Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 AC244517.3-201ENST00000616254 1235 ntBASIC25.1■■□□□ 1.61
SPDYE4A6NLX3 AL589935.2-201ENST00000616471 1231 ntBASIC25.1■■□□□ 1.61
SPDYE4A6NLX3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC25.1■■□□□ 1.61
SPDYE4A6NLX3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE4A6NLX3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SPDYE4A6NLX3 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SPDYE4A6NLX3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 C1orf229-201ENST00000623686 2258 ntBASIC25.09■■□□□ 1.61
SPDYE4A6NLX3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SPDYE4A6NLX3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
SPDYE4A6NLX3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPDYE4A6NLX3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.08■■□□□ 1.61
SPDYE4A6NLX3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC25.08■■□□□ 1.61
SPDYE4A6NLX3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
SPDYE4A6NLX3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
SPDYE4A6NLX3 AL356740.2-201ENST00000601559 647 ntBASIC25.08■■□□□ 1.61
SPDYE4A6NLX3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.08■■□□□ 1.61
SPDYE4A6NLX3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPDYE4A6NLX3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SPDYE4A6NLX3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
SPDYE4A6NLX3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
SPDYE4A6NLX3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.08■■□□□ 1.6
SPDYE4A6NLX3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 MIR6724-1-201ENST00000616420 92 ntBASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 MIR6724-2-201ENST00000616483 92 ntBASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 MIR6724-4-201ENST00000617390 92 ntBASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 MIR6724-3-201ENST00000622482 92 ntBASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 AL117332.1-201ENST00000622628 974 ntBASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SPDYE4A6NLX3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SPDYE4A6NLX3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
SPDYE4A6NLX3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
SPDYE4A6NLX3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
SPDYE4A6NLX3 AC011551.1-201ENST00000614101 683 ntBASIC25.06■■□□□ 1.6
SPDYE4A6NLX3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SPDYE4A6NLX3 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.06■■□□□ 1.6
SPDYE4A6NLX3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC25.06■■□□□ 1.6
SPDYE4A6NLX3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE4A6NLX3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE4A6NLX3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE4A6NLX3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE4A6NLX3 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.05■■□□□ 1.6
SPDYE4A6NLX3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE4A6NLX3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SPDYE4A6NLX3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE4A6NLX3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE4A6NLX3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE4A6NLX3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SPDYE4A6NLX3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SPDYE4A6NLX3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
SPDYE4A6NLX3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE4A6NLX3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE4A6NLX3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.03■■□□□ 1.6
SPDYE4A6NLX3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.03■■□□□ 1.6
SPDYE4A6NLX3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE4A6NLX3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE4A6NLX3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE4A6NLX3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SPDYE4A6NLX3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.02■■□□□ 1.6
SPDYE4A6NLX3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SPDYE4A6NLX3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SPDYE4A6NLX3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms