Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.26□□□□□ -0.45
CD40P25942 AC006372.4-201ENST00000624122 1543 ntBASIC12.26□□□□□ -0.45
CD40P25942 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.26□□□□□ -0.45
CD40P25942 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
CD40P25942 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.26□□□□□ -0.45
CD40P25942 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CD40P25942 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.25□□□□□ -0.45
CD40P25942 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
CD40P25942 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.25□□□□□ -0.45
CD40P25942 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.25□□□□□ -0.45
CD40P25942 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.25□□□□□ -0.45
CD40P25942 SSR1P1-201ENST00000407630 814 ntBASIC12.25□□□□□ -0.45
CD40P25942 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.25□□□□□ -0.45
CD40P25942 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.25□□□□□ -0.45
CD40P25942 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.25□□□□□ -0.45
CD40P25942 ERP29P1-201ENST00000442902 706 ntBASIC12.25□□□□□ -0.45
CD40P25942 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.25□□□□□ -0.45
CD40P25942 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC12.25□□□□□ -0.45
CD40P25942 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.25□□□□□ -0.45
CD40P25942 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 AC135983.4-201ENST00000564116 1262 ntBASIC12.25□□□□□ -0.45
CD40P25942 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.25□□□□□ -0.45
CD40P25942 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.25□□□□□ -0.45
CD40P25942 AC084781.1-201ENST00000613737 656 ntBASIC12.25□□□□□ -0.45
CD40P25942 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.25□□□□□ -0.45
CD40P25942 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
CD40P25942 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
CD40P25942 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
CD40P25942 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.25□□□□□ -0.45
CD40P25942 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.25□□□□□ -0.45
CD40P25942 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CD40P25942 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.24□□□□□ -0.45
CD40P25942 AC087386.2-201ENST00000623212 4637 ntBASIC12.24□□□□□ -0.45
CD40P25942 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.24□□□□□ -0.45
CD40P25942 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.24□□□□□ -0.45
CD40P25942 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 Z69890.1-201ENST00000382990 339 ntBASIC12.24□□□□□ -0.45
CD40P25942 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC12.24□□□□□ -0.45
CD40P25942 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.24□□□□□ -0.45
CD40P25942 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.24□□□□□ -0.45
CD40P25942 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CD40P25942 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CD40P25942 AC018638.5-201ENST00000450885 754 ntBASIC12.24□□□□□ -0.45
CD40P25942 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC12.24□□□□□ -0.45
CD40P25942 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC12.24□□□□□ -0.45
CD40P25942 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CD40P25942 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CD40P25942 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms