RNA–Protein interactions for RNA: ENST00000574838.1

TXNDC17-208, Transcript of thioredoxin domain containing 17, humanhuman

TSL 3 BASIC

Gene TXNDC17, Length 746 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNDC17-208ENST00000574838 NISCHQ9Y2I1 1504 aa33.88■■■■□ 3.01
TXNDC17-208ENST00000574838 CCDC180Q9P1Z9 1646 aa30.22■■■□□ 2.43
TXNDC17-208ENST00000574838 ABCC9O60706 1549 aa29.83■■■□□ 2.37
TXNDC17-208ENST00000574838 RB1CC1Q8TDY2 1594 aa28.63■■■□□ 2.17
TXNDC17-208ENST00000574838 NACADO15069 1562 aa28.56■■■□□ 2.16
TXNDC17-208ENST00000574838 DCAF8L2P0C7V8 631 aa28.41■■■□□ 2.14
TXNDC17-208ENST00000574838 MYO15BQ96JP2 1530 aa28.37■■■□□ 2.13
TXNDC17-208ENST00000574838 ZCCHC6Q5VYS8 1495 aaKnown RBP28.14■■■□□ 2.09
TXNDC17-208ENST00000574838 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
TXNDC17-208ENST00000574838 DNAJC5BQ9UF47 199 aa27.98■■■□□ 2.07
TXNDC17-208ENST00000574838 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
TXNDC17-208ENST00000574838 UNC13AQ9UPW8 1703 aa27.81■■■□□ 2.04
TXNDC17-208ENST00000574838 BICRAQ9NZM4 1560 aa27.7■■■□□ 2.03
TXNDC17-208ENST00000574838 SHROOM4Q9ULL8 1493 aa27.57■■■□□ 2
TXNDC17-208ENST00000574838 SCRIBQ14160 1630 aa27.46■■□□□ 1.99
TXNDC17-208ENST00000574838 EIF4G1Q04637 1599 aaKnown RBP27.04■■□□□ 1.92
TXNDC17-208ENST00000574838 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
TXNDC17-208ENST00000574838 CECR2Q9BXF3 1484 aa26.9■■□□□ 1.9
TXNDC17-208ENST00000574838 NCAPD3P42695 1498 aa26.38■■□□□ 1.81
TXNDC17-208ENST00000574838 SMARCA4P51532 1647 aa26.3■■□□□ 1.8
TXNDC17-208ENST00000574838 ATAD2BQ9ULI0 1458 aa26.3■■□□□ 1.8
TXNDC17-208ENST00000574838 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
TXNDC17-208ENST00000574838 SMARCA2P51531 1590 aa26.27■■□□□ 1.8
TXNDC17-208ENST00000574838 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
TXNDC17-208ENST00000574838 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
TXNDC17-208ENST00000574838 DNAJC5Q9H3Z4 198 aa26.08■■□□□ 1.77
TXNDC17-208ENST00000574838 BAZ1BQ9UIG0 1483 aaKnown RBP26.05■■□□□ 1.76
TXNDC17-208ENST00000574838 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
TXNDC17-208ENST00000574838 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
TXNDC17-208ENST00000574838 CUX2O14529 1486 aa25.7■■□□□ 1.7
TXNDC17-208ENST00000574838 NESP48681 1621 aa25.7■■□□□ 1.7
TXNDC17-208ENST00000574838 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
TXNDC17-208ENST00000574838 WIZO95785 1651 aa25.69■■□□□ 1.7
TXNDC17-208ENST00000574838 RSF1Q96T23 1441 aaPredicted RBP25.69■■□□□ 1.7
TXNDC17-208ENST00000574838 PDS5BQ9NTI5 1447 aa25.6■■□□□ 1.69
TXNDC17-208ENST00000574838 CADPSQ9ULU8 1353 aa25.59■■□□□ 1.69
TXNDC17-208ENST00000574838 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
TXNDC17-208ENST00000574838 THOC2Q8NI27 1593 aaKnown RBP25.39■■□□□ 1.65
TXNDC17-208ENST00000574838 CFTRP13569 1480 aa25.36■■□□□ 1.65
TXNDC17-208ENST00000574838 KIF21AQ7Z4S6 1674 aa25.34■■□□□ 1.65
TXNDC17-208ENST00000574838 MRC2Q9UBG0 1479 aa25.28■■□□□ 1.64
TXNDC17-208ENST00000574838 CEP164Q9UPV0 1460 aa25.25■■□□□ 1.63
TXNDC17-208ENST00000574838 FANCD2Q9BXW9 1451 aa25.24■■□□□ 1.63
TXNDC17-208ENST00000574838 CCDC88BA6NC98 1476 aa25.2■■□□□ 1.62
TXNDC17-208ENST00000574838 WDR62O43379 1518 aa25.19■■□□□ 1.62
TXNDC17-208ENST00000574838 PRDM2Q13029 1718 aa25■■□□□ 1.59
TXNDC17-208ENST00000574838 URB2Q14146 1524 aaKnown RBP24.96■■□□□ 1.59
TXNDC17-208ENST00000574838 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
TXNDC17-208ENST00000574838 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.57
TXNDC17-208ENST00000574838 TRIM41Q8WV44 630 aa24.82■■□□□ 1.56
TXNDC17-208ENST00000574838 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
TXNDC17-208ENST00000574838 IFT140Q96RY7 1462 aa24.76■■□□□ 1.55
TXNDC17-208ENST00000574838 DNMBPQ6XZF7 1577 aa24.73■■□□□ 1.55
TXNDC17-208ENST00000574838 OSCARQ8IYS5 282 aa24.61■■□□□ 1.53
TXNDC17-208ENST00000574838 ZNF608Q9ULD9 1512 aaPredicted RBP24.58■■□□□ 1.53
TXNDC17-208ENST00000574838 POLA1P09884 1462 aaPredicted RBP24.56■■□□□ 1.52
TXNDC17-208ENST00000574838 TARBP1Q13395 1621 aaKnown RBP24.51■■□□□ 1.51
TXNDC17-208ENST00000574838 SOGA1O94964 1423 aa24.5■■□□□ 1.51
TXNDC17-208ENST00000574838 EIF4G3O43432 1585 aaKnown RBP24.46■■□□□ 1.51
TXNDC17-208ENST00000574838 CUX1P39880 1505 aa24.45■■□□□ 1.51
TXNDC17-208ENST00000574838 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.5
TXNDC17-208ENST00000574838 FGD5Q6ZNL6 1462 aa24.44■■□□□ 1.5
TXNDC17-208ENST00000574838 RAD54L2Q9Y4B4 1467 aa24.42■■□□□ 1.5
TXNDC17-208ENST00000574838 WDR97A6NE52 1622 aa24.41■■□□□ 1.5
TXNDC17-208ENST00000574838 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
TXNDC17-208ENST00000574838 WRNQ14191 1432 aaPredicted RBP eCLIP24.25■■□□□ 1.47
TXNDC17-208ENST00000574838 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
TXNDC17-208ENST00000574838 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
TXNDC17-208ENST00000574838 FBLN2P98095 1184 aa24.23■■□□□ 1.47
TXNDC17-208ENST00000574838 MAGI1Q96QZ7 1491 aaPredicted RBP24.23■■□□□ 1.47
TXNDC17-208ENST00000574838 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
TXNDC17-208ENST00000574838 SNAPC4Q5SXM2 1469 aa24.19■■□□□ 1.46
TXNDC17-208ENST00000574838 TOP2BQ02880 1626 aa24.19■■□□□ 1.46
TXNDC17-208ENST00000574838 CHMP7Q8WUX9 453 aaPredicted RBP24.18■■□□□ 1.46
TXNDC17-208ENST00000574838 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
TXNDC17-208ENST00000574838 CHD1O14646 1710 aa24.15■■□□□ 1.46
TXNDC17-208ENST00000574838 SYNJ2O15056 1496 aa24.13■■□□□ 1.45
TXNDC17-208ENST00000574838 ARHGEF11O15085 1522 aa24.1■■□□□ 1.45
TXNDC17-208ENST00000574838 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
TXNDC17-208ENST00000574838 SYNJ1O43426 1573 aa24.09■■□□□ 1.45
TXNDC17-208ENST00000574838 RIMBP3CA6NJZ7 1639 aa24.09■■□□□ 1.45
TXNDC17-208ENST00000574838 RIMBP3BA6NNM3 1639 aa24.09■■□□□ 1.45
TXNDC17-208ENST00000574838 RIMBP3Q9UFD9 1639 aa24.09■■□□□ 1.45
TXNDC17-208ENST00000574838 PBRM1Q86U86 1689 aa24.03■■□□□ 1.44
TXNDC17-208ENST00000574838 CLASP1Q7Z460 1538 aa23.98■■□□□ 1.43
TXNDC17-208ENST00000574838 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.43
TXNDC17-208ENST00000574838 CYB5RLQ6IPT4 315 aa23.94■■□□□ 1.42
TXNDC17-208ENST00000574838 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
TXNDC17-208ENST00000574838 GRIN2AQ12879 1464 aa23.91■■□□□ 1.42
TXNDC17-208ENST00000574838 ADAMTS12P58397 1594 aa23.88■■□□□ 1.41
TXNDC17-208ENST00000574838 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
TXNDC17-208ENST00000574838 NUP160Q12769 1436 aa23.84■■□□□ 1.41
TXNDC17-208ENST00000574838 KIF27Q86VH2 1401 aa23.8■■□□□ 1.4
TXNDC17-208ENST00000574838 TRHP20396 242 aaPredicted RBP23.77■■□□□ 1.4
TXNDC17-208ENST00000574838 IGF1RP08069 1367 aa23.74■■□□□ 1.39
TXNDC17-208ENST00000574838 CEP170Q5SW79 1584 aa23.74■■□□□ 1.39
TXNDC17-208ENST00000574838 SHROOM2Q13796 1616 aa23.64■■□□□ 1.38
TXNDC17-208ENST00000574838 JPH4Q96JJ6 628 aa23.63■■□□□ 1.37
TXNDC17-208ENST00000574838 CUL7Q14999 1698 aa23.63■■□□□ 1.37
TXNDC17-208ENST00000574838 CARMIL1Q5VZK9 1371 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms