Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 RN7SL375P-201ENST00000492442 298 ntBASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 C2orf69P1-201ENST00000563532 1093 ntBASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 MIR4265-201ENST00000582152 99 ntBASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 AL031673.1-201ENST00000611460 466 ntBASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 AC011471.3-201ENST00000623576 402 ntBASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 AC068760.1-201ENST00000493579 1953 ntBASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
SHROOM1Q2M3G4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 AC092573.1-201ENST00000433054 884 ntBASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 GRPEL2P1-201ENST00000453145 339 ntBASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 TREHP1-201ENST00000531328 465 ntBASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms