RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 NISCHQ9Y2I1 1504 aa52.94■■■■■ 6.07
SYNGR3-201ENST00000248121 CCDC180Q9P1Z9 1646 aa46.22■■■■■ 4.99
SYNGR3-201ENST00000248121 ZCCHC6Q5VYS8 1495 aaKnown RBP44.47■■■■■ 4.71
SYNGR3-201ENST00000248121 ABCC9O60706 1549 aa43.98■■■■■ 4.63
SYNGR3-201ENST00000248121 DCAF8L2P0C7V8 631 aa43.81■■■■■ 4.6
SYNGR3-201ENST00000248121 DCAF1Q9Y4B6 1507 aa43.66■■■■■ 4.58
SYNGR3-201ENST00000248121 SHROOM4Q9ULL8 1493 aa43.26■■■■■ 4.52
SYNGR3-201ENST00000248121 MYO15BQ96JP2 1530 aa43.15■■■■■ 4.5
SYNGR3-201ENST00000248121 NACADO15069 1562 aa43.02■■■■■ 4.48
SYNGR3-201ENST00000248121 RB1CC1Q8TDY2 1594 aa42.72■■■■■ 4.43
SYNGR3-201ENST00000248121 SCRIBQ14160 1630 aa42.65■■■■■ 4.42
SYNGR3-201ENST00000248121 UNC13AQ9UPW8 1703 aa42.13■■■■■ 4.34
SYNGR3-201ENST00000248121 BICRAQ9NZM4 1560 aa41.6■■■■■ 4.25
SYNGR3-201ENST00000248121 PABPN1Q86U42 306 aaKnown RBP eCLIP41.44■■■■■ 4.22
SYNGR3-201ENST00000248121 SUPT5HO00267 1087 aaKnown RBP41.43■■■■■ 4.22
SYNGR3-201ENST00000248121 CECR2Q9BXF3 1484 aa41.28■■■■■ 4.2
SYNGR3-201ENST00000248121 RSF1Q96T23 1441 aaPredicted RBP41.03■■■■■ 4.16
SYNGR3-201ENST00000248121 MROH2BQ7Z745 1585 aa41■■■■■ 4.15
SYNGR3-201ENST00000248121 BAZ1AQ9NRL2 1556 aaPredicted RBP40.85■■■■■ 4.13
SYNGR3-201ENST00000248121 SMARCA4P51532 1647 aa40.79■■■■■ 4.12
SYNGR3-201ENST00000248121 WIZO95785 1651 aa40.71■■■■■ 4.11
SYNGR3-201ENST00000248121 EIF4G1Q04637 1599 aaKnown RBP40.3■■■■■ 4.04
SYNGR3-201ENST00000248121 PEG3Q9GZU2 1588 aa40.22■■■■■ 4.03
SYNGR3-201ENST00000248121 TOP2AP11388 1531 aaKnown RBP40.14■■■■■ 4.02
SYNGR3-201ENST00000248121 ATAD2BQ9ULI0 1458 aa40.11■■■■■ 4.01
SYNGR3-201ENST00000248121 SMARCA2P51531 1590 aa40.01■■■■■ 4
SYNGR3-201ENST00000248121 BAZ1BQ9UIG0 1483 aaKnown RBP39.86■■■■□ 3.97
SYNGR3-201ENST00000248121 CHIC1Q5VXU3 224 aa39.82■■■■□ 3.96
SYNGR3-201ENST00000248121 CC2D2AQ9P2K1 1620 aa39.78■■■■□ 3.96
SYNGR3-201ENST00000248121 CCDC88BA6NC98 1476 aa39.76■■■■□ 3.95
SYNGR3-201ENST00000248121 NCAPD3P42695 1498 aa39.71■■■■□ 3.95
SYNGR3-201ENST00000248121 HMGXB3Q12766 1538 aa39.68■■■■□ 3.94
SYNGR3-201ENST00000248121 ABCC8Q09428 1581 aa39■■■■□ 3.83
SYNGR3-201ENST00000248121 DNAJC5BQ9UF47 199 aa38.99■■■■□ 3.83
SYNGR3-201ENST00000248121 TRIM41Q8WV44 630 aa38.84■■■■□ 3.81
SYNGR3-201ENST00000248121 CFTRP13569 1480 aa38.83■■■■□ 3.81
SYNGR3-201ENST00000248121 PRDM2Q13029 1718 aa38.73■■■■□ 3.79
SYNGR3-201ENST00000248121 CADPSQ9ULU8 1353 aa38.69■■■■□ 3.78
SYNGR3-201ENST00000248121 NESP48681 1621 aa38.62■■■■□ 3.77
SYNGR3-201ENST00000248121 WRNQ14191 1432 aaPredicted RBP eCLIP38.59■■■■□ 3.77
SYNGR3-201ENST00000248121 SYNJ1O43426 1573 aa38.58■■■■□ 3.77
SYNGR3-201ENST00000248121 LAMC3Q9Y6N6 1575 aa38.42■■■■□ 3.74
SYNGR3-201ENST00000248121 LOC105371045A0A1W2PR82 267 aa38.4■■■■□ 3.74
SYNGR3-201ENST00000248121 TOP2BQ02880 1626 aa38.33■■■■□ 3.73
SYNGR3-201ENST00000248121 FANCD2Q9BXW9 1451 aa38.33■■■■□ 3.73
SYNGR3-201ENST00000248121 CUX1P39880 1505 aa38.33■■■■□ 3.73
SYNGR3-201ENST00000248121 BIVM-ERCC5R4GMW8 1640 aa38.32■■■■□ 3.73
SYNGR3-201ENST00000248121 FAM9AQ8IZU1 332 aaPredicted RBP38.29■■■■□ 3.72
SYNGR3-201ENST00000248121 KIF21AQ7Z4S6 1674 aa38.17■■■■□ 3.7
SYNGR3-201ENST00000248121 SOGA1O94964 1423 aa38.17■■■■□ 3.7
SYNGR3-201ENST00000248121 RUSC2Q8N2Y8 1516 aa38.1■■■■□ 3.69
SYNGR3-201ENST00000248121 CEP164Q9UPV0 1460 aa38.08■■■■□ 3.69
SYNGR3-201ENST00000248121 PDS5BQ9NTI5 1447 aa38.05■■■■□ 3.68
SYNGR3-201ENST00000248121 DNMBPQ6XZF7 1577 aa37.96■■■■□ 3.67
SYNGR3-201ENST00000248121 URB2Q14146 1524 aaKnown RBP37.93■■■■□ 3.66
SYNGR3-201ENST00000248121 TOPBP1Q92547 1522 aa37.92■■■■□ 3.66
SYNGR3-201ENST00000248121 FGD5Q6ZNL6 1462 aa37.91■■■■□ 3.66
SYNGR3-201ENST00000248121 EHMT2Q96KQ7 1210 aa37.88■■■■□ 3.65
SYNGR3-201ENST00000248121 EEA1Q15075 1411 aa37.8■■■■□ 3.64
SYNGR3-201ENST00000248121 POLA1P09884 1462 aaPredicted RBP37.75■■■■□ 3.63
SYNGR3-201ENST00000248121 CSRNP3Q8WYN3 585 aa37.69■■■■□ 3.62
SYNGR3-201ENST00000248121 RAD54L2Q9Y4B4 1467 aa37.67■■■■□ 3.62
SYNGR3-201ENST00000248121 MRC2Q9UBG0 1479 aa37.66■■■■□ 3.62
SYNGR3-201ENST00000248121 ERCC6Q03468 1493 aa37.62■■■■□ 3.61
SYNGR3-201ENST00000248121 CUX2O14529 1486 aa37.6■■■■□ 3.61
SYNGR3-201ENST00000248121 KIF27Q86VH2 1401 aa37.56■■■■□ 3.6
SYNGR3-201ENST00000248121 WDR97A6NE52 1622 aa37.53■■■■□ 3.6
SYNGR3-201ENST00000248121 THOC2Q8NI27 1593 aaKnown RBP37.52■■■■□ 3.6
SYNGR3-201ENST00000248121 WDR62O43379 1518 aa37.51■■■■□ 3.59
SYNGR3-201ENST00000248121 ABCA10Q8WWZ4 1543 aa37.5■■■■□ 3.59
SYNGR3-201ENST00000248121 KIF21BO75037 1637 aa37.48■■■■□ 3.59
SYNGR3-201ENST00000248121 TARBP1Q13395 1621 aaKnown RBP37.42■■■■□ 3.58
SYNGR3-201ENST00000248121 GOLGA3Q08378 1498 aa37.39■■■■□ 3.58
SYNGR3-201ENST00000248121 RAPGEF2Q9Y4G8 1499 aa37.39■■■■□ 3.58
SYNGR3-201ENST00000248121 PRXQ9BXM0 1461 aa37.34■■■■□ 3.57
SYNGR3-201ENST00000248121 IGF1RP08069 1367 aa37.3■■■■□ 3.56
SYNGR3-201ENST00000248121 ABCA5Q8WWZ7 1642 aa37.29■■■■□ 3.56
SYNGR3-201ENST00000248121 TDRD9Q8NDG6 1382 aaKnown RBP37.27■■■■□ 3.56
SYNGR3-201ENST00000248121 UBTFP17480 764 aaKnown RBP37.22■■■■□ 3.55
SYNGR3-201ENST00000248121 ERICH3Q5RHP9 1530 aa37.21■■■■□ 3.55
SYNGR3-201ENST00000248121 TNIKQ9UKE5 1360 aa37.21■■■■□ 3.55
SYNGR3-201ENST00000248121 GAPVD1Q14C86 1478 aa37.15■■■■□ 3.54
SYNGR3-201ENST00000248121 IFT140Q96RY7 1462 aa37.13■■■■□ 3.53
SYNGR3-201ENST00000248121 ZNF608Q9ULD9 1512 aaPredicted RBP37.12■■■■□ 3.53
SYNGR3-201ENST00000248121 CEP162Q5TB80 1403 aa37.1■■■■□ 3.53
SYNGR3-201ENST00000248121 PCGF6Q9BYE7 350 aa37.09■■■■□ 3.53
SYNGR3-201ENST00000248121 CARMIL1Q5VZK9 1371 aa37.09■■■■□ 3.53
SYNGR3-201ENST00000248121 AQRO60306 1485 aaKnown RBP eCLIP37.08■■■■□ 3.53
SYNGR3-201ENST00000248121 PBRM1Q86U86 1689 aa37.08■■■■□ 3.53
SYNGR3-201ENST00000248121 CUL7Q14999 1698 aa37.03■■■■□ 3.52
SYNGR3-201ENST00000248121 EIF4G3O43432 1585 aaKnown RBP36.98■■■■□ 3.51
SYNGR3-201ENST00000248121 TRIM26Q12899 539 aaPredicted RBP36.87■■■■□ 3.49
SYNGR3-201ENST00000248121 RANGAP1P46060 587 aaPredicted RBP36.86■■■■□ 3.49
SYNGR3-201ENST00000248121 GRIN2BQ13224 1484 aa36.85■■■■□ 3.49
SYNGR3-201ENST00000248121 ADAMTS12P58397 1594 aa36.81■■■■□ 3.48
SYNGR3-201ENST00000248121 CLIP1P30622 1438 aa36.81■■■■□ 3.48
SYNGR3-201ENST00000248121 SNAPC4Q5SXM2 1469 aa36.72■■■■□ 3.47
SYNGR3-201ENST00000248121 CTTNBP2Q8WZ74 1663 aa36.71■■■■□ 3.47
SYNGR3-201ENST00000248121 FHAD1B1AJZ9 1412 aa36.69■■■■□ 3.46
SYNGR3-201ENST00000248121 PPARGC1BQ86YN6 1023 aaKnown RBP36.58■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms