RNA–Protein interactions for RNA: ENST00000407630.1

SSR1P1-201, Transcript of signal sequence receptor subunit 1 pseudogene 1, humanhuman

BASIC

Gene SSR1P1, Length 814 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P1-201ENST00000407630 CHIC1Q5VXU3 224 aa35.56■■■■□ 3.28
SSR1P1-201ENST00000407630 AEBP2Q6ZN18 517 aaPredicted RBP35.07■■■■□ 3.2
SSR1P1-201ENST00000407630 PHF23Q9BUL5 403 aaPredicted RBP31.46■■■□□ 2.63
SSR1P1-201ENST00000407630 SENP3Q9H4L4 574 aaPredicted RBP29.49■■■□□ 2.31
SSR1P1-201ENST00000407630 PLPPR3Q6T4P5 718 aa29.47■■■□□ 2.31
SSR1P1-201ENST00000407630 ADRA2BP18089 450 aa27.63■■■□□ 2.01
SSR1P1-201ENST00000407630 PPP6R1Q9UPN7 881 aa27.31■■□□□ 1.96
SSR1P1-201ENST00000407630 FOXD1Q16676 465 aa27.24■■□□□ 1.95
SSR1P1-201ENST00000407630 KCNA4P22459 653 aa27.16■■□□□ 1.94
SSR1P1-201ENST00000407630 EHMT2Q96KQ7 1210 aa26.97■■□□□ 1.91
SSR1P1-201ENST00000407630 PPP4R3CPQ6ZMV5 832 aa26.17■■□□□ 1.78
SSR1P1-201ENST00000407630 SLC4A1APQ9BWU0 796 aaKnown RBP26.09■■□□□ 1.77
SSR1P1-201ENST00000407630 PIAS4Q8N2W9 510 aaPredicted RBP26.01■■□□□ 1.75
SSR1P1-201ENST00000407630 CSRNP3Q8WYN3 585 aa26■■□□□ 1.75
SSR1P1-201ENST00000407630 NCBP3Q53F19 620 aaKnown RBP25.85■■□□□ 1.73
SSR1P1-201ENST00000407630 NPM3O75607 178 aaKnown RBP25.51■■□□□ 1.67
SSR1P1-201ENST00000407630 CNKSR2Q8WXI2 1034 aa25.1■■□□□ 1.61
SSR1P1-201ENST00000407630 ZBTB22O15209 634 aa25.04■■□□□ 1.6
SSR1P1-201ENST00000407630 SCAF1Q9H7N4 1312 aaKnown RBP24.95■■□□□ 1.58
SSR1P1-201ENST00000407630 FOXD4L1Q9NU39 408 aa24.57■■□□□ 1.52
SSR1P1-201ENST00000407630 MSH5O43196 834 aa24.52■■□□□ 1.52
SSR1P1-201ENST00000407630 DNAJC5BQ9UF47 199 aa24.52■■□□□ 1.52
SSR1P1-201ENST00000407630 MAPK8IP2Q13387 824 aaPredicted RBP24.42■■□□□ 1.5
SSR1P1-201ENST00000407630 RNF216Q9NWF9 866 aaPredicted RBP24.27■■□□□ 1.48
SSR1P1-201ENST00000407630 HOXD11P31277 338 aaPredicted RBP23.82■■□□□ 1.4
SSR1P1-201ENST00000407630 RTN4Q9NQC3 1192 aaKnown RBP23.79■■□□□ 1.4
SSR1P1-201ENST00000407630 SLC4A2P04920 1241 aa23.78■■□□□ 1.4
SSR1P1-201ENST00000407630 DMRT2Q9Y5R5 561 aa23.77■■□□□ 1.4
SSR1P1-201ENST00000407630 AMER1Q5JTC6 1135 aaPredicted RBP23.74■■□□□ 1.39
SSR1P1-201ENST00000407630 SLC24A1O60721 1099 aa23.72■■□□□ 1.39
SSR1P1-201ENST00000407630 ATXN8OSP0DMR3 200 aa23.55■■□□□ 1.36
SSR1P1-201ENST00000407630 MYCNP04198 464 aaPredicted RBP23.52■■□□□ 1.36
SSR1P1-201ENST00000407630 FKBP8Q14318 412 aa23.41■■□□□ 1.34
SSR1P1-201ENST00000407630 ATF5Q9Y2D1 282 aaPredicted RBP22.84■■□□□ 1.25
SSR1P1-201ENST00000407630 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.71■■□□□ 1.23
SSR1P1-201ENST00000407630 DCAF8L1A6NGE4 600 aa22.68■■□□□ 1.22
SSR1P1-201ENST00000407630 SAMD1Q6SPF0 538 aaPredicted RBP22.64■■□□□ 1.21
SSR1P1-201ENST00000407630 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.63■■□□□ 1.21
SSR1P1-201ENST00000407630 HNRNPUL2Q1KMD3 747 aaKnown RBP22.63■■□□□ 1.21
SSR1P1-201ENST00000407630 U3KPZ7 1027 aaPredicted RBP22.52■■□□□ 1.2
SSR1P1-201ENST00000407630 ZNF219Q9P2Y4 722 aaPredicted RBP22.28■■□□□ 1.16
SSR1P1-201ENST00000407630 FBXO3Q9UK99 471 aa22.16■■□□□ 1.14
SSR1P1-201ENST00000407630 SPDYE4A6NLX3 237 aa22.06■■□□□ 1.12
SSR1P1-201ENST00000407630 APLP2Q06481 763 aa22.06■■□□□ 1.12
SSR1P1-201ENST00000407630 MKRN4PQ13434 485 aaPredicted RBP21.92■■□□□ 1.1
SSR1P1-201ENST00000407630 PROM2Q8N271 834 aa21.9■■□□□ 1.1
SSR1P1-201ENST00000407630 PLCB2Q00722 1185 aa21.88■■□□□ 1.09
SSR1P1-201ENST00000407630 VASPP50552 380 aaPredicted RBP21.86■■□□□ 1.09
SSR1P1-201ENST00000407630 FBLN2P98095 1184 aa21.73■■□□□ 1.07
SSR1P1-201ENST00000407630 IFNLR1Q8IU57 520 aaPredicted RBP21.68■■□□□ 1.06
SSR1P1-201ENST00000407630 DCAF8L2P0C7V8 631 aa21.61■■□□□ 1.05
SSR1P1-201ENST00000407630 HAP1P54257 671 aaPredicted RBP21.59■■□□□ 1.05
SSR1P1-201ENST00000407630 TRHP20396 242 aaPredicted RBP21.55■■□□□ 1.04
SSR1P1-201ENST00000407630 POLA2Q14181 598 aa21.52■■□□□ 1.04
SSR1P1-201ENST00000407630 SPINK5Q9NQ38 1064 aaPredicted RBP21.5■■□□□ 1.03
SSR1P1-201ENST00000407630 PKD2Q13563 968 aa21.49■■□□□ 1.03
SSR1P1-201ENST00000407630 CAPN15O75808 1086 aa21.31■■□□□ 1
SSR1P1-201ENST00000407630 BCANQ96GW7 911 aa21.3■■□□□ 1
SSR1P1-201ENST00000407630 VSIG10Q8N0Z9 540 aa21.27■■□□□ 1
SSR1P1-201ENST00000407630 ZBTB12Q9Y330 459 aaPredicted RBP21.22■□□□□ 0.99
SSR1P1-201ENST00000407630 RNF39Q9H2S5 420 aa21.18■□□□□ 0.98
SSR1P1-201ENST00000407630 SPOCK2Q92563 424 aa21.17■□□□□ 0.98
SSR1P1-201ENST00000407630 KLHL34Q8N239 644 aa21.16■□□□□ 0.98
SSR1P1-201ENST00000407630 ECM2O94769 699 aaPredicted RBP21.1■□□□□ 0.97
SSR1P1-201ENST00000407630 BBXQ8WY36 941 aaPredicted RBP21.1■□□□□ 0.97
SSR1P1-201ENST00000407630 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.1■□□□□ 0.97
SSR1P1-201ENST00000407630 PRKCSHP14314 528 aaPredicted RBP21.07■□□□□ 0.96
SSR1P1-201ENST00000407630 ABCB7O75027 752 aa21.06■□□□□ 0.96
SSR1P1-201ENST00000407630 TAOK2Q9UL54 1235 aa21.04■□□□□ 0.96
SSR1P1-201ENST00000407630 NPM1P06748 294 aaKnown RBP eCLIP21.01■□□□□ 0.95
SSR1P1-201ENST00000407630 C1QBPQ07021 282 aaKnown RBP20.98■□□□□ 0.95
SSR1P1-201ENST00000407630 STAG3Q9UJ98 1225 aa20.98■□□□□ 0.95
SSR1P1-201ENST00000407630 PAXIP1Q6ZW49 1069 aaPredicted RBP20.97■□□□□ 0.95
SSR1P1-201ENST00000407630 KDM2AQ9Y2K7 1162 aa20.97■□□□□ 0.95
SSR1P1-201ENST00000407630 ZNF692Q9BU19 519 aaPredicted RBP20.92■□□□□ 0.94
SSR1P1-201ENST00000407630 CFAP44Q96MT7 982 aa20.91■□□□□ 0.94
SSR1P1-201ENST00000407630 PLCD3Q8N3E9 789 aa20.9■□□□□ 0.94
SSR1P1-201ENST00000407630 RGL2O15211 777 aa20.87■□□□□ 0.93
SSR1P1-201ENST00000407630 SSUH2Q9Y2M2 353 aa20.79■□□□□ 0.92
SSR1P1-201ENST00000407630 SPDYE2BA6NHP3 402 aa20.78■□□□□ 0.92
SSR1P1-201ENST00000407630 SPDYE6P0CI01 402 aa20.78■□□□□ 0.92
SSR1P1-201ENST00000407630 SPDYE2Q495Y8 402 aa20.78■□□□□ 0.92
SSR1P1-201ENST00000407630 MIER1Q8N108 512 aa20.77■□□□□ 0.92
SSR1P1-201ENST00000407630 OSCARQ8IYS5 282 aa20.74■□□□□ 0.91
SSR1P1-201ENST00000407630 SPRYD3Q8NCJ5 442 aa20.74■□□□□ 0.91
SSR1P1-201ENST00000407630 TPRNQ4KMQ1 711 aa20.73■□□□□ 0.91
SSR1P1-201ENST00000407630 PABPN1Q86U42 306 aaKnown RBP eCLIP20.71■□□□□ 0.91
SSR1P1-201ENST00000407630 TSHZ2Q9NRE2 1034 aa20.67■□□□□ 0.9
SSR1P1-201ENST00000407630 DSG3P32926 999 aa20.63■□□□□ 0.89
SSR1P1-201ENST00000407630 CIZ1Q9ULV3 898 aaPredicted RBP20.62■□□□□ 0.89
SSR1P1-201ENST00000407630 CHGAP10645 457 aaKnown RBP20.6■□□□□ 0.89
SSR1P1-201ENST00000407630 ZBTB47Q9UFB7 747 aaPredicted RBP20.53■□□□□ 0.88
SSR1P1-201ENST00000407630 PLEKHG5O94827 1062 aa20.51■□□□□ 0.87
SSR1P1-201ENST00000407630 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
SSR1P1-201ENST00000407630 HS6ST3Q8IZP7 471 aa20.38■□□□□ 0.85
SSR1P1-201ENST00000407630 DNAJC5Q9H3Z4 198 aa20.38■□□□□ 0.85
SSR1P1-201ENST00000407630 NBR1Q14596 966 aa20.29■□□□□ 0.84
SSR1P1-201ENST00000407630 RNF25Q96BH1 459 aaPredicted RBP20.25■□□□□ 0.83
SSR1P1-201ENST00000407630 GSE1Q14687 1217 aa20.22■□□□□ 0.83
SSR1P1-201ENST00000407630 NKX1-1Q15270 411 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms