RNA–Protein interactions for RNA: ENST00000639120.1

KCNMA1-252, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5 BASIC

Gene KCNMA1, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-252ENST00000639120 NISCHQ9Y2I1 1504 aa42.15■■■■■ 4.34
KCNMA1-252ENST00000639120 CCDC180Q9P1Z9 1646 aa36.85■■■■□ 3.49
KCNMA1-252ENST00000639120 ZCCHC6Q5VYS8 1495 aaKnown RBP35.36■■■■□ 3.25
KCNMA1-252ENST00000639120 ABCC9O60706 1549 aa35.02■■■■□ 3.2
KCNMA1-252ENST00000639120 HRCP23327 699 aa34.99■■■■□ 3.19
KCNMA1-252ENST00000639120 DCAF8L2P0C7V8 631 aa34.98■■■■□ 3.19
KCNMA1-252ENST00000639120 DCAF1Q9Y4B6 1507 aa34.86■■■■□ 3.17
KCNMA1-252ENST00000639120 MYO15BQ96JP2 1530 aa34.53■■■■□ 3.12
KCNMA1-252ENST00000639120 SHROOM4Q9ULL8 1493 aa34.51■■■■□ 3.11
KCNMA1-252ENST00000639120 NACADO15069 1562 aa34.39■■■■□ 3.1
KCNMA1-252ENST00000639120 SUPT5HO00267 1087 aaKnown RBP34.35■■■■□ 3.09
KCNMA1-252ENST00000639120 PPARGC1BQ86YN6 1023 aaKnown RBP34.21■■■■□ 3.07
KCNMA1-252ENST00000639120 PCGF6Q9BYE7 350 aa34.17■■■■□ 3.06
KCNMA1-252ENST00000639120 RB1CC1Q8TDY2 1594 aa34.16■■■■□ 3.06
KCNMA1-252ENST00000639120 CHIC1Q5VXU3 224 aa33.95■■■■□ 3.03
KCNMA1-252ENST00000639120 SCRIBQ14160 1630 aa33.86■■■■□ 3.01
KCNMA1-252ENST00000639120 PELP1Q8IZL8 1130 aaKnown RBP33.69■■■□□ 2.98
KCNMA1-252ENST00000639120 UNC13AQ9UPW8 1703 aa33.31■■■□□ 2.92
KCNMA1-252ENST00000639120 TRIM26Q12899 539 aaPredicted RBP33.13■■■□□ 2.89
KCNMA1-252ENST00000639120 SCAF1Q9H7N4 1312 aaKnown RBP33.1■■■□□ 2.89
KCNMA1-252ENST00000639120 LOC105371045A0A1W2PR82 267 aa33.1■■■□□ 2.89
KCNMA1-252ENST00000639120 BICRAQ9NZM4 1560 aa33.01■■■□□ 2.88
KCNMA1-252ENST00000639120 PABPN1Q86U42 306 aaKnown RBP eCLIP32.99■■■□□ 2.87
KCNMA1-252ENST00000639120 ZEB1P37275 1124 aaPredicted RBP32.85■■■□□ 2.85
KCNMA1-252ENST00000639120 CECR2Q9BXF3 1484 aa32.73■■■□□ 2.83
KCNMA1-252ENST00000639120 RSF1Q96T23 1441 aaPredicted RBP32.62■■■□□ 2.81
KCNMA1-252ENST00000639120 BAZ1AQ9NRL2 1556 aaPredicted RBP32.61■■■□□ 2.81
KCNMA1-252ENST00000639120 MROH2BQ7Z745 1585 aa32.53■■■□□ 2.8
KCNMA1-252ENST00000639120 SMARCA4P51532 1647 aa32.43■■■□□ 2.78
KCNMA1-252ENST00000639120 MYT1Q01538 1121 aa32.36■■■□□ 2.77
KCNMA1-252ENST00000639120 ACIN1Q9UKV3 1341 aaKnown RBP32.27■■■□□ 2.76
KCNMA1-252ENST00000639120 WIZO95785 1651 aa32.24■■■□□ 2.75
KCNMA1-252ENST00000639120 NEUROD1Q13562 356 aa32.17■■■□□ 2.74
KCNMA1-252ENST00000639120 EIF4G1Q04637 1599 aaKnown RBP32.09■■■□□ 2.73
KCNMA1-252ENST00000639120 PEG3Q9GZU2 1588 aa32.03■■■□□ 2.72
KCNMA1-252ENST00000639120 SMARCA2P51531 1590 aa31.98■■■□□ 2.71
KCNMA1-252ENST00000639120 TOP2AP11388 1531 aaKnown RBP31.97■■■□□ 2.71
KCNMA1-252ENST00000639120 GTF3C3Q9Y5Q9 886 aa31.96■■■□□ 2.71
KCNMA1-252ENST00000639120 ATAD2BQ9ULI0 1458 aa31.96■■■□□ 2.71
KCNMA1-252ENST00000639120 BAZ1BQ9UIG0 1483 aaKnown RBP31.82■■■□□ 2.68
KCNMA1-252ENST00000639120 TRIM41Q8WV44 630 aa31.79■■■□□ 2.68
KCNMA1-252ENST00000639120 CENPBP07199 599 aaPredicted RBP31.77■■■□□ 2.68
KCNMA1-252ENST00000639120 NCAPD3P42695 1498 aa31.73■■■□□ 2.67
KCNMA1-252ENST00000639120 FAM9AQ8IZU1 332 aaPredicted RBP31.72■■■□□ 2.67
KCNMA1-252ENST00000639120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.67■■■□□ 2.66
KCNMA1-252ENST00000639120 DIEXFQ68CQ4 756 aaKnown RBP31.67■■■□□ 2.66
KCNMA1-252ENST00000639120 HMGXB3Q12766 1538 aa31.67■■■□□ 2.66
KCNMA1-252ENST00000639120 CC2D2AQ9P2K1 1620 aa31.66■■■□□ 2.66
KCNMA1-252ENST00000639120 CCDC88BA6NC98 1476 aa31.62■■■□□ 2.65
KCNMA1-252ENST00000639120 CCER1Q8TC90 406 aaPredicted RBP31.58■■■□□ 2.65
KCNMA1-252ENST00000639120 EHMT2Q96KQ7 1210 aa31.52■■■□□ 2.64
KCNMA1-252ENST00000639120 ZNF316A6NFI3 1004 aaPredicted RBP31.09■■■□□ 2.57
KCNMA1-252ENST00000639120 YTHDC1Q96MU7 727 aaKnown RBP31.07■■■□□ 2.56
KCNMA1-252ENST00000639120 CFTRP13569 1480 aa30.97■■■□□ 2.55
KCNMA1-252ENST00000639120 DNAJC5BQ9UF47 199 aa30.96■■■□□ 2.55
KCNMA1-252ENST00000639120 CADPSQ9ULU8 1353 aa30.92■■■□□ 2.54
KCNMA1-252ENST00000639120 WRNQ14191 1432 aaPredicted RBP eCLIP30.92■■■□□ 2.54
KCNMA1-252ENST00000639120 MIER1Q8N108 512 aa30.89■■■□□ 2.54
KCNMA1-252ENST00000639120 ABCC8Q09428 1581 aa30.87■■■□□ 2.53
KCNMA1-252ENST00000639120 TTBK1Q5TCY1 1321 aaPredicted RBP30.82■■■□□ 2.52
KCNMA1-252ENST00000639120 PRDM2Q13029 1718 aa30.76■■■□□ 2.51
KCNMA1-252ENST00000639120 LAMC3Q9Y6N6 1575 aa30.69■■■□□ 2.5
KCNMA1-252ENST00000639120 CEP162Q5TB80 1403 aa30.66■■■□□ 2.5
KCNMA1-252ENST00000639120 NESP48681 1621 aa30.64■■■□□ 2.5
KCNMA1-252ENST00000639120 FANCD2Q9BXW9 1451 aa30.58■■■□□ 2.49
KCNMA1-252ENST00000639120 SYNJ1O43426 1573 aa30.57■■■□□ 2.48
KCNMA1-252ENST00000639120 PDS5BQ9NTI5 1447 aa30.51■■■□□ 2.47
KCNMA1-252ENST00000639120 TOP2BQ02880 1626 aa30.5■■■□□ 2.47
KCNMA1-252ENST00000639120 SUPT16HQ9Y5B9 1047 aaKnown RBP30.47■■■□□ 2.47
KCNMA1-252ENST00000639120 TNIKQ9UKE5 1360 aa30.46■■■□□ 2.47
KCNMA1-252ENST00000639120 BIVM-ERCC5R4GMW8 1640 aa30.45■■■□□ 2.47
KCNMA1-252ENST00000639120 CUX1P39880 1505 aa30.43■■■□□ 2.46
KCNMA1-252ENST00000639120 CLSPNQ9HAW4 1339 aa30.43■■■□□ 2.46
KCNMA1-252ENST00000639120 CEP164Q9UPV0 1460 aa30.42■■■□□ 2.46
KCNMA1-252ENST00000639120 ANP32EQ9BTT0 268 aa30.4■■■□□ 2.46
KCNMA1-252ENST00000639120 TSHZ2Q9NRE2 1034 aa30.36■■■□□ 2.45
KCNMA1-252ENST00000639120 BCL11AQ9H165 835 aa30.32■■■□□ 2.44
KCNMA1-252ENST00000639120 SOGA1O94964 1423 aa30.28■■■□□ 2.44
KCNMA1-252ENST00000639120 EEA1Q15075 1411 aa30.28■■■□□ 2.44
KCNMA1-252ENST00000639120 DNMBPQ6XZF7 1577 aa30.26■■■□□ 2.44
KCNMA1-252ENST00000639120 KIF21AQ7Z4S6 1674 aa30.26■■■□□ 2.43
KCNMA1-252ENST00000639120 HNRNPUL2Q1KMD3 747 aaKnown RBP30.25■■■□□ 2.43
KCNMA1-252ENST00000639120 TOPBP1Q92547 1522 aa30.21■■■□□ 2.43
KCNMA1-252ENST00000639120 FGD5Q6ZNL6 1462 aa30.17■■■□□ 2.42
KCNMA1-252ENST00000639120 URB2Q14146 1524 aaKnown RBP30.16■■■□□ 2.42
KCNMA1-252ENST00000639120 RUSC2Q8N2Y8 1516 aa30.13■■■□□ 2.41
KCNMA1-252ENST00000639120 UBTFP17480 764 aaKnown RBP30.12■■■□□ 2.41
KCNMA1-252ENST00000639120 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
KCNMA1-252ENST00000639120 CSRNP3Q8WYN3 585 aa30.11■■■□□ 2.41
KCNMA1-252ENST00000639120 MRC2Q9UBG0 1479 aa30.1■■■□□ 2.41
KCNMA1-252ENST00000639120 GOLGA3Q08378 1498 aa30.08■■■□□ 2.41
KCNMA1-252ENST00000639120 POLA1P09884 1462 aaPredicted RBP30.04■■■□□ 2.4
KCNMA1-252ENST00000639120 KIF27Q86VH2 1401 aa30.04■■■□□ 2.4
KCNMA1-252ENST00000639120 CUX2O14529 1486 aa29.97■■■□□ 2.39
KCNMA1-252ENST00000639120 RAD54L2Q9Y4B4 1467 aa29.93■■■□□ 2.38
KCNMA1-252ENST00000639120 WDR62O43379 1518 aa29.9■■■□□ 2.38
KCNMA1-252ENST00000639120 ABCA10Q8WWZ4 1543 aa29.9■■■□□ 2.38
KCNMA1-252ENST00000639120 DHX57Q6P158 1386 aaKnown RBP29.84■■■□□ 2.37
KCNMA1-252ENST00000639120 VPS8Q8N3P4 1428 aa29.82■■■□□ 2.36
KCNMA1-252ENST00000639120 KIF21BO75037 1637 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms