794 GRIN2AQ12879 1464 aa22.12■■□□□ 1.13
TCEA3-204ENST00000461794 CEP170Q5SW79 1584 aa22.08■■□□□ 1.13
TCEA3-204ENST00000461794 ERICH3Q5RHP9 1530 aa22.08■■□□□ 1.13
TCEA3-204ENST00000461794 FHAD1B1AJZ9 1412 aa22.04■■□□□ 1.12
TCEA3-204ENST00000461794 NUP160Q12769 1436 aa22.03■■□□□ 1.12
TCEA3-204ENST00000461794 ERCC6L2Q5T890 1561 aa22.01■■□□□ 1.11
TCEA3-204ENST00000461794 SHROOM2Q13796 1616 aa21.97■■□□□ 1.11
TCEA3-204ENST00000461794 RUSC2Q8N2Y8 1516 aa21.9■■□□□ 1.1
TCEA3-204ENST00000461794 CUL7Q14999 1698 aa21.85■■□□□ 1.09
TCEA3-204ENST00000461794 KIF27Q86VH2 1401 aa21.83■■□□□ 1.09
TCEA3-204ENST00000461794 TRHP20396 242 aaPredicted RBP21.83■■□□□ 1.09
TCEA3-204ENST00000461794 IGF1RP08069 1367 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms