RNA–Protein interactions for RNA: ENST00000616254.1

AC244517.3-201, humanhuman

BASIC

Gene AC244517.3, Length 1,235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC244517.3-201ENST00000616254 AEBP2Q6ZN18 517 aaPredicted RBP43.49■■■■■ 4.55
AC244517.3-201ENST00000616254 CHIC1Q5VXU3 224 aa42.7■■■■■ 4.43
AC244517.3-201ENST00000616254 PHF23Q9BUL5 403 aaPredicted RBP37.72■■■■□ 3.63
AC244517.3-201ENST00000616254 SENP3Q9H4L4 574 aaPredicted RBP36.62■■■■□ 3.45
AC244517.3-201ENST00000616254 PLPPR3Q6T4P5 718 aa34.78■■■■□ 3.16
AC244517.3-201ENST00000616254 FOXD1Q16676 465 aa34.09■■■■□ 3.05
AC244517.3-201ENST00000616254 PPP6R1Q9UPN7 881 aa33.19■■■□□ 2.9
AC244517.3-201ENST00000616254 ADRA2BP18089 450 aa33.18■■■□□ 2.9
AC244517.3-201ENST00000616254 PIAS4Q8N2W9 510 aaPredicted RBP32.21■■■□□ 2.75
AC244517.3-201ENST00000616254 MSH5O43196 834 aa31.1■■■□□ 2.57
AC244517.3-201ENST00000616254 PPP4R3CPQ6ZMV5 832 aa30.79■■■□□ 2.52
AC244517.3-201ENST00000616254 KCNA4P22459 653 aa30.6■■■□□ 2.49
AC244517.3-201ENST00000616254 SCAF1Q9H7N4 1312 aaKnown RBP30.07■■■□□ 2.4
AC244517.3-201ENST00000616254 MAPK8IP2Q13387 824 aaPredicted RBP30.03■■■□□ 2.4
AC244517.3-201ENST00000616254 NCBP3Q53F19 620 aaKnown RBP29.94■■■□□ 2.38
AC244517.3-201ENST00000616254 CNKSR2Q8WXI2 1034 aa29.75■■■□□ 2.35
AC244517.3-201ENST00000616254 NPM3O75607 178 aaKnown RBP29.68■■■□□ 2.34
AC244517.3-201ENST00000616254 DMRT2Q9Y5R5 561 aa29.34■■■□□ 2.29
AC244517.3-201ENST00000616254 SLC4A1APQ9BWU0 796 aaKnown RBP29.12■■■□□ 2.25
AC244517.3-201ENST00000616254 RNF216Q9NWF9 866 aaPredicted RBP29.07■■■□□ 2.24
AC244517.3-201ENST00000616254 EHMT2Q96KQ7 1210 aa28.88■■■□□ 2.21
AC244517.3-201ENST00000616254 HOXD11P31277 338 aaPredicted RBP28.87■■■□□ 2.21
AC244517.3-201ENST00000616254 DNAJC5BQ9UF47 199 aa28.53■■■□□ 2.16
AC244517.3-201ENST00000616254 CSRNP3Q8WYN3 585 aa28.31■■■□□ 2.12
AC244517.3-201ENST00000616254 ZBTB22O15209 634 aa28.22■■■□□ 2.11
AC244517.3-201ENST00000616254 DCAF8L1A6NGE4 600 aa28.15■■■□□ 2.1
AC244517.3-201ENST00000616254 SLC4A2P04920 1241 aa27.97■■■□□ 2.07
AC244517.3-201ENST00000616254 FOXD4L1Q9NU39 408 aa27.93■■■□□ 2.06
AC244517.3-201ENST00000616254 POTEDQ86YR6 584 aa27.8■■■□□ 2.04
AC244517.3-201ENST00000616254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.55■■■□□ 2
AC244517.3-201ENST00000616254 MYCNP04198 464 aaPredicted RBP27.31■■□□□ 1.96
AC244517.3-201ENST00000616254 U3KPZ7 1027 aaPredicted RBP27.21■■□□□ 1.95
AC244517.3-201ENST00000616254 ATXN8OSP0DMR3 200 aa26.8■■□□□ 1.88
AC244517.3-201ENST00000616254 RNF39Q9H2S5 420 aa26.78■■□□□ 1.88
AC244517.3-201ENST00000616254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.76■■□□□ 1.87
AC244517.3-201ENST00000616254 HNRNPUL2Q1KMD3 747 aaKnown RBP26.76■■□□□ 1.87
AC244517.3-201ENST00000616254 ATF5Q9Y2D1 282 aaPredicted RBP26.76■■□□□ 1.87
AC244517.3-201ENST00000616254 SAMD1Q6SPF0 538 aaPredicted RBP26.75■■□□□ 1.87
AC244517.3-201ENST00000616254 SPINK5Q9NQ38 1064 aaPredicted RBP26.4■■□□□ 1.82
AC244517.3-201ENST00000616254 C1QBPQ07021 282 aaKnown RBP26.39■■□□□ 1.82
AC244517.3-201ENST00000616254 APLP2Q06481 763 aa26.34■■□□□ 1.81
AC244517.3-201ENST00000616254 TRHP20396 242 aaPredicted RBP26.2■■□□□ 1.78
AC244517.3-201ENST00000616254 CAPN15O75808 1086 aa26.19■■□□□ 1.78
AC244517.3-201ENST00000616254 ZNF219Q9P2Y4 722 aaPredicted RBP26.17■■□□□ 1.78
AC244517.3-201ENST00000616254 POLA2Q14181 598 aa25.83■■□□□ 1.73
AC244517.3-201ENST00000616254 ABCB7O75027 752 aa25.82■■□□□ 1.72
AC244517.3-201ENST00000616254 CACNB1Q02641 598 aaPredicted RBP25.82■■□□□ 1.72
AC244517.3-201ENST00000616254 DSG3P32926 999 aa25.66■■□□□ 1.7
AC244517.3-201ENST00000616254 MKRN4PQ13434 485 aaPredicted RBP25.58■■□□□ 1.69
AC244517.3-201ENST00000616254 FKBP8Q14318 412 aa25.56■■□□□ 1.68
AC244517.3-201ENST00000616254 FBLN2P98095 1184 aa25.38■■□□□ 1.65
AC244517.3-201ENST00000616254 ZBTB12Q9Y330 459 aaPredicted RBP25.23■■□□□ 1.63
AC244517.3-201ENST00000616254 SPDYE4A6NLX3 237 aa25.1■■□□□ 1.61
AC244517.3-201ENST00000616254 OSCARQ8IYS5 282 aa24.98■■□□□ 1.59
AC244517.3-201ENST00000616254 ZNF692Q9BU19 519 aaPredicted RBP24.7■■□□□ 1.54
AC244517.3-201ENST00000616254 PROM2Q8N271 834 aa24.69■■□□□ 1.54
AC244517.3-201ENST00000616254 SPDYE2BA6NHP3 402 aa24.67■■□□□ 1.54
AC244517.3-201ENST00000616254 SPDYE6P0CI01 402 aa24.67■■□□□ 1.54
AC244517.3-201ENST00000616254 SPDYE2Q495Y8 402 aa24.67■■□□□ 1.54
AC244517.3-201ENST00000616254 SSUH2Q9Y2M2 353 aa24.57■■□□□ 1.52
AC244517.3-201ENST00000616254 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.5
AC244517.3-201ENST00000616254 FBXO3Q9UK99 471 aa24.34■■□□□ 1.49
AC244517.3-201ENST00000616254 RBM42Q9BTD8 480 aaKnown RBP24.27■■□□□ 1.48
AC244517.3-201ENST00000616254 VASPP50552 380 aaPredicted RBP24.15■■□□□ 1.46
AC244517.3-201ENST00000616254 AKT1S1Q96B36 256 aa24.12■■□□□ 1.45
AC244517.3-201ENST00000616254 REM2Q8IYK8 340 aaPredicted RBP23.98■■□□□ 1.43
AC244517.3-201ENST00000616254 RTN4Q9NQC3 1192 aaKnown RBP23.98■■□□□ 1.43
AC244517.3-201ENST00000616254 STAG3Q9UJ98 1225 aa23.93■■□□□ 1.42
AC244517.3-201ENST00000616254 IFNLR1Q8IU57 520 aaPredicted RBP23.9■■□□□ 1.42
AC244517.3-201ENST00000616254 SPDYE1Q8NFV5 336 aaPredicted RBP23.85■■□□□ 1.41
AC244517.3-201ENST00000616254 CLEC11AQ9Y240 323 aa23.85■■□□□ 1.41
AC244517.3-201ENST00000616254 AMER1Q5JTC6 1135 aaPredicted RBP23.83■■□□□ 1.41
AC244517.3-201ENST00000616254 MIER1Q8N108 512 aa23.75■■□□□ 1.39
AC244517.3-201ENST00000616254 PLCD3Q8N3E9 789 aa23.75■■□□□ 1.39
AC244517.3-201ENST00000616254 PITPNM1O00562 1244 aa23.73■■□□□ 1.39
AC244517.3-201ENST00000616254 KLHL34Q8N239 644 aa23.64■■□□□ 1.37
AC244517.3-201ENST00000616254 PRR29P0C7W0 189 aa23.61■■□□□ 1.37
AC244517.3-201ENST00000616254 CREBZFQ9NS37 354 aa23.47■■□□□ 1.35
AC244517.3-201ENST00000616254 SPOCK2Q92563 424 aa23.46■■□□□ 1.35
AC244517.3-201ENST00000616254 PLEKHG5O94827 1062 aa23.44■■□□□ 1.34
AC244517.3-201ENST00000616254 CHADLQ6NUI6 762 aa23.31■■□□□ 1.32
AC244517.3-201ENST00000616254 ZBTB47Q9UFB7 747 aaPredicted RBP23.3■■□□□ 1.32
AC244517.3-201ENST00000616254 MNX1P50219 401 aaPredicted RBP23.28■■□□□ 1.32
AC244517.3-201ENST00000616254 PKD2Q13563 968 aa23.26■■□□□ 1.31
AC244517.3-201ENST00000616254 CHRDL2Q6WN34 429 aa23.23■■□□□ 1.31
AC244517.3-201ENST00000616254 FXR2P51116 673 aaKnown RBP eCLIP23.14■■□□□ 1.29
AC244517.3-201ENST00000616254 NUBP1P53384 320 aa23.13■■□□□ 1.29
AC244517.3-201ENST00000616254 PRKAR2AP13861 404 aaKnown RBP23.12■■□□□ 1.29
AC244517.3-201ENST00000616254 CIZ1Q9ULV3 898 aaPredicted RBP23.1■■□□□ 1.29
AC244517.3-201ENST00000616254 PIP4P2Q8N4L2 257 aa23.07■■□□□ 1.28
AC244517.3-201ENST00000616254 RASEFQ8IZ41 740 aa23■■□□□ 1.27
AC244517.3-201ENST00000616254 FARP1Q9Y4F1 1045 aaPredicted RBP23■■□□□ 1.27
AC244517.3-201ENST00000616254 ECM2O94769 699 aaPredicted RBP22.99■■□□□ 1.27
AC244517.3-201ENST00000616254 NPM1P06748 294 aaKnown RBP eCLIP22.94■■□□□ 1.26
AC244517.3-201ENST00000616254 DCAF8Q5TAQ9 597 aa22.93■■□□□ 1.26
AC244517.3-201ENST00000616254 DCAF8L2P0C7V8 631 aa22.86■■□□□ 1.25
AC244517.3-201ENST00000616254 GSE1Q14687 1217 aa22.85■■□□□ 1.25
AC244517.3-201ENST00000616254 FAM212AQ96EL1 285 aa22.85■■□□□ 1.25
AC244517.3-201ENST00000616254 RGL2O15211 777 aa22.83■■□□□ 1.25
AC244517.3-201ENST00000616254 TSPYL2Q9H2G4 693 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms