RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 NISCHQ9Y2I1 1504 aa33.33■■■□□ 2.93
CMTM1-217ENST00000533666 CCDC180Q9P1Z9 1646 aa29.51■■■□□ 2.31
CMTM1-217ENST00000533666 ABCC9O60706 1549 aa28.48■■■□□ 2.15
CMTM1-217ENST00000533666 ZCCHC6Q5VYS8 1495 aaKnown RBP27.83■■■□□ 2.04
CMTM1-217ENST00000533666 DCAF8L2P0C7V8 631 aa27.78■■■□□ 2.04
CMTM1-217ENST00000533666 NACADO15069 1562 aa27.68■■■□□ 2.02
CMTM1-217ENST00000533666 MYO15BQ96JP2 1530 aa27.63■■■□□ 2.01
CMTM1-217ENST00000533666 DCAF1Q9Y4B6 1507 aa27.63■■■□□ 2.01
CMTM1-217ENST00000533666 RB1CC1Q8TDY2 1594 aa27.63■■■□□ 2.01
CMTM1-217ENST00000533666 SCRIBQ14160 1630 aa26.9■■□□□ 1.9
CMTM1-217ENST00000533666 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
CMTM1-217ENST00000533666 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
CMTM1-217ENST00000533666 BICRAQ9NZM4 1560 aa26.65■■□□□ 1.86
CMTM1-217ENST00000533666 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
CMTM1-217ENST00000533666 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
CMTM1-217ENST00000533666 CECR2Q9BXF3 1484 aa25.86■■□□□ 1.73
CMTM1-217ENST00000533666 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
CMTM1-217ENST00000533666 SMARCA4P51532 1647 aa25.78■■□□□ 1.72
CMTM1-217ENST00000533666 CC2D2AQ9P2K1 1620 aa25.78■■□□□ 1.72
CMTM1-217ENST00000533666 DNAJC5BQ9UF47 199 aa25.73■■□□□ 1.71
CMTM1-217ENST00000533666 MROH2BQ7Z745 1585 aa25.65■■□□□ 1.7
CMTM1-217ENST00000533666 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
CMTM1-217ENST00000533666 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
CMTM1-217ENST00000533666 PEG3Q9GZU2 1588 aa25.53■■□□□ 1.68
CMTM1-217ENST00000533666 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
CMTM1-217ENST00000533666 NCAPD3P42695 1498 aa25.51■■□□□ 1.67
CMTM1-217ENST00000533666 HMGXB3Q12766 1538 aa25.42■■□□□ 1.66
CMTM1-217ENST00000533666 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
CMTM1-217ENST00000533666 WIZO95785 1651 aa25.39■■□□□ 1.66
CMTM1-217ENST00000533666 SUPT5HO00267 1087 aaKnown RBP25.2■■□□□ 1.62
CMTM1-217ENST00000533666 TOP2AP11388 1531 aaKnown RBP25.2■■□□□ 1.62
CMTM1-217ENST00000533666 CCDC88BA6NC98 1476 aa24.88■■□□□ 1.57
CMTM1-217ENST00000533666 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
CMTM1-217ENST00000533666 LAMC3Q9Y6N6 1575 aa24.8■■□□□ 1.56
CMTM1-217ENST00000533666 NESP48681 1621 aa24.71■■□□□ 1.55
CMTM1-217ENST00000533666 CFTRP13569 1480 aa24.7■■□□□ 1.55
CMTM1-217ENST00000533666 PDS5BQ9NTI5 1447 aa24.67■■□□□ 1.54
CMTM1-217ENST00000533666 ERCC6Q03468 1493 aa24.61■■□□□ 1.53
CMTM1-217ENST00000533666 PRDM2Q13029 1718 aa24.57■■□□□ 1.52
CMTM1-217ENST00000533666 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
CMTM1-217ENST00000533666 CEP164Q9UPV0 1460 aa24.46■■□□□ 1.51
CMTM1-217ENST00000533666 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
CMTM1-217ENST00000533666 MRC2Q9UBG0 1479 aa24.34■■□□□ 1.49
CMTM1-217ENST00000533666 THOC2Q8NI27 1593 aaKnown RBP24.27■■□□□ 1.48
CMTM1-217ENST00000533666 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
CMTM1-217ENST00000533666 WDR62O43379 1518 aa24.21■■□□□ 1.47
CMTM1-217ENST00000533666 CUX2O14529 1486 aa24.19■■□□□ 1.46
CMTM1-217ENST00000533666 URB2Q14146 1524 aaKnown RBP24.18■■□□□ 1.46
CMTM1-217ENST00000533666 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
CMTM1-217ENST00000533666 TOPBP1Q92547 1522 aa24.13■■□□□ 1.45
CMTM1-217ENST00000533666 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
CMTM1-217ENST00000533666 CUX1P39880 1505 aa24.05■■□□□ 1.44
CMTM1-217ENST00000533666 TOP2BQ02880 1626 aa23.99■■□□□ 1.43
CMTM1-217ENST00000533666 BIVM-ERCC5R4GMW8 1640 aa23.96■■□□□ 1.43
CMTM1-217ENST00000533666 SYNJ1O43426 1573 aa23.95■■□□□ 1.42
CMTM1-217ENST00000533666 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
CMTM1-217ENST00000533666 FGD5Q6ZNL6 1462 aa23.94■■□□□ 1.42
CMTM1-217ENST00000533666 IFT140Q96RY7 1462 aa23.94■■□□□ 1.42
CMTM1-217ENST00000533666 SOGA1O94964 1423 aa23.9■■□□□ 1.42
CMTM1-217ENST00000533666 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
CMTM1-217ENST00000533666 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
CMTM1-217ENST00000533666 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
CMTM1-217ENST00000533666 ABCA10Q8WWZ4 1543 aa23.75■■□□□ 1.39
CMTM1-217ENST00000533666 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
CMTM1-217ENST00000533666 ZNF608Q9ULD9 1512 aaPredicted RBP23.71■■□□□ 1.39
CMTM1-217ENST00000533666 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
CMTM1-217ENST00000533666 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
CMTM1-217ENST00000533666 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
CMTM1-217ENST00000533666 AQRO60306 1485 aaKnown RBP eCLIP23.66■■□□□ 1.38
CMTM1-217ENST00000533666 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
CMTM1-217ENST00000533666 KIF27Q86VH2 1401 aa23.61■■□□□ 1.37
CMTM1-217ENST00000533666 GRIN2BQ13224 1484 aa23.59■■□□□ 1.37
CMTM1-217ENST00000533666 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
CMTM1-217ENST00000533666 PBRM1Q86U86 1689 aa23.52■■□□□ 1.36
CMTM1-217ENST00000533666 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
CMTM1-217ENST00000533666 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
CMTM1-217ENST00000533666 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
CMTM1-217ENST00000533666 EEA1Q15075 1411 aa23.43■■□□□ 1.34
CMTM1-217ENST00000533666 IGF1RP08069 1367 aa23.4■■□□□ 1.34
CMTM1-217ENST00000533666 CHMP7Q8WUX9 453 aaPredicted RBP23.4■■□□□ 1.34
CMTM1-217ENST00000533666 FBLN2P98095 1184 aa23.39■■□□□ 1.33
CMTM1-217ENST00000533666 SYNJ2O15056 1496 aa23.38■■□□□ 1.33
CMTM1-217ENST00000533666 FHAD1B1AJZ9 1412 aa23.38■■□□□ 1.33
CMTM1-217ENST00000533666 CUL7Q14999 1698 aa23.37■■□□□ 1.33
CMTM1-217ENST00000533666 RUSC2Q8N2Y8 1516 aa23.35■■□□□ 1.33
CMTM1-217ENST00000533666 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
CMTM1-217ENST00000533666 CARMIL1Q5VZK9 1371 aa23.31■■□□□ 1.32
CMTM1-217ENST00000533666 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
CMTM1-217ENST00000533666 CSRNP3Q8WYN3 585 aa23.3■■□□□ 1.32
CMTM1-217ENST00000533666 CHD1O14646 1710 aa23.3■■□□□ 1.32
CMTM1-217ENST00000533666 FAM9AQ8IZU1 332 aaPredicted RBP23.26■■□□□ 1.31
CMTM1-217ENST00000533666 GRIN2AQ12879 1464 aa23.25■■□□□ 1.31
CMTM1-217ENST00000533666 RAPGEF2Q9Y4G8 1499 aa23.22■■□□□ 1.31
CMTM1-217ENST00000533666 PRXQ9BXM0 1461 aa23.17■■□□□ 1.3
CMTM1-217ENST00000533666 NUP160Q12769 1436 aa23.12■■□□□ 1.29
CMTM1-217ENST00000533666 DNAJC5Q9H3Z4 198 aa23.08■■□□□ 1.29
CMTM1-217ENST00000533666 KIF21BO75037 1637 aa23.08■■□□□ 1.28
CMTM1-217ENST00000533666 CEP170Q5SW79 1584 aa23.07■■□□□ 1.28
CMTM1-217ENST00000533666 CLASP1Q7Z460 1538 aa23.04■■□□□ 1.28
CMTM1-217ENST00000533666 KIAA0586Q9BVV6 1533 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms