RNA–Protein interactions for RNA: ENST00000356860.7

CACNA2D1-202, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNA2D1, Length 7,563 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1-202ENST00000356860 DCAF8L2P0C7V8 631 aa23.75■■□□□ 1.39
CACNA2D1-202ENST00000356860 EHMT2Q96KQ7 1210 aa22.32■■□□□ 1.16
CACNA2D1-202ENST00000356860 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
CACNA2D1-202ENST00000356860 SHROOM4Q9ULL8 1493 aa21.78■■□□□ 1.08
CACNA2D1-202ENST00000356860 PELP1Q8IZL8 1130 aaKnown RBP21.73■■□□□ 1.07
CACNA2D1-202ENST00000356860 TTBK1Q5TCY1 1321 aaPredicted RBP21.52■■□□□ 1.04
CACNA2D1-202ENST00000356860 APLP2Q06481 763 aa21.44■■□□□ 1.02
CACNA2D1-202ENST00000356860 FAM9AQ8IZU1 332 aaPredicted RBP21.21■□□□□ 0.99
CACNA2D1-202ENST00000356860 RANGAP1P46060 587 aaPredicted RBP21.21■□□□□ 0.99
CACNA2D1-202ENST00000356860 ERICH6Q7L0X2 663 aa21.18■□□□□ 0.98
CACNA2D1-202ENST00000356860 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
CACNA2D1-202ENST00000356860 PCGF6Q9BYE7 350 aa21.02■□□□□ 0.96
CACNA2D1-202ENST00000356860 CCER1Q8TC90 406 aaPredicted RBP20.81■□□□□ 0.92
CACNA2D1-202ENST00000356860 NISCHQ9Y2I1 1504 aa20.67■□□□□ 0.9
CACNA2D1-202ENST00000356860 CENPBP07199 599 aaPredicted RBP20.66■□□□□ 0.9
CACNA2D1-202ENST00000356860 YTHDC1Q96MU7 727 aaKnown RBP20.64■□□□□ 0.89
CACNA2D1-202ENST00000356860 MYT1Q01538 1121 aa20.53■□□□□ 0.88
CACNA2D1-202ENST00000356860 NEFLP07196 543 aa20.49■□□□□ 0.87
CACNA2D1-202ENST00000356860 UBTFP17480 764 aaKnown RBP20.45■□□□□ 0.86
CACNA2D1-202ENST00000356860 PPARGC1BQ86YN6 1023 aaKnown RBP20.39■□□□□ 0.86
CACNA2D1-202ENST00000356860 TRIM41Q8WV44 630 aa20.38■□□□□ 0.85
CACNA2D1-202ENST00000356860 MYT1LQ9UL68 1186 aa20.36■□□□□ 0.85
CACNA2D1-202ENST00000356860 POLR3GLQ9BT43 218 aa20.33■□□□□ 0.85
CACNA2D1-202ENST00000356860 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
CACNA2D1-202ENST00000356860 CNGB1Q14028 1251 aaPredicted RBP20.29■□□□□ 0.84
CACNA2D1-202ENST00000356860 ZEB1P37275 1124 aaPredicted RBP20.26■□□□□ 0.83
CACNA2D1-202ENST00000356860 DAXXQ9UER7 740 aaPredicted RBP20.21■□□□□ 0.83
CACNA2D1-202ENST00000356860 ITGAEP38570 1179 aa20.14■□□□□ 0.81
CACNA2D1-202ENST00000356860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.11■□□□□ 0.81
CACNA2D1-202ENST00000356860 HNRNPUL2Q1KMD3 747 aaKnown RBP20.11■□□□□ 0.81
CACNA2D1-202ENST00000356860 SLC4A1APQ9BWU0 796 aaKnown RBP20.08■□□□□ 0.81
CACNA2D1-202ENST00000356860 CLSPNQ9HAW4 1339 aa19.76■□□□□ 0.75
CACNA2D1-202ENST00000356860 ZNF316A6NFI3 1004 aaPredicted RBP19.72■□□□□ 0.75
CACNA2D1-202ENST00000356860 BCL11AQ9H165 835 aa19.61■□□□□ 0.73
CACNA2D1-202ENST00000356860 TRIM26Q12899 539 aaPredicted RBP19.59■□□□□ 0.73
CACNA2D1-202ENST00000356860 SLC24A1O60721 1099 aa19.55■□□□□ 0.72
CACNA2D1-202ENST00000356860 RTL5Q5HYW3 569 aaPredicted RBP19.53■□□□□ 0.72
CACNA2D1-202ENST00000356860 HRCP23327 699 aa19.52■□□□□ 0.71
CACNA2D1-202ENST00000356860 LOC105371045A0A1W2PR82 267 aa19.48■□□□□ 0.71
CACNA2D1-202ENST00000356860 FAM50AQ14320 339 aaKnown RBP19.41■□□□□ 0.7
CACNA2D1-202ENST00000356860 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
CACNA2D1-202ENST00000356860 BCANQ96GW7 911 aa19.35■□□□□ 0.69
CACNA2D1-202ENST00000356860 NEUROD1Q13562 356 aa19.35■□□□□ 0.69
CACNA2D1-202ENST00000356860 ZNF326Q5BKZ1 582 aaKnown RBP19.32■□□□□ 0.68
CACNA2D1-202ENST00000356860 ZBTB47Q9UFB7 747 aaPredicted RBP19.3■□□□□ 0.68
CACNA2D1-202ENST00000356860 DIEXFQ68CQ4 756 aaKnown RBP19.24■□□□□ 0.67
CACNA2D1-202ENST00000356860 CANXP27824 592 aaKnown RBP19.16■□□□□ 0.66
CACNA2D1-202ENST00000356860 FBLN2P98095 1184 aa19.12■□□□□ 0.65
CACNA2D1-202ENST00000356860 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
CACNA2D1-202ENST00000356860 CDK11AQ9UQ88 783 aaPredicted RBP19.02■□□□□ 0.64
CACNA2D1-202ENST00000356860 ARID3CA6NKF2 412 aa19.01■□□□□ 0.63
CACNA2D1-202ENST00000356860 ANP32CO43423 234 aa19.01■□□□□ 0.63
CACNA2D1-202ENST00000356860 NEFMP07197 916 aa18.96■□□□□ 0.63
CACNA2D1-202ENST00000356860 NPM2Q86SE8 214 aaKnown RBP18.94■□□□□ 0.62
CACNA2D1-202ENST00000356860 GTF3C3Q9Y5Q9 886 aa18.92■□□□□ 0.62
CACNA2D1-202ENST00000356860 PABPN1Q86U42 306 aaKnown RBP eCLIP18.89■□□□□ 0.61
CACNA2D1-202ENST00000356860 P3H3Q8IVL6 736 aa18.82■□□□□ 0.6
CACNA2D1-202ENST00000356860 ZNF777Q9ULD5 760 aaPredicted RBP18.79■□□□□ 0.6
CACNA2D1-202ENST00000356860 HSP90AA1P07900 732 aaKnown RBP18.76■□□□□ 0.59
CACNA2D1-202ENST00000356860 EIF5BO60841 1220 aaKnown RBP18.75■□□□□ 0.59
CACNA2D1-202ENST00000356860 ANP32AP39687 249 aaKnown RBP18.74■□□□□ 0.59
CACNA2D1-202ENST00000356860 CHGAP10645 457 aaKnown RBP18.73■□□□□ 0.59
CACNA2D1-202ENST00000356860 ESF1Q9H501 851 aaKnown RBP18.71■□□□□ 0.59
CACNA2D1-202ENST00000356860 STAG3Q9UJ98 1225 aa18.7■□□□□ 0.58
CACNA2D1-202ENST00000356860 SALL2Q9Y467 1007 aaPredicted RBP18.69■□□□□ 0.58
CACNA2D1-202ENST00000356860 ARXQ96QS3 562 aa18.68■□□□□ 0.58
CACNA2D1-202ENST00000356860 A0A0G2JS52 829 aa18.67■□□□□ 0.58
CACNA2D1-202ENST00000356860 SCAF1Q9H7N4 1312 aaKnown RBP18.67■□□□□ 0.58
CACNA2D1-202ENST00000356860 ANP32BQ92688 251 aaKnown RBP18.66■□□□□ 0.58
CACNA2D1-202ENST00000356860 PLEKHG5O94827 1062 aa18.64■□□□□ 0.57
CACNA2D1-202ENST00000356860 SENP3Q9H4L4 574 aaPredicted RBP18.59■□□□□ 0.57
CACNA2D1-202ENST00000356860 ABCC9O60706 1549 aa18.57■□□□□ 0.56
CACNA2D1-202ENST00000356860 FAM9BQ8IZU0 186 aa18.51■□□□□ 0.55
CACNA2D1-202ENST00000356860 FKBP8Q14318 412 aa18.5■□□□□ 0.55
CACNA2D1-202ENST00000356860 UPF2Q9HAU5 1272 aaKnown RBP18.5■□□□□ 0.55
CACNA2D1-202ENST00000356860 NBR1Q14596 966 aa18.49■□□□□ 0.55
CACNA2D1-202ENST00000356860 ZBTB7CA1YPR0 619 aa18.49■□□□□ 0.55
CACNA2D1-202ENST00000356860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.45■□□□□ 0.54
CACNA2D1-202ENST00000356860 HNRNPUQ00839 825 aaKnown RBP eCLIP18.41■□□□□ 0.54
CACNA2D1-202ENST00000356860 TULP1O00294 542 aaPredicted RBP18.4■□□□□ 0.54
CACNA2D1-202ENST00000356860 CDK11BP21127 795 aaKnown RBP18.38■□□□□ 0.53
CACNA2D1-202ENST00000356860 C14orf37Q86TY3 774 aa18.34■□□□□ 0.53
CACNA2D1-202ENST00000356860 KDM2AQ9Y2K7 1162 aa18.33■□□□□ 0.52
CACNA2D1-202ENST00000356860 DDX10Q13206 875 aaKnown RBP18.33■□□□□ 0.52
CACNA2D1-202ENST00000356860 TONSLQ96HA7 1378 aa18.32■□□□□ 0.52
CACNA2D1-202ENST00000356860 ACIN1Q9UKV3 1341 aaKnown RBP18.31■□□□□ 0.52
CACNA2D1-202ENST00000356860 TPRNQ4KMQ1 711 aa18.3■□□□□ 0.52
CACNA2D1-202ENST00000356860 CHIC2Q9UKJ5 165 aa18.3■□□□□ 0.52
CACNA2D1-202ENST00000356860 TMC1Q8TDI8 760 aa18.29■□□□□ 0.52
CACNA2D1-202ENST00000356860 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
CACNA2D1-202ENST00000356860 IRX6P78412 446 aaPredicted RBP18.28■□□□□ 0.52
CACNA2D1-202ENST00000356860 WDR43Q15061 677 aaKnown RBP eCLIP18.28■□□□□ 0.52
CACNA2D1-202ENST00000356860 CCDC136Q96JN2 1154 aa18.27■□□□□ 0.52
CACNA2D1-202ENST00000356860 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.26■□□□□ 0.51
CACNA2D1-202ENST00000356860 GLIPR1L2Q4G1C9 344 aa18.21■□□□□ 0.51
CACNA2D1-202ENST00000356860 TAOK2Q9UL54 1235 aa18.21■□□□□ 0.51
CACNA2D1-202ENST00000356860 SENP3-EIF4A1A0A087X0R7 540 aa18.2■□□□□ 0.5
CACNA2D1-202ENST00000356860 MYH16Q9H6N6 1097 aa18.2■□□□□ 0.5
CACNA2D1-202ENST00000356860 HIRIP3Q9BW71 556 aaPredicted RBP18.19■□□□□ 0.5
CACNA2D1-202ENST00000356860 HAP1P54257 671 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms