RNA–Protein interactions for RNA: ENST00000369653.8

UBL4A-201, Transcript of ubiquitin like 4A, humanhuman

TSL 3 BASIC

Gene UBL4A, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-201ENST00000369653 NISCHQ9Y2I1 1504 aa35.15■■■■□ 3.22
UBL4A-201ENST00000369653 ABCC9O60706 1549 aa31.85■■■□□ 2.69
UBL4A-201ENST00000369653 CCDC180Q9P1Z9 1646 aa31.66■■■□□ 2.66
UBL4A-201ENST00000369653 RB1CC1Q8TDY2 1594 aa30.16■■■□□ 2.42
UBL4A-201ENST00000369653 DNAJC5BQ9UF47 199 aa29.99■■■□□ 2.39
UBL4A-201ENST00000369653 NACADO15069 1562 aa29.87■■■□□ 2.37
UBL4A-201ENST00000369653 UNC13AQ9UPW8 1703 aa29.74■■■□□ 2.35
UBL4A-201ENST00000369653 DCAF8L2P0C7V8 631 aa29.72■■■□□ 2.35
UBL4A-201ENST00000369653 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.33
UBL4A-201ENST00000369653 BICRAQ9NZM4 1560 aa29.39■■■□□ 2.3
UBL4A-201ENST00000369653 MYO15BQ96JP2 1530 aa29.32■■■□□ 2.28
UBL4A-201ENST00000369653 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
UBL4A-201ENST00000369653 SCRIBQ14160 1630 aa28.95■■■□□ 2.23
UBL4A-201ENST00000369653 DCAF1Q9Y4B6 1507 aa28.93■■■□□ 2.22
UBL4A-201ENST00000369653 CC2D2AQ9P2K1 1620 aa28.77■■■□□ 2.2
UBL4A-201ENST00000369653 SHROOM4Q9ULL8 1493 aa28.75■■■□□ 2.19
UBL4A-201ENST00000369653 EIF4G1Q04637 1599 aaKnown RBP28.64■■■□□ 2.18
UBL4A-201ENST00000369653 CECR2Q9BXF3 1484 aa28.64■■■□□ 2.17
UBL4A-201ENST00000369653 NCAPD3P42695 1498 aa27.54■■■□□ 2
UBL4A-201ENST00000369653 SMARCA4P51532 1647 aa27.52■■■□□ 2
UBL4A-201ENST00000369653 DNAJC5Q9H3Z4 198 aa27.52■■■□□ 2
UBL4A-201ENST00000369653 ATAD2BQ9ULI0 1458 aa27.51■■□□□ 1.99
UBL4A-201ENST00000369653 ERCC6Q03468 1493 aa27.45■■□□□ 1.99
UBL4A-201ENST00000369653 SMARCA2P51531 1590 aa27.4■■□□□ 1.98
UBL4A-201ENST00000369653 HMGXB3Q12766 1538 aa27.4■■□□□ 1.98
UBL4A-201ENST00000369653 CUX2O14529 1486 aa27.38■■□□□ 1.97
UBL4A-201ENST00000369653 NESP48681 1621 aa27.35■■□□□ 1.97
UBL4A-201ENST00000369653 BAZ1AQ9NRL2 1556 aaPredicted RBP27.27■■□□□ 1.96
UBL4A-201ENST00000369653 BAZ1BQ9UIG0 1483 aaKnown RBP27.25■■□□□ 1.95
UBL4A-201ENST00000369653 PEG3Q9GZU2 1588 aa27.17■■□□□ 1.94
UBL4A-201ENST00000369653 MROH2BQ7Z745 1585 aa27.15■■□□□ 1.94
UBL4A-201ENST00000369653 THOC2Q8NI27 1593 aaKnown RBP27.12■■□□□ 1.93
UBL4A-201ENST00000369653 KIF21AQ7Z4S6 1674 aa27.08■■□□□ 1.93
UBL4A-201ENST00000369653 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.92
UBL4A-201ENST00000369653 WIZO95785 1651 aa26.89■■□□□ 1.9
UBL4A-201ENST00000369653 PDS5BQ9NTI5 1447 aa26.79■■□□□ 1.88
UBL4A-201ENST00000369653 CADPSQ9ULU8 1353 aa26.7■■□□□ 1.86
UBL4A-201ENST00000369653 MRC2Q9UBG0 1479 aa26.66■■□□□ 1.86
UBL4A-201ENST00000369653 WDR62O43379 1518 aa26.62■■□□□ 1.85
UBL4A-201ENST00000369653 CEP164Q9UPV0 1460 aa26.52■■□□□ 1.84
UBL4A-201ENST00000369653 FANCD2Q9BXW9 1451 aa26.48■■□□□ 1.83
UBL4A-201ENST00000369653 RSF1Q96T23 1441 aaPredicted RBP26.45■■□□□ 1.82
UBL4A-201ENST00000369653 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
UBL4A-201ENST00000369653 CFTRP13569 1480 aa26.4■■□□□ 1.82
UBL4A-201ENST00000369653 TRIM41Q8WV44 630 aa26.38■■□□□ 1.81
UBL4A-201ENST00000369653 PRDM2Q13029 1718 aa26.34■■□□□ 1.81
UBL4A-201ENST00000369653 URB2Q14146 1524 aaKnown RBP26.33■■□□□ 1.81
UBL4A-201ENST00000369653 CCDC88BA6NC98 1476 aa26.12■■□□□ 1.77
UBL4A-201ENST00000369653 ZNF608Q9ULD9 1512 aaPredicted RBP26.04■■□□□ 1.76
UBL4A-201ENST00000369653 OSCARQ8IYS5 282 aa26.04■■□□□ 1.76
UBL4A-201ENST00000369653 TOPBP1Q92547 1522 aa25.98■■□□□ 1.75
UBL4A-201ENST00000369653 RIMBP3CA6NJZ7 1639 aa25.96■■□□□ 1.75
UBL4A-201ENST00000369653 RIMBP3BA6NNM3 1639 aa25.96■■□□□ 1.75
UBL4A-201ENST00000369653 RIMBP3Q9UFD9 1639 aa25.96■■□□□ 1.75
UBL4A-201ENST00000369653 IFT140Q96RY7 1462 aa25.95■■□□□ 1.74
UBL4A-201ENST00000369653 EIF4G3O43432 1585 aaKnown RBP25.93■■□□□ 1.74
UBL4A-201ENST00000369653 DNMBPQ6XZF7 1577 aa25.88■■□□□ 1.73
UBL4A-201ENST00000369653 CHD1O14646 1710 aa25.85■■□□□ 1.73
UBL4A-201ENST00000369653 TARBP1Q13395 1621 aaKnown RBP25.81■■□□□ 1.72
UBL4A-201ENST00000369653 ARHGEF11O15085 1522 aa25.78■■□□□ 1.72
UBL4A-201ENST00000369653 ABCC8Q09428 1581 aa25.76■■□□□ 1.71
UBL4A-201ENST00000369653 AQRO60306 1485 aaKnown RBP eCLIP25.74■■□□□ 1.716e-6■■■■□ 25.1
UBL4A-201ENST00000369653 POLA1P09884 1462 aaPredicted RBP25.71■■□□□ 1.71
UBL4A-201ENST00000369653 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
UBL4A-201ENST00000369653 SUPT5HO00267 1087 aaKnown RBP25.58■■□□□ 1.69
UBL4A-201ENST00000369653 FBLN2P98095 1184 aa25.57■■□□□ 1.68
UBL4A-201ENST00000369653 ARAP1Q96P48 1450 aa25.55■■□□□ 1.68
UBL4A-201ENST00000369653 TDRD9Q8NDG6 1382 aaKnown RBP25.55■■□□□ 1.68
UBL4A-201ENST00000369653 FGD5Q6ZNL6 1462 aa25.54■■□□□ 1.68
UBL4A-201ENST00000369653 CYB5RLQ6IPT4 315 aa25.53■■□□□ 1.68
UBL4A-201ENST00000369653 CUX1P39880 1505 aa25.53■■□□□ 1.68
UBL4A-201ENST00000369653 SOGA1O94964 1423 aa25.52■■□□□ 1.68
UBL4A-201ENST00000369653 SNAPC4Q5SXM2 1469 aa25.5■■□□□ 1.67
UBL4A-201ENST00000369653 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
UBL4A-201ENST00000369653 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
UBL4A-201ENST00000369653 CLASP1Q7Z460 1538 aa25.41■■□□□ 1.66
UBL4A-201ENST00000369653 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
UBL4A-201ENST00000369653 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
UBL4A-201ENST00000369653 GRIN2BQ13224 1484 aa25.33■■□□□ 1.65
UBL4A-201ENST00000369653 TRHP20396 242 aaPredicted RBP25.31■■□□□ 1.64
UBL4A-201ENST00000369653 CHMP7Q8WUX9 453 aaPredicted RBP25.28■■□□□ 1.64
UBL4A-201ENST00000369653 SYNJ2O15056 1496 aa25.27■■□□□ 1.64
UBL4A-201ENST00000369653 ABCA5Q8WWZ7 1642 aa25.26■■□□□ 1.63
UBL4A-201ENST00000369653 GAPVD1Q14C86 1478 aa25.24■■□□□ 1.63
UBL4A-201ENST00000369653 ABCA10Q8WWZ4 1543 aa25.18■■□□□ 1.62
UBL4A-201ENST00000369653 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
UBL4A-201ENST00000369653 ADAMTS12P58397 1594 aa25.09■■□□□ 1.61
UBL4A-201ENST00000369653 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.61
UBL4A-201ENST00000369653 CEP170Q5SW79 1584 aa25.05■■□□□ 1.6
UBL4A-201ENST00000369653 GRIN2AQ12879 1464 aa25.04■■□□□ 1.6
UBL4A-201ENST00000369653 TOP2BQ02880 1626 aa25.04■■□□□ 1.6
UBL4A-201ENST00000369653 WRNQ14191 1432 aaPredicted RBP eCLIP25■■□□□ 1.59
UBL4A-201ENST00000369653 NUP160Q12769 1436 aa24.93■■□□□ 1.58
UBL4A-201ENST00000369653 SHROOM2Q13796 1616 aa24.92■■□□□ 1.58
UBL4A-201ENST00000369653 FHAD1B1AJZ9 1412 aa24.86■■□□□ 1.57
UBL4A-201ENST00000369653 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
UBL4A-201ENST00000369653 KIF13AQ9H1H9 1805 aa24.79■■□□□ 1.56
UBL4A-201ENST00000369653 RUSC2Q8N2Y8 1516 aa24.75■■□□□ 1.55
UBL4A-201ENST00000369653 PRG4Q92954 1404 aaPredicted RBP24.71■■□□□ 1.55
UBL4A-201ENST00000369653 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms