RNA–Protein interactions for RNA: ENST00000393000.3

RNF7-202, Transcript of ring finger protein 7, humanhuman

TSL 2 BASIC

Gene RNF7, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-202ENST00000393000 NISCHQ9Y2I1 1504 aa30.04■■■□□ 2.4
RNF7-202ENST00000393000 ABCC9O60706 1549 aa27.57■■■□□ 2
RNF7-202ENST00000393000 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
RNF7-202ENST00000393000 DNAJC5BQ9UF47 199 aa26.21■■□□□ 1.79
RNF7-202ENST00000393000 RB1CC1Q8TDY2 1594 aa25.99■■□□□ 1.75
RNF7-202ENST00000393000 NACADO15069 1562 aa25.7■■□□□ 1.71
RNF7-202ENST00000393000 DCAF8L2P0C7V8 631 aa25.62■■□□□ 1.69
RNF7-202ENST00000393000 PABPN1Q86U42 306 aaKnown RBP eCLIP25.62■■□□□ 1.69
RNF7-202ENST00000393000 UNC13AQ9UPW8 1703 aa25.39■■□□□ 1.65
RNF7-202ENST00000393000 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
RNF7-202ENST00000393000 MYO15BQ96JP2 1530 aa25.18■■□□□ 1.62
RNF7-202ENST00000393000 CECR2Q9BXF3 1484 aa24.84■■□□□ 1.57
RNF7-202ENST00000393000 CC2D2AQ9P2K1 1620 aa24.84■■□□□ 1.57
RNF7-202ENST00000393000 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.56
RNF7-202ENST00000393000 ZCCHC6Q5VYS8 1495 aaKnown RBP24.82■■□□□ 1.56
RNF7-202ENST00000393000 SCRIBQ14160 1630 aa24.75■■□□□ 1.55
RNF7-202ENST00000393000 DCAF1Q9Y4B6 1507 aa24.74■■□□□ 1.55
RNF7-202ENST00000393000 EIF4G1Q04637 1599 aaKnown RBP24.69■■□□□ 1.54
RNF7-202ENST00000393000 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
RNF7-202ENST00000393000 CUX2O14529 1486 aa23.84■■□□□ 1.41
RNF7-202ENST00000393000 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
RNF7-202ENST00000393000 NCAPD3P42695 1498 aa23.75■■□□□ 1.39
RNF7-202ENST00000393000 ATAD2BQ9ULI0 1458 aa23.65■■□□□ 1.38
RNF7-202ENST00000393000 NESP48681 1621 aa23.57■■□□□ 1.36
RNF7-202ENST00000393000 HMGXB3Q12766 1538 aa23.54■■□□□ 1.36
RNF7-202ENST00000393000 SMARCA2P51531 1590 aa23.53■■□□□ 1.36
RNF7-202ENST00000393000 SMARCA4P51532 1647 aa23.52■■□□□ 1.36
RNF7-202ENST00000393000 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
RNF7-202ENST00000393000 THOC2Q8NI27 1593 aaKnown RBP23.36■■□□□ 1.33
RNF7-202ENST00000393000 BAZ1AQ9NRL2 1556 aaPredicted RBP23.34■■□□□ 1.33
RNF7-202ENST00000393000 LAMC3Q9Y6N6 1575 aa23.27■■□□□ 1.32
RNF7-202ENST00000393000 PEG3Q9GZU2 1588 aa23.26■■□□□ 1.31
RNF7-202ENST00000393000 KIF21AQ7Z4S6 1674 aa23.21■■□□□ 1.31
RNF7-202ENST00000393000 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
RNF7-202ENST00000393000 PDS5BQ9NTI5 1447 aa23.16■■□□□ 1.3
RNF7-202ENST00000393000 TRIM41Q8WV44 630 aa23.15■■□□□ 1.3
RNF7-202ENST00000393000 CADPSQ9ULU8 1353 aa23.02■■□□□ 1.28
RNF7-202ENST00000393000 MRC2Q9UBG0 1479 aa23■■□□□ 1.27
RNF7-202ENST00000393000 WDR62O43379 1518 aa22.95■■□□□ 1.26
RNF7-202ENST00000393000 WIZO95785 1651 aa22.87■■□□□ 1.25
RNF7-202ENST00000393000 CEP164Q9UPV0 1460 aa22.84■■□□□ 1.25
RNF7-202ENST00000393000 FANCD2Q9BXW9 1451 aa22.79■■□□□ 1.24
RNF7-202ENST00000393000 OSCARQ8IYS5 282 aa22.71■■□□□ 1.23
RNF7-202ENST00000393000 CFTRP13569 1480 aa22.67■■□□□ 1.22
RNF7-202ENST00000393000 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
RNF7-202ENST00000393000 RSF1Q96T23 1441 aaPredicted RBP22.56■■□□□ 1.2
RNF7-202ENST00000393000 TOP2AP11388 1531 aaKnown RBP22.54■■□□□ 1.2
RNF7-202ENST00000393000 RIMBP3CA6NJZ7 1639 aa22.47■■□□□ 1.19
RNF7-202ENST00000393000 RIMBP3BA6NNM3 1639 aa22.47■■□□□ 1.19
RNF7-202ENST00000393000 RIMBP3Q9UFD9 1639 aa22.47■■□□□ 1.19
RNF7-202ENST00000393000 ZNF608Q9ULD9 1512 aaPredicted RBP22.43■■□□□ 1.18
RNF7-202ENST00000393000 IFT140Q96RY7 1462 aa22.38■■□□□ 1.17
RNF7-202ENST00000393000 ARHGEF11O15085 1522 aa22.37■■□□□ 1.17
RNF7-202ENST00000393000 PRDM2Q13029 1718 aa22.36■■□□□ 1.17
RNF7-202ENST00000393000 CCDC88BA6NC98 1476 aa22.31■■□□□ 1.16
RNF7-202ENST00000393000 TOPBP1Q92547 1522 aa22.31■■□□□ 1.16
RNF7-202ENST00000393000 EIF4G3O43432 1585 aaKnown RBP22.27■■□□□ 1.16
RNF7-202ENST00000393000 CYB5RLQ6IPT4 315 aa22.25■■□□□ 1.15
RNF7-202ENST00000393000 AQRO60306 1485 aaKnown RBP eCLIP22.18■■□□□ 1.142e-6■■■■□ 24.2
RNF7-202ENST00000393000 ABCC8Q09428 1581 aa22.17■■□□□ 1.14
RNF7-202ENST00000393000 DNMBPQ6XZF7 1577 aa22.17■■□□□ 1.14
RNF7-202ENST00000393000 CHD1O14646 1710 aa22.16■■□□□ 1.14
RNF7-202ENST00000393000 TRHP20396 242 aaPredicted RBP22.14■■□□□ 1.13
RNF7-202ENST00000393000 FBLN2P98095 1184 aa22.14■■□□□ 1.13
RNF7-202ENST00000393000 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
RNF7-202ENST00000393000 TARBP1Q13395 1621 aaKnown RBP22.13■■□□□ 1.13
RNF7-202ENST00000393000 POLA1P09884 1462 aaPredicted RBP22.06■■□□□ 1.12
RNF7-202ENST00000393000 SUPT5HO00267 1087 aaKnown RBP22.05■■□□□ 1.12
RNF7-202ENST00000393000 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
RNF7-202ENST00000393000 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
RNF7-202ENST00000393000 SOGA1O94964 1423 aa21.95■■□□□ 1.1
RNF7-202ENST00000393000 SNAPC4Q5SXM2 1469 aa21.93■■□□□ 1.1
RNF7-202ENST00000393000 CLASP1Q7Z460 1538 aa21.9■■□□□ 1.1
RNF7-202ENST00000393000 FGD5Q6ZNL6 1462 aa21.88■■□□□ 1.09
RNF7-202ENST00000393000 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
RNF7-202ENST00000393000 SYNJ1O43426 1573 aa21.83■■□□□ 1.09
RNF7-202ENST00000393000 MAGI1Q96QZ7 1491 aaPredicted RBP21.81■■□□□ 1.08
RNF7-202ENST00000393000 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
RNF7-202ENST00000393000 GRIN2BQ13224 1484 aa21.79■■□□□ 1.08
RNF7-202ENST00000393000 CUX1P39880 1505 aa21.79■■□□□ 1.08
RNF7-202ENST00000393000 SYNJ2O15056 1496 aa21.77■■□□□ 1.07
RNF7-202ENST00000393000 AEBP2Q6ZN18 517 aaPredicted RBP21.76■■□□□ 1.07
RNF7-202ENST00000393000 GAPVD1Q14C86 1478 aa21.71■■□□□ 1.07
RNF7-202ENST00000393000 PBRM1Q86U86 1689 aa21.67■■□□□ 1.06
RNF7-202ENST00000393000 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.05
RNF7-202ENST00000393000 ERCC6L2Q5T890 1561 aa21.58■■□□□ 1.05
RNF7-202ENST00000393000 ABCA10Q8WWZ4 1543 aa21.57■■□□□ 1.04
RNF7-202ENST00000393000 GRIN2AQ12879 1464 aa21.52■■□□□ 1.04
RNF7-202ENST00000393000 CEP170Q5SW79 1584 aa21.48■■□□□ 1.03
RNF7-202ENST00000393000 ADAMTS12P58397 1594 aa21.46■■□□□ 1.03
RNF7-202ENST00000393000 NUP160Q12769 1436 aa21.45■■□□□ 1.02
RNF7-202ENST00000393000 WRNQ14191 1432 aaPredicted RBP eCLIP21.42■■□□□ 1.02
RNF7-202ENST00000393000 SHROOM2Q13796 1616 aa21.39■■□□□ 1.01
RNF7-202ENST00000393000 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
RNF7-202ENST00000393000 TOP2BQ02880 1626 aa21.31■■□□□ 1
RNF7-202ENST00000393000 KIF13AQ9H1H9 1805 aa21.31■■□□□ 1
RNF7-202ENST00000393000 PRG4Q92954 1404 aaPredicted RBP21.3■■□□□ 1
RNF7-202ENST00000393000 BIVM-ERCC5R4GMW8 1640 aa21.3■■□□□ 1
RNF7-202ENST00000393000 ERICH3Q5RHP9 1530 aa21.28■■□□□ 1
RNF7-202ENST00000393000 JPH4Q96JJ6 628 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms