Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.82■□□□□ 0.28
CACNB3P54284 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNB3P54284 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNB3P54284 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.82■□□□□ 0.28
CACNB3P54284 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNB3P54284 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CACNB3P54284 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.82■□□□□ 0.28
CACNB3P54284 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.82■□□□□ 0.28
CACNB3P54284 RN7SL494P-201ENST00000461517 304 ntBASIC16.82■□□□□ 0.28
CACNB3P54284 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CACNB3P54284 DNM1P51-201ENST00000558149 522 ntBASIC16.82■□□□□ 0.28
CACNB3P54284 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNB3P54284 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CACNB3P54284 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC16.82■□□□□ 0.28
CACNB3P54284 SNORD3B-1-201ENST00000577988 758 ntBASIC16.82■□□□□ 0.28
CACNB3P54284 AC055811.3-201ENST00000584952 686 ntBASIC16.82■□□□□ 0.28
CACNB3P54284 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CACNB3P54284 AL359091.4-201ENST00000610052 409 ntBASIC16.82■□□□□ 0.28
CACNB3P54284 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.82■□□□□ 0.28
CACNB3P54284 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CACNB3P54284 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
CACNB3P54284 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNB3P54284 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNB3P54284 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNB3P54284 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNB3P54284 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CACNB3P54284 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.82■□□□□ 0.28
CACNB3P54284 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNB3P54284 AC113367.3-201ENST00000508316 1912 ntBASIC16.82■□□□□ 0.28
CACNB3P54284 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CACNB3P54284 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.81■□□□□ 0.28
CACNB3P54284 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNB3P54284 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.81■□□□□ 0.28
CACNB3P54284 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CACNB3P54284 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.81■□□□□ 0.28
CACNB3P54284 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 AC234644.1-201ENST00000406065 370 ntBASIC16.81■□□□□ 0.28
CACNB3P54284 LINC00265-2P-201ENST00000413372 782 ntBASIC16.81■□□□□ 0.28
CACNB3P54284 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNB3P54284 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNB3P54284 AL139008.1-201ENST00000437894 228 ntBASIC16.81■□□□□ 0.28
CACNB3P54284 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CACNB3P54284 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC16.81■□□□□ 0.28
CACNB3P54284 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
CACNB3P54284 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNB3P54284 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CACNB3P54284 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.81■□□□□ 0.28
CACNB3P54284 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.81■□□□□ 0.28
CACNB3P54284 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CACNB3P54284 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CACNB3P54284 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 AL672207.1-201ENST00000328462 1570 ntBASIC16.81■□□□□ 0.28
CACNB3P54284 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CACNB3P54284 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNB3P54284 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNB3P54284 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNB3P54284 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CACNB3P54284 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CACNB3P54284 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.8■□□□□ 0.28
CACNB3P54284 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNB3P54284 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.8■□□□□ 0.28
CACNB3P54284 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.8■□□□□ 0.28
CACNB3P54284 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNB3P54284 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC16.8■□□□□ 0.28
CACNB3P54284 AC013553.1-201ENST00000560906 267 ntBASIC16.8■□□□□ 0.28
CACNB3P54284 HMGB1P24-201ENST00000611897 328 ntBASIC16.8■□□□□ 0.28
CACNB3P54284 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNB3P54284 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CACNB3P54284 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CACNB3P54284 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.8■□□□□ 0.28
CACNB3P54284 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CACNB3P54284 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.8■□□□□ 0.28
CACNB3P54284 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms