RNA–Protein interactions for RNA: ENST00000598409.5

SMIM17-201, Transcript of small integral membrane protein 17, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM17, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17-201ENST00000598409 NISCHQ9Y2I1 1504 aa30.51■■■□□ 2.47
SMIM17-201ENST00000598409 CCDC180Q9P1Z9 1646 aa27.29■■□□□ 1.96
SMIM17-201ENST00000598409 ABCC9O60706 1549 aa27.26■■□□□ 1.95
SMIM17-201ENST00000598409 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
SMIM17-201ENST00000598409 NACADO15069 1562 aa25.89■■□□□ 1.73
SMIM17-201ENST00000598409 DCAF8L2P0C7V8 631 aa25.87■■□□□ 1.73
SMIM17-201ENST00000598409 MYO15BQ96JP2 1530 aa25.59■■□□□ 1.69
SMIM17-201ENST00000598409 DNAJC5BQ9UF47 199 aa25.53■■□□□ 1.68
SMIM17-201ENST00000598409 PABPN1Q86U42 306 aaKnown RBP eCLIP25.46■■□□□ 1.67
SMIM17-201ENST00000598409 ZCCHC6Q5VYS8 1495 aaKnown RBP25.26■■□□□ 1.63
SMIM17-201ENST00000598409 DCAF1Q9Y4B6 1507 aa25.25■■□□□ 1.63
SMIM17-201ENST00000598409 UNC13AQ9UPW8 1703 aa25.2■■□□□ 1.63
SMIM17-201ENST00000598409 BICRAQ9NZM4 1560 aa25.14■■□□□ 1.62
SMIM17-201ENST00000598409 SHROOM4Q9ULL8 1493 aa25■■□□□ 1.59
SMIM17-201ENST00000598409 SCRIBQ14160 1630 aa24.83■■□□□ 1.56
SMIM17-201ENST00000598409 CECR2Q9BXF3 1484 aa24.6■■□□□ 1.53
SMIM17-201ENST00000598409 CC2D2AQ9P2K1 1620 aa24.6■■□□□ 1.53
SMIM17-201ENST00000598409 EIF4G1Q04637 1599 aaKnown RBP24.58■■□□□ 1.52
SMIM17-201ENST00000598409 NCAPD3P42695 1498 aa23.93■■□□□ 1.42
SMIM17-201ENST00000598409 ATAD2BQ9ULI0 1458 aa23.81■■□□□ 1.4
SMIM17-201ENST00000598409 SMARCA2P51531 1590 aa23.78■■□□□ 1.4
SMIM17-201ENST00000598409 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
SMIM17-201ENST00000598409 BAZ1AQ9NRL2 1556 aaPredicted RBP23.7■■□□□ 1.38
SMIM17-201ENST00000598409 HMGXB3Q12766 1538 aa23.68■■□□□ 1.38
SMIM17-201ENST00000598409 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
SMIM17-201ENST00000598409 BAZ1BQ9UIG0 1483 aaKnown RBP23.59■■□□□ 1.37
SMIM17-201ENST00000598409 CUX2O14529 1486 aa23.56■■□□□ 1.36
SMIM17-201ENST00000598409 PEG3Q9GZU2 1588 aa23.53■■□□□ 1.36
SMIM17-201ENST00000598409 DNAJC5Q9H3Z4 198 aa23.53■■□□□ 1.36
SMIM17-201ENST00000598409 MROH2BQ7Z745 1585 aa23.45■■□□□ 1.34
SMIM17-201ENST00000598409 NESP48681 1621 aa23.39■■□□□ 1.33
SMIM17-201ENST00000598409 LAMC3Q9Y6N6 1575 aa23.32■■□□□ 1.32
SMIM17-201ENST00000598409 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
SMIM17-201ENST00000598409 CADPSQ9ULU8 1353 aa23.23■■□□□ 1.31
SMIM17-201ENST00000598409 WIZO95785 1651 aa23.13■■□□□ 1.29
SMIM17-201ENST00000598409 THOC2Q8NI27 1593 aaKnown RBP23.1■■□□□ 1.29
SMIM17-201ENST00000598409 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
SMIM17-201ENST00000598409 RSF1Q96T23 1441 aaPredicted RBP23.07■■□□□ 1.28
SMIM17-201ENST00000598409 KIF21AQ7Z4S6 1674 aa23■■□□□ 1.27
SMIM17-201ENST00000598409 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
SMIM17-201ENST00000598409 CFTRP13569 1480 aa22.92■■□□□ 1.26
SMIM17-201ENST00000598409 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
SMIM17-201ENST00000598409 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
SMIM17-201ENST00000598409 FANCD2Q9BXW9 1451 aa22.89■■□□□ 1.25
SMIM17-201ENST00000598409 WDR62O43379 1518 aa22.88■■□□□ 1.25
SMIM17-201ENST00000598409 CCDC88BA6NC98 1476 aa22.68■■□□□ 1.22
SMIM17-201ENST00000598409 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
SMIM17-201ENST00000598409 OSCARQ8IYS5 282 aa22.61■■□□□ 1.21
SMIM17-201ENST00000598409 ABCC8Q09428 1581 aa22.53■■□□□ 1.2
SMIM17-201ENST00000598409 PRDM2Q13029 1718 aa22.52■■□□□ 1.2
SMIM17-201ENST00000598409 IFT140Q96RY7 1462 aa22.49■■□□□ 1.19
SMIM17-201ENST00000598409 TRIM41Q8WV44 630 aa22.47■■□□□ 1.19
SMIM17-201ENST00000598409 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
SMIM17-201ENST00000598409 DNMBPQ6XZF7 1577 aa22.35■■□□□ 1.17
SMIM17-201ENST00000598409 ZNF608Q9ULD9 1512 aaPredicted RBP22.34■■□□□ 1.17
SMIM17-201ENST00000598409 POLA1P09884 1462 aaPredicted RBP22.22■■□□□ 1.15
SMIM17-201ENST00000598409 SOGA1O94964 1423 aa22.21■■□□□ 1.15
SMIM17-201ENST00000598409 AQRO60306 1485 aaKnown RBP eCLIP22.21■■□□□ 1.15
SMIM17-201ENST00000598409 EIF4G3O43432 1585 aaKnown RBP22.18■■□□□ 1.14
SMIM17-201ENST00000598409 TARBP1Q13395 1621 aaKnown RBP22.17■■□□□ 1.14
SMIM17-201ENST00000598409 SUPT5HO00267 1087 aaKnown RBP22.16■■□□□ 1.14
SMIM17-201ENST00000598409 FBLN2P98095 1184 aa22.16■■□□□ 1.14
SMIM17-201ENST00000598409 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
SMIM17-201ENST00000598409 RAD54L2Q9Y4B4 1467 aa22.11■■□□□ 1.13
SMIM17-201ENST00000598409 FGD5Q6ZNL6 1462 aa22.08■■□□□ 1.12
SMIM17-201ENST00000598409 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
SMIM17-201ENST00000598409 RIMBP3CA6NJZ7 1639 aa22.06■■□□□ 1.12
SMIM17-201ENST00000598409 RIMBP3BA6NNM3 1639 aa22.06■■□□□ 1.12
SMIM17-201ENST00000598409 RIMBP3Q9UFD9 1639 aa22.06■■□□□ 1.12
SMIM17-201ENST00000598409 ARHGEF11O15085 1522 aa22.06■■□□□ 1.12
SMIM17-201ENST00000598409 CHMP7Q8WUX9 453 aaPredicted RBP22.04■■□□□ 1.12
SMIM17-201ENST00000598409 CUX1P39880 1505 aa22.03■■□□□ 1.12
SMIM17-201ENST00000598409 CYB5RLQ6IPT4 315 aa22.02■■□□□ 1.12
SMIM17-201ENST00000598409 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
SMIM17-201ENST00000598409 MAGI1Q96QZ7 1491 aaPredicted RBP21.97■■□□□ 1.11
SMIM17-201ENST00000598409 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
SMIM17-201ENST00000598409 CHD1O14646 1710 aa21.95■■□□□ 1.1
SMIM17-201ENST00000598409 GAPVD1Q14C86 1478 aa21.9■■□□□ 1.1
SMIM17-201ENST00000598409 SYNJ2O15056 1496 aa21.89■■□□□ 1.09
SMIM17-201ENST00000598409 WRNQ14191 1432 aaPredicted RBP eCLIP21.88■■□□□ 1.09
SMIM17-201ENST00000598409 ABCA10Q8WWZ4 1543 aa21.87■■□□□ 1.09
SMIM17-201ENST00000598409 SYNJ1O43426 1573 aa21.86■■□□□ 1.09
SMIM17-201ENST00000598409 ARAP1Q96P48 1450 aa21.82■■□□□ 1.08
SMIM17-201ENST00000598409 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
SMIM17-201ENST00000598409 CLASP1Q7Z460 1538 aa21.79■■□□□ 1.08
SMIM17-201ENST00000598409 TRHP20396 242 aaPredicted RBP21.77■■□□□ 1.08
SMIM17-201ENST00000598409 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
SMIM17-201ENST00000598409 TOP2BQ02880 1626 aa21.73■■□□□ 1.07
SMIM17-201ENST00000598409 PBRM1Q86U86 1689 aa21.72■■□□□ 1.07
SMIM17-201ENST00000598409 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
SMIM17-201ENST00000598409 GRIN2AQ12879 1464 aa21.65■■□□□ 1.06
SMIM17-201ENST00000598409 FHAD1B1AJZ9 1412 aa21.65■■□□□ 1.06
SMIM17-201ENST00000598409 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
SMIM17-201ENST00000598409 NUP160Q12769 1436 aa21.59■■□□□ 1.05
SMIM17-201ENST00000598409 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
SMIM17-201ENST00000598409 JPH4Q96JJ6 628 aa21.49■■□□□ 1.03
SMIM17-201ENST00000598409 CEP170Q5SW79 1584 aa21.48■■□□□ 1.03
SMIM17-201ENST00000598409 KIF27Q86VH2 1401 aa21.43■■□□□ 1.02
SMIM17-201ENST00000598409 SHROOM2Q13796 1616 aa21.4■■□□□ 1.02
SMIM17-201ENST00000598409 PRG4Q92954 1404 aaPredicted RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms