RNA–Protein interactions for RNA: ENST00000604004.1

AL078624.1-201, humanhuman

BASIC

Gene AL078624.1, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL078624.1-201ENST00000604004 NISCHQ9Y2I1 1504 aa31.37■■■□□ 2.61
AL078624.1-201ENST00000604004 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
AL078624.1-201ENST00000604004 ABCC9O60706 1549 aa27.91■■■□□ 2.06
AL078624.1-201ENST00000604004 RB1CC1Q8TDY2 1594 aa26.54■■□□□ 1.84
AL078624.1-201ENST00000604004 DCAF8L2P0C7V8 631 aa26.43■■□□□ 1.82
AL078624.1-201ENST00000604004 NACADO15069 1562 aa26.39■■□□□ 1.82
AL078624.1-201ENST00000604004 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.78
AL078624.1-201ENST00000604004 ZCCHC6Q5VYS8 1495 aaKnown RBP26.06■■□□□ 1.76
AL078624.1-201ENST00000604004 MYO15BQ96JP2 1530 aa26.03■■□□□ 1.76
AL078624.1-201ENST00000604004 PABPN1Q86U42 306 aaKnown RBP eCLIP26.02■■□□□ 1.76
AL078624.1-201ENST00000604004 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
AL078624.1-201ENST00000604004 BICRAQ9NZM4 1560 aa25.88■■□□□ 1.73
AL078624.1-201ENST00000604004 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.72
AL078624.1-201ENST00000604004 SCRIBQ14160 1630 aa25.7■■□□□ 1.7
AL078624.1-201ENST00000604004 SHROOM4Q9ULL8 1493 aa25.31■■□□□ 1.64
AL078624.1-201ENST00000604004 CC2D2AQ9P2K1 1620 aa25.2■■□□□ 1.62
AL078624.1-201ENST00000604004 EIF4G1Q04637 1599 aaKnown RBP25.17■■□□□ 1.62
AL078624.1-201ENST00000604004 CECR2Q9BXF3 1484 aa25.04■■□□□ 1.6
AL078624.1-201ENST00000604004 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
AL078624.1-201ENST00000604004 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
AL078624.1-201ENST00000604004 NCAPD3P42695 1498 aa24.36■■□□□ 1.49
AL078624.1-201ENST00000604004 BAZ1AQ9NRL2 1556 aaPredicted RBP24.3■■□□□ 1.48
AL078624.1-201ENST00000604004 SMARCA2P51531 1590 aa24.28■■□□□ 1.48
AL078624.1-201ENST00000604004 MROH2BQ7Z745 1585 aa24.25■■□□□ 1.47
AL078624.1-201ENST00000604004 HMGXB3Q12766 1538 aa24.23■■□□□ 1.47
AL078624.1-201ENST00000604004 BAZ1BQ9UIG0 1483 aaKnown RBP24.16■■□□□ 1.46
AL078624.1-201ENST00000604004 PEG3Q9GZU2 1588 aa24.14■■□□□ 1.45
AL078624.1-201ENST00000604004 NESP48681 1621 aa24.08■■□□□ 1.45
AL078624.1-201ENST00000604004 WIZO95785 1651 aa24.02■■□□□ 1.44
AL078624.1-201ENST00000604004 ERCC6Q03468 1493 aa24■■□□□ 1.43
AL078624.1-201ENST00000604004 CUX2O14529 1486 aa23.8■■□□□ 1.4
AL078624.1-201ENST00000604004 KIF21AQ7Z4S6 1674 aa23.79■■□□□ 1.4
AL078624.1-201ENST00000604004 LAMC3Q9Y6N6 1575 aa23.79■■□□□ 1.4
AL078624.1-201ENST00000604004 RSF1Q96T23 1441 aaPredicted RBP23.77■■□□□ 1.4
AL078624.1-201ENST00000604004 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
AL078624.1-201ENST00000604004 CADPSQ9ULU8 1353 aa23.64■■□□□ 1.37
AL078624.1-201ENST00000604004 TOP2AP11388 1531 aaKnown RBP23.64■■□□□ 1.37
AL078624.1-201ENST00000604004 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
AL078624.1-201ENST00000604004 DNAJC5Q9H3Z4 198 aa23.54■■□□□ 1.36
AL078624.1-201ENST00000604004 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
AL078624.1-201ENST00000604004 CFTRP13569 1480 aa23.43■■□□□ 1.34
AL078624.1-201ENST00000604004 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
AL078624.1-201ENST00000604004 WDR62O43379 1518 aa23.41■■□□□ 1.34
AL078624.1-201ENST00000604004 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
AL078624.1-201ENST00000604004 CCDC88BA6NC98 1476 aa23.38■■□□□ 1.33
AL078624.1-201ENST00000604004 PRDM2Q13029 1718 aa23.33■■□□□ 1.32
AL078624.1-201ENST00000604004 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
AL078624.1-201ENST00000604004 TOPBP1Q92547 1522 aa23.03■■□□□ 1.28
AL078624.1-201ENST00000604004 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
AL078624.1-201ENST00000604004 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
AL078624.1-201ENST00000604004 DNMBPQ6XZF7 1577 aa22.96■■□□□ 1.27
AL078624.1-201ENST00000604004 IFT140Q96RY7 1462 aa22.91■■□□□ 1.26
AL078624.1-201ENST00000604004 EIF4G3O43432 1585 aaKnown RBP22.84■■□□□ 1.25
AL078624.1-201ENST00000604004 ABCC8Q09428 1581 aa22.84■■□□□ 1.25
AL078624.1-201ENST00000604004 TARBP1Q13395 1621 aaKnown RBP22.83■■□□□ 1.25
AL078624.1-201ENST00000604004 POLA1P09884 1462 aaPredicted RBP22.81■■□□□ 1.24
AL078624.1-201ENST00000604004 RAD54L2Q9Y4B4 1467 aa22.79■■□□□ 1.24
AL078624.1-201ENST00000604004 AQRO60306 1485 aaKnown RBP eCLIP22.77■■□□□ 1.24
AL078624.1-201ENST00000604004 CUX1P39880 1505 aa22.77■■□□□ 1.24
AL078624.1-201ENST00000604004 OSCARQ8IYS5 282 aa22.74■■□□□ 1.23
AL078624.1-201ENST00000604004 TRIM41Q8WV44 630 aa22.73■■□□□ 1.23
AL078624.1-201ENST00000604004 FGD5Q6ZNL6 1462 aa22.73■■□□□ 1.23
AL078624.1-201ENST00000604004 CHD1O14646 1710 aa22.69■■□□□ 1.22
AL078624.1-201ENST00000604004 SOGA1O94964 1423 aa22.67■■□□□ 1.22
AL078624.1-201ENST00000604004 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
AL078624.1-201ENST00000604004 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
AL078624.1-201ENST00000604004 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
AL078624.1-201ENST00000604004 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
AL078624.1-201ENST00000604004 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
AL078624.1-201ENST00000604004 FBLN2P98095 1184 aa22.54■■□□□ 1.2
AL078624.1-201ENST00000604004 SNAPC4Q5SXM2 1469 aa22.53■■□□□ 1.2
AL078624.1-201ENST00000604004 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
AL078624.1-201ENST00000604004 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
AL078624.1-201ENST00000604004 ARHGEF11O15085 1522 aa22.48■■□□□ 1.19
AL078624.1-201ENST00000604004 BIVM-ERCC5R4GMW8 1640 aa22.44■■□□□ 1.18
AL078624.1-201ENST00000604004 GRIN2BQ13224 1484 aa22.43■■□□□ 1.18
AL078624.1-201ENST00000604004 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
AL078624.1-201ENST00000604004 ABCA5Q8WWZ7 1642 aa22.42■■□□□ 1.18
AL078624.1-201ENST00000604004 TOP2BQ02880 1626 aa22.42■■□□□ 1.18
AL078624.1-201ENST00000604004 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
AL078624.1-201ENST00000604004 GAPVD1Q14C86 1478 aa22.41■■□□□ 1.18
AL078624.1-201ENST00000604004 WRNQ14191 1432 aaPredicted RBP eCLIP22.4■■□□□ 1.18
AL078624.1-201ENST00000604004 MAGI1Q96QZ7 1491 aaPredicted RBP22.39■■□□□ 1.17
AL078624.1-201ENST00000604004 CHMP7Q8WUX9 453 aaPredicted RBP22.34■■□□□ 1.17
AL078624.1-201ENST00000604004 CLASP1Q7Z460 1538 aa22.34■■□□□ 1.17
AL078624.1-201ENST00000604004 SYNJ2O15056 1496 aa22.33■■□□□ 1.16
AL078624.1-201ENST00000604004 ARAP1Q96P48 1450 aa22.3■■□□□ 1.16
AL078624.1-201ENST00000604004 CYB5RLQ6IPT4 315 aa22.28■■□□□ 1.16
AL078624.1-201ENST00000604004 ADAMTS12P58397 1594 aa22.25■■□□□ 1.15
AL078624.1-201ENST00000604004 GRIN2AQ12879 1464 aa22.17■■□□□ 1.14
AL078624.1-201ENST00000604004 CEP170Q5SW79 1584 aa22.16■■□□□ 1.14
AL078624.1-201ENST00000604004 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
AL078624.1-201ENST00000604004 ERICH3Q5RHP9 1530 aa22.11■■□□□ 1.13
AL078624.1-201ENST00000604004 FHAD1B1AJZ9 1412 aa22.1■■□□□ 1.13
AL078624.1-201ENST00000604004 NUP160Q12769 1436 aa22.07■■□□□ 1.12
AL078624.1-201ENST00000604004 SHROOM2Q13796 1616 aa21.99■■□□□ 1.11
AL078624.1-201ENST00000604004 TRHP20396 242 aaPredicted RBP21.95■■□□□ 1.1
AL078624.1-201ENST00000604004 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
AL078624.1-201ENST00000604004 KIF27Q86VH2 1401 aa21.92■■□□□ 1.1
AL078624.1-201ENST00000604004 IGF1RP08069 1367 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms