RNA–Protein interactions for RNA: ENST00000476151.5

POLR2J2-203, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2J2, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-203ENST00000476151 NISCHQ9Y2I1 1504 aa30.94■■■□□ 2.54
POLR2J2-203ENST00000476151 CCDC180Q9P1Z9 1646 aa27.75■■■□□ 2.03
POLR2J2-203ENST00000476151 ABCC9O60706 1549 aa27.51■■□□□ 1.99
POLR2J2-203ENST00000476151 AEBP2Q6ZN18 517 aaPredicted RBP27.26■■□□□ 1.96
POLR2J2-203ENST00000476151 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
POLR2J2-203ENST00000476151 RB1CC1Q8TDY2 1594 aa26.26■■□□□ 1.79
POLR2J2-203ENST00000476151 NACADO15069 1562 aa26.11■■□□□ 1.77
POLR2J2-203ENST00000476151 DCAF8L2P0C7V8 631 aa25.94■■□□□ 1.74
POLR2J2-203ENST00000476151 UNC13AQ9UPW8 1703 aa25.87■■□□□ 1.73
POLR2J2-203ENST00000476151 MYO15BQ96JP2 1530 aa25.79■■□□□ 1.72
POLR2J2-203ENST00000476151 ZCCHC6Q5VYS8 1495 aaKnown RBP25.71■■□□□ 1.71
POLR2J2-203ENST00000476151 DNAJC5BQ9UF47 199 aa25.61■■□□□ 1.69
POLR2J2-203ENST00000476151 PABPN1Q86U42 306 aaKnown RBP eCLIP25.59■■□□□ 1.69
POLR2J2-203ENST00000476151 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
POLR2J2-203ENST00000476151 DCAF1Q9Y4B6 1507 aa25.55■■□□□ 1.68
POLR2J2-203ENST00000476151 SCRIBQ14160 1630 aa25.31■■□□□ 1.64
POLR2J2-203ENST00000476151 SHROOM4Q9ULL8 1493 aa25.11■■□□□ 1.61
POLR2J2-203ENST00000476151 CC2D2AQ9P2K1 1620 aa24.9■■□□□ 1.58
POLR2J2-203ENST00000476151 EIF4G1Q04637 1599 aaKnown RBP24.88■■□□□ 1.57
POLR2J2-203ENST00000476151 CECR2Q9BXF3 1484 aa24.73■■□□□ 1.55
POLR2J2-203ENST00000476151 SMARCA4P51532 1647 aa24.15■■□□□ 1.46
POLR2J2-203ENST00000476151 NCAPD3P42695 1498 aa24.06■■□□□ 1.44
POLR2J2-203ENST00000476151 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
POLR2J2-203ENST00000476151 SMARCA2P51531 1590 aa24■■□□□ 1.43
POLR2J2-203ENST00000476151 BAZ1AQ9NRL2 1556 aaPredicted RBP24■■□□□ 1.43
POLR2J2-203ENST00000476151 HMGXB3Q12766 1538 aa23.97■■□□□ 1.43
POLR2J2-203ENST00000476151 PEG3Q9GZU2 1588 aa23.89■■□□□ 1.41
POLR2J2-203ENST00000476151 MROH2BQ7Z745 1585 aa23.87■■□□□ 1.41
POLR2J2-203ENST00000476151 PHF23Q9BUL5 403 aaPredicted RBP23.86■■□□□ 1.41
POLR2J2-203ENST00000476151 BAZ1BQ9UIG0 1483 aaKnown RBP23.83■■□□□ 1.41
POLR2J2-203ENST00000476151 NESP48681 1621 aa23.72■■□□□ 1.39
POLR2J2-203ENST00000476151 ERCC6Q03468 1493 aa23.69■■□□□ 1.38
POLR2J2-203ENST00000476151 WIZO95785 1651 aa23.66■■□□□ 1.38
POLR2J2-203ENST00000476151 CUX2O14529 1486 aa23.58■■□□□ 1.37
POLR2J2-203ENST00000476151 LAMC3Q9Y6N6 1575 aa23.55■■□□□ 1.36
POLR2J2-203ENST00000476151 KIF21AQ7Z4S6 1674 aa23.51■■□□□ 1.35
POLR2J2-203ENST00000476151 THOC2Q8NI27 1593 aaKnown RBP23.48■■□□□ 1.35
POLR2J2-203ENST00000476151 RSF1Q96T23 1441 aaPredicted RBP23.4■■□□□ 1.34
POLR2J2-203ENST00000476151 CADPSQ9ULU8 1353 aa23.33■■□□□ 1.33
POLR2J2-203ENST00000476151 PDS5BQ9NTI5 1447 aa23.32■■□□□ 1.32
POLR2J2-203ENST00000476151 TOP2AP11388 1531 aaKnown RBP23.31■■□□□ 1.32
POLR2J2-203ENST00000476151 DNAJC5Q9H3Z4 198 aa23.3■■□□□ 1.32
POLR2J2-203ENST00000476151 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
POLR2J2-203ENST00000476151 WDR62O43379 1518 aa23.15■■□□□ 1.3
POLR2J2-203ENST00000476151 CFTRP13569 1480 aa23.14■■□□□ 1.3
POLR2J2-203ENST00000476151 PRDM2Q13029 1718 aa23.12■■□□□ 1.29
POLR2J2-203ENST00000476151 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
POLR2J2-203ENST00000476151 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
POLR2J2-203ENST00000476151 SENP3Q9H4L4 574 aaPredicted RBP23.08■■□□□ 1.29
POLR2J2-203ENST00000476151 CCDC88BA6NC98 1476 aa23.02■■□□□ 1.27
POLR2J2-203ENST00000476151 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.26
POLR2J2-203ENST00000476151 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
POLR2J2-203ENST00000476151 DNMBPQ6XZF7 1577 aa22.67■■□□□ 1.22
POLR2J2-203ENST00000476151 ZNF608Q9ULD9 1512 aaPredicted RBP22.63■■□□□ 1.21
POLR2J2-203ENST00000476151 IFT140Q96RY7 1462 aa22.62■■□□□ 1.21
POLR2J2-203ENST00000476151 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
POLR2J2-203ENST00000476151 EIF4G3O43432 1585 aaKnown RBP22.57■■□□□ 1.2
POLR2J2-203ENST00000476151 TARBP1Q13395 1621 aaKnown RBP22.55■■□□□ 1.2
POLR2J2-203ENST00000476151 POLA1P09884 1462 aaPredicted RBP22.5■■□□□ 1.19
POLR2J2-203ENST00000476151 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
POLR2J2-203ENST00000476151 OSCARQ8IYS5 282 aa22.46■■□□□ 1.19
POLR2J2-203ENST00000476151 CUX1P39880 1505 aa22.43■■□□□ 1.18
POLR2J2-203ENST00000476151 CHD1O14646 1710 aa22.43■■□□□ 1.18
POLR2J2-203ENST00000476151 AQRO60306 1485 aaKnown RBP eCLIP22.42■■□□□ 1.184e-6■■■■■ 31
POLR2J2-203ENST00000476151 RAD54L2Q9Y4B4 1467 aa22.42■■□□□ 1.18
POLR2J2-203ENST00000476151 FGD5Q6ZNL6 1462 aa22.39■■□□□ 1.18
POLR2J2-203ENST00000476151 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
POLR2J2-203ENST00000476151 SOGA1O94964 1423 aa22.34■■□□□ 1.17
POLR2J2-203ENST00000476151 WDR97A6NE52 1622 aa22.33■■□□□ 1.17
POLR2J2-203ENST00000476151 RIMBP3CA6NJZ7 1639 aa22.33■■□□□ 1.16
POLR2J2-203ENST00000476151 RIMBP3BA6NNM3 1639 aa22.33■■□□□ 1.16
POLR2J2-203ENST00000476151 RIMBP3Q9UFD9 1639 aa22.33■■□□□ 1.16
POLR2J2-203ENST00000476151 TDRD9Q8NDG6 1382 aaKnown RBP22.29■■□□□ 1.16
POLR2J2-203ENST00000476151 ARHGEF11O15085 1522 aa22.23■■□□□ 1.15
POLR2J2-203ENST00000476151 PBRM1Q86U86 1689 aa22.23■■□□□ 1.15
POLR2J2-203ENST00000476151 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
POLR2J2-203ENST00000476151 PLPPR3Q6T4P5 718 aa22.21■■□□□ 1.15
POLR2J2-203ENST00000476151 FBLN2P98095 1184 aa22.16■■□□□ 1.14
POLR2J2-203ENST00000476151 BIVM-ERCC5R4GMW8 1640 aa22.15■■□□□ 1.14
POLR2J2-203ENST00000476151 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
POLR2J2-203ENST00000476151 GRIN2BQ13224 1484 aa22.14■■□□□ 1.13
POLR2J2-203ENST00000476151 SYNJ1O43426 1573 aa22.14■■□□□ 1.13
POLR2J2-203ENST00000476151 MAGI1Q96QZ7 1491 aaPredicted RBP22.13■■□□□ 1.13
POLR2J2-203ENST00000476151 ABCA10Q8WWZ4 1543 aa22.13■■□□□ 1.13
POLR2J2-203ENST00000476151 TOP2BQ02880 1626 aa22.12■■□□□ 1.13
POLR2J2-203ENST00000476151 GAPVD1Q14C86 1478 aa22.1■■□□□ 1.13
POLR2J2-203ENST00000476151 CLASP1Q7Z460 1538 aa22.08■■□□□ 1.12
POLR2J2-203ENST00000476151 SYNJ2O15056 1496 aa22.06■■□□□ 1.12
POLR2J2-203ENST00000476151 WRNQ14191 1432 aaPredicted RBP eCLIP22.06■■□□□ 1.12
POLR2J2-203ENST00000476151 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
POLR2J2-203ENST00000476151 CHMP7Q8WUX9 453 aaPredicted RBP22.01■■□□□ 1.11
POLR2J2-203ENST00000476151 ADAMTS12P58397 1594 aa21.96■■□□□ 1.11
POLR2J2-203ENST00000476151 CYB5RLQ6IPT4 315 aa21.95■■□□□ 1.11
POLR2J2-203ENST00000476151 GRIN2AQ12879 1464 aa21.89■■□□□ 1.09
POLR2J2-203ENST00000476151 CEP170Q5SW79 1584 aa21.86■■□□□ 1.09
POLR2J2-203ENST00000476151 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
POLR2J2-203ENST00000476151 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
POLR2J2-203ENST00000476151 NUP160Q12769 1436 aa21.79■■□□□ 1.08
POLR2J2-203ENST00000476151 ERCC6L2Q5T890 1561 aa21.79■■□□□ 1.08
POLR2J2-203ENST00000476151 SHROOM2Q13796 1616 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 614.4 ms