Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.27■□□□□ 0.03
HLA-DRAP01903 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.27■□□□□ 0.03
HLA-DRAP01903 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRAP01903 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.27■□□□□ 0.03
HLA-DRAP01903 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
HLA-DRAP01903 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRAP01903 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 ELK2AP-201ENST00000392510 1007 ntBASIC15.26■□□□□ 0.03
HLA-DRAP01903 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 Z97180.1-201ENST00000445173 988 ntBASIC15.26■□□□□ 0.03
HLA-DRAP01903 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 AP001505.2-201ENST00000616815 443 ntBASIC15.26■□□□□ 0.03
HLA-DRAP01903 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DRAP01903 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRAP01903 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.25■□□□□ 0.03
HLA-DRAP01903 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 AL365181.3-201ENST00000605886 3222 ntBASIC15.25■□□□□ 0.03
HLA-DRAP01903 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.25■□□□□ 0.03
HLA-DRAP01903 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 BANF1P3-201ENST00000412556 261 ntBASIC15.25■□□□□ 0.03
HLA-DRAP01903 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 PHBP15-201ENST00000574228 665 ntBASIC15.25■□□□□ 0.03
HLA-DRAP01903 RN7SL455P-201ENST00000580629 282 ntBASIC15.25■□□□□ 0.03
HLA-DRAP01903 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 LINC01783-202ENST00000614408 828 ntBASIC15.25■□□□□ 0.03
HLA-DRAP01903 BX284668.2-205ENST00000619677 828 ntBASIC15.25■□□□□ 0.03
HLA-DRAP01903 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 AC089987.1-201ENST00000551654 2209 ntBASIC15.25■□□□□ 0.03
HLA-DRAP01903 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DRAP01903 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DRAP01903 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DRAP01903 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DRAP01903 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DRAP01903 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms