Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TGFAP01135 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TGFAP01135 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.62■□□□□ 0.57
TGFAP01135 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
TGFAP01135 AC145676.1-201ENST00000514988 2004 ntBASIC18.62■□□□□ 0.57
TGFAP01135 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.62■□□□□ 0.57
TGFAP01135 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TGFAP01135 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TGFAP01135 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TGFAP01135 HLA-L-211ENST00000482052 1765 ntBASIC18.61■□□□□ 0.57
TGFAP01135 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TGFAP01135 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.61■□□□□ 0.57
TGFAP01135 AC034268.1-201ENST00000441047 882 ntBASIC18.61■□□□□ 0.57
TGFAP01135 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.61■□□□□ 0.57
TGFAP01135 AC091060.1-201ENST00000623524 1766 ntBASIC18.6■□□□□ 0.57
TGFAP01135 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TGFAP01135 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TGFAP01135 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TGFAP01135 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TGFAP01135 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TGFAP01135 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.6■□□□□ 0.57
TGFAP01135 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TGFAP01135 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.6■□□□□ 0.57
TGFAP01135 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.6■□□□□ 0.57
TGFAP01135 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.6■□□□□ 0.57
TGFAP01135 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TGFAP01135 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TGFAP01135 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TGFAP01135 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TGFAP01135 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TGFAP01135 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TGFAP01135 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TGFAP01135 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TGFAP01135 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TGFAP01135 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TGFAP01135 TSPY26P-201ENST00000476365 1326 ntBASIC18.59■□□□□ 0.57
TGFAP01135 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TGFAP01135 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TGFAP01135 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TGFAP01135 ALDH1A3-203ENST00000557963 1670 ntBASIC18.59■□□□□ 0.57
TGFAP01135 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TGFAP01135 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.59■□□□□ 0.57
TGFAP01135 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.58■□□□□ 0.57
TGFAP01135 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TGFAP01135 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TGFAP01135 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.58■□□□□ 0.57
TGFAP01135 AC135731.1-201ENST00000569415 2548 ntBASIC18.58■□□□□ 0.57
TGFAP01135 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.58■□□□□ 0.56
TGFAP01135 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TGFAP01135 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TGFAP01135 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.58■□□□□ 0.56
TGFAP01135 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TGFAP01135 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TGFAP01135 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TGFAP01135 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TGFAP01135 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TGFAP01135 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.57■□□□□ 0.56
TGFAP01135 AC141586.4-201ENST00000624558 1573 ntBASIC18.57■□□□□ 0.56
TGFAP01135 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TGFAP01135 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TGFAP01135 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.57■□□□□ 0.56
TGFAP01135 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TGFAP01135 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TGFAP01135 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TGFAP01135 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.57■□□□□ 0.56
TGFAP01135 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TGFAP01135 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TGFAP01135 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TGFAP01135 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TGFAP01135 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TGFAP01135 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TGFAP01135 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TGFAP01135 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.56■□□□□ 0.56
TGFAP01135 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TGFAP01135 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.56■□□□□ 0.56
TGFAP01135 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.56■□□□□ 0.56
TGFAP01135 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.56■□□□□ 0.56
TGFAP01135 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.56■□□□□ 0.56
TGFAP01135 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TGFAP01135 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TGFAP01135 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TGFAP01135 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TGFAP01135 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.55■□□□□ 0.56
TGFAP01135 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.55■□□□□ 0.56
TGFAP01135 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TGFAP01135 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TGFAP01135 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TGFAP01135 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TGFAP01135 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TGFAP01135 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TGFAP01135 YBX1P1-201ENST00000445822 960 ntBASIC18.55■□□□□ 0.56
TGFAP01135 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
TGFAP01135 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TGFAP01135 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.54■□□□□ 0.56
TGFAP01135 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
TGFAP01135 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TGFAP01135 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
TGFAP01135 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TGFAP01135 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.54■□□□□ 0.56
TGFAP01135 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms