RNA–Protein interactions for RNA: ENST00000562713.3

CMC2-204, Transcript of C-X9-C motif containing 2, humanhuman

TSL 3 BASIC

Gene CMC2, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-204ENST00000562713 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
CMC2-204ENST00000562713 CCDC180Q9P1Z9 1646 aa29.55■■■□□ 2.32
CMC2-204ENST00000562713 ABCC9O60706 1549 aa28.23■■■□□ 2.11
CMC2-204ENST00000562713 ZCCHC6Q5VYS8 1495 aaKnown RBP27.89■■■□□ 2.05
CMC2-204ENST00000562713 DCAF8L2P0C7V8 631 aa27.6■■■□□ 2.01
CMC2-204ENST00000562713 DCAF1Q9Y4B6 1507 aa27.6■■■□□ 2.01
CMC2-204ENST00000562713 NACADO15069 1562 aa27.54■■■□□ 2
CMC2-204ENST00000562713 MYO15BQ96JP2 1530 aa27.5■■□□□ 1.99
CMC2-204ENST00000562713 RB1CC1Q8TDY2 1594 aa27.48■■□□□ 1.99
CMC2-204ENST00000562713 UNC13AQ9UPW8 1703 aa27.03■■□□□ 1.92
CMC2-204ENST00000562713 SCRIBQ14160 1630 aa26.97■■□□□ 1.91
CMC2-204ENST00000562713 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
CMC2-204ENST00000562713 BICRAQ9NZM4 1560 aa26.57■■□□□ 1.84
CMC2-204ENST00000562713 PABPN1Q86U42 306 aaKnown RBP eCLIP26.39■■□□□ 1.82
CMC2-204ENST00000562713 CECR2Q9BXF3 1484 aa25.86■■□□□ 1.73
CMC2-204ENST00000562713 BAZ1AQ9NRL2 1556 aaPredicted RBP25.85■■□□□ 1.73
CMC2-204ENST00000562713 EIF4G1Q04637 1599 aaKnown RBP25.84■■□□□ 1.73
CMC2-204ENST00000562713 SMARCA4P51532 1647 aa25.83■■□□□ 1.73
CMC2-204ENST00000562713 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
CMC2-204ENST00000562713 CC2D2AQ9P2K1 1620 aa25.63■■□□□ 1.69
CMC2-204ENST00000562713 WIZO95785 1651 aa25.55■■□□□ 1.68
CMC2-204ENST00000562713 RSF1Q96T23 1441 aaPredicted RBP25.54■■□□□ 1.68
CMC2-204ENST00000562713 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
CMC2-204ENST00000562713 PEG3Q9GZU2 1588 aa25.52■■□□□ 1.68
CMC2-204ENST00000562713 ATAD2BQ9ULI0 1458 aa25.43■■□□□ 1.66
CMC2-204ENST00000562713 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
CMC2-204ENST00000562713 HMGXB3Q12766 1538 aa25.33■■□□□ 1.65
CMC2-204ENST00000562713 BAZ1BQ9UIG0 1483 aaKnown RBP25.32■■□□□ 1.64
CMC2-204ENST00000562713 NCAPD3P42695 1498 aa25.31■■□□□ 1.64
CMC2-204ENST00000562713 TOP2AP11388 1531 aaKnown RBP25.27■■□□□ 1.64
CMC2-204ENST00000562713 DNAJC5BQ9UF47 199 aa25.24■■□□□ 1.63
CMC2-204ENST00000562713 CCDC88BA6NC98 1476 aa24.9■■□□□ 1.58
CMC2-204ENST00000562713 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
CMC2-204ENST00000562713 LAMC3Q9Y6N6 1575 aa24.68■■□□□ 1.54
CMC2-204ENST00000562713 CADPSQ9ULU8 1353 aa24.6■■□□□ 1.53
CMC2-204ENST00000562713 CFTRP13569 1480 aa24.59■■□□□ 1.53
CMC2-204ENST00000562713 NESP48681 1621 aa24.58■■□□□ 1.53
CMC2-204ENST00000562713 KIF21AQ7Z4S6 1674 aa24.49■■□□□ 1.51
CMC2-204ENST00000562713 PDS5BQ9NTI5 1447 aa24.41■■□□□ 1.5
CMC2-204ENST00000562713 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
CMC2-204ENST00000562713 ERCC6Q03468 1493 aa24.33■■□□□ 1.49
CMC2-204ENST00000562713 CEP164Q9UPV0 1460 aa24.33■■□□□ 1.49
CMC2-204ENST00000562713 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
CMC2-204ENST00000562713 ABCC8Q09428 1581 aa24.25■■□□□ 1.47
CMC2-204ENST00000562713 THOC2Q8NI27 1593 aaKnown RBP24.18■■□□□ 1.46
CMC2-204ENST00000562713 MRC2Q9UBG0 1479 aa24.15■■□□□ 1.46
CMC2-204ENST00000562713 BIVM-ERCC5R4GMW8 1640 aa24.13■■□□□ 1.45
CMC2-204ENST00000562713 DNMBPQ6XZF7 1577 aa24.13■■□□□ 1.45
CMC2-204ENST00000562713 WRNQ14191 1432 aaPredicted RBP eCLIP24.13■■□□□ 1.45
CMC2-204ENST00000562713 SYNJ1O43426 1573 aa24.1■■□□□ 1.45
CMC2-204ENST00000562713 URB2Q14146 1524 aaKnown RBP24.1■■□□□ 1.45
CMC2-204ENST00000562713 TOP2BQ02880 1626 aa24.09■■□□□ 1.45
CMC2-204ENST00000562713 CUX1P39880 1505 aa24.09■■□□□ 1.45
CMC2-204ENST00000562713 WDR62O43379 1518 aa24.07■■□□□ 1.44
CMC2-204ENST00000562713 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
CMC2-204ENST00000562713 CHIC1Q5VXU3 224 aa23.94■■□□□ 1.42
CMC2-204ENST00000562713 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
CMC2-204ENST00000562713 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
CMC2-204ENST00000562713 POLA1P09884 1462 aaPredicted RBP23.88■■□□□ 1.41
CMC2-204ENST00000562713 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
CMC2-204ENST00000562713 CUX2O14529 1486 aa23.82■■□□□ 1.4
CMC2-204ENST00000562713 TARBP1Q13395 1621 aaKnown RBP23.8■■□□□ 1.4
CMC2-204ENST00000562713 SOGA1O94964 1423 aa23.77■■□□□ 1.4
CMC2-204ENST00000562713 IFT140Q96RY7 1462 aa23.76■■□□□ 1.39
CMC2-204ENST00000562713 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
CMC2-204ENST00000562713 ABCA10Q8WWZ4 1543 aa23.7■■□□□ 1.38
CMC2-204ENST00000562713 PBRM1Q86U86 1689 aa23.65■■□□□ 1.38
CMC2-204ENST00000562713 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
CMC2-204ENST00000562713 ABCA5Q8WWZ7 1642 aa23.64■■□□□ 1.38
CMC2-204ENST00000562713 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
CMC2-204ENST00000562713 KIF27Q86VH2 1401 aa23.58■■□□□ 1.36
CMC2-204ENST00000562713 TDRD9Q8NDG6 1382 aaKnown RBP23.54■■□□□ 1.36
CMC2-204ENST00000562713 GAPVD1Q14C86 1478 aa23.54■■□□□ 1.36
CMC2-204ENST00000562713 EEA1Q15075 1411 aa23.52■■□□□ 1.36
CMC2-204ENST00000562713 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
CMC2-204ENST00000562713 AQRO60306 1485 aaKnown RBP eCLIP23.51■■□□□ 1.35
CMC2-204ENST00000562713 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
CMC2-204ENST00000562713 CUL7Q14999 1698 aa23.47■■□□□ 1.35
CMC2-204ENST00000562713 GRIN2BQ13224 1484 aa23.45■■□□□ 1.34
CMC2-204ENST00000562713 FAM9AQ8IZU1 332 aaPredicted RBP23.43■■□□□ 1.34
CMC2-204ENST00000562713 ADAMTS12P58397 1594 aa23.37■■□□□ 1.33
CMC2-204ENST00000562713 SNAPC4Q5SXM2 1469 aa23.36■■□□□ 1.33
CMC2-204ENST00000562713 MAGI1Q96QZ7 1491 aaPredicted RBP23.36■■□□□ 1.33
CMC2-204ENST00000562713 IGF1RP08069 1367 aa23.33■■□□□ 1.33
CMC2-204ENST00000562713 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.33
CMC2-204ENST00000562713 CHD1O14646 1710 aa23.33■■□□□ 1.32
CMC2-204ENST00000562713 KIF21BO75037 1637 aa23.31■■□□□ 1.32
CMC2-204ENST00000562713 FHAD1B1AJZ9 1412 aa23.26■■□□□ 1.31
CMC2-204ENST00000562713 CARMIL1Q5VZK9 1371 aa23.25■■□□□ 1.31
CMC2-204ENST00000562713 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
CMC2-204ENST00000562713 PRXQ9BXM0 1461 aa23.23■■□□□ 1.31
CMC2-204ENST00000562713 RAPGEF2Q9Y4G8 1499 aa23.23■■□□□ 1.31
CMC2-204ENST00000562713 CTTNBP2Q8WZ74 1663 aa23.2■■□□□ 1.3
CMC2-204ENST00000562713 GOLGA3Q08378 1498 aa23.17■■□□□ 1.3
CMC2-204ENST00000562713 GRIN2AQ12879 1464 aa23.17■■□□□ 1.3
CMC2-204ENST00000562713 FBLN2P98095 1184 aa23.15■■□□□ 1.3
CMC2-204ENST00000562713 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
CMC2-204ENST00000562713 EHMT2Q96KQ7 1210 aa23.11■■□□□ 1.29
CMC2-204ENST00000562713 CEP170Q5SW79 1584 aa23.06■■□□□ 1.28
CMC2-204ENST00000562713 UBTFP17480 764 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms