RNA–Protein interactions for RNA: ENST00000543736.5

FANCA-205, Transcript of FA complementation group A, humanhuman

TSL 1 (best) BASIC

Gene FANCA, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-205ENST00000543736 NISCHQ9Y2I1 1504 aa34.35■■■■□ 3.09
FANCA-205ENST00000543736 ABCC9O60706 1549 aa32.61■■■□□ 2.81
FANCA-205ENST00000543736 DNAJC5BQ9UF47 199 aa31.7■■■□□ 2.67
FANCA-205ENST00000543736 CCDC180Q9P1Z9 1646 aa31.41■■■□□ 2.62
FANCA-205ENST00000543736 RB1CC1Q8TDY2 1594 aa30.46■■■□□ 2.47
FANCA-205ENST00000543736 PABPN1Q86U42 306 aaKnown RBP eCLIP30.11■■■□□ 2.412e-8■□□□□ 10
FANCA-205ENST00000543736 DNAJC5Q9H3Z4 198 aa29.99■■■□□ 2.39
FANCA-205ENST00000543736 NACADO15069 1562 aa29.95■■■□□ 2.39
FANCA-205ENST00000543736 UNC13AQ9UPW8 1703 aa29.86■■■□□ 2.37
FANCA-205ENST00000543736 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
FANCA-205ENST00000543736 CECR2Q9BXF3 1484 aa29.5■■■□□ 2.31
FANCA-205ENST00000543736 CC2D2AQ9P2K1 1620 aa29.41■■■□□ 2.3
FANCA-205ENST00000543736 DCAF8L2P0C7V8 631 aa29.4■■■□□ 2.3
FANCA-205ENST00000543736 MYO15BQ96JP2 1530 aa29.13■■■□□ 2.25
FANCA-205ENST00000543736 SHROOM4Q9ULL8 1493 aa29.11■■■□□ 2.25
FANCA-205ENST00000543736 EIF4G1Q04637 1599 aaKnown RBP29.05■■■□□ 2.24
FANCA-205ENST00000543736 CUX2O14529 1486 aa28.61■■■□□ 2.17
FANCA-205ENST00000543736 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
FANCA-205ENST00000543736 DCAF1Q9Y4B6 1507 aa28.29■■■□□ 2.12
FANCA-205ENST00000543736 ZCCHC6Q5VYS8 1495 aaKnown RBP28.23■■■□□ 2.11
FANCA-205ENST00000543736 ERCC6Q03468 1493 aa28.21■■■□□ 2.11
FANCA-205ENST00000543736 TRIM41Q8WV44 630 aa28.13■■■□□ 2.09
FANCA-205ENST00000543736 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
FANCA-205ENST00000543736 NESP48681 1621 aa27.67■■■□□ 2.02
FANCA-205ENST00000543736 NCAPD3P42695 1498 aa27.66■■■□□ 2.02
FANCA-205ENST00000543736 ATAD2BQ9ULI0 1458 aa27.41■■□□□ 1.98
FANCA-205ENST00000543736 SMARCA2P51531 1590 aa27.39■■□□□ 1.98
FANCA-205ENST00000543736 HMGXB3Q12766 1538 aa27.37■■□□□ 1.97
FANCA-205ENST00000543736 KIF21AQ7Z4S6 1674 aa27.3■■□□□ 1.96
FANCA-205ENST00000543736 LAMC3Q9Y6N6 1575 aa27.25■■□□□ 1.95
FANCA-205ENST00000543736 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
FANCA-205ENST00000543736 SMARCA4P51532 1647 aa27.09■■□□□ 1.93
FANCA-205ENST00000543736 PDS5BQ9NTI5 1447 aa27.09■■□□□ 1.93
FANCA-205ENST00000543736 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
FANCA-205ENST00000543736 OSCARQ8IYS5 282 aa27.01■■□□□ 1.91
FANCA-205ENST00000543736 WDR62O43379 1518 aa26.99■■□□□ 1.91
FANCA-205ENST00000543736 MRC2Q9UBG0 1479 aa26.98■■□□□ 1.91
FANCA-205ENST00000543736 RIMBP3CA6NJZ7 1639 aa26.92■■□□□ 1.9
FANCA-205ENST00000543736 RIMBP3BA6NNM3 1639 aa26.92■■□□□ 1.9
FANCA-205ENST00000543736 RIMBP3Q9UFD9 1639 aa26.92■■□□□ 1.9
FANCA-205ENST00000543736 PEG3Q9GZU2 1588 aa26.84■■□□□ 1.89
FANCA-205ENST00000543736 CADPSQ9ULU8 1353 aa26.73■■□□□ 1.87
FANCA-205ENST00000543736 AEBP2Q6ZN18 517 aaPredicted RBP26.71■■□□□ 1.87
FANCA-205ENST00000543736 ARHGEF11O15085 1522 aa26.69■■□□□ 1.86
FANCA-205ENST00000543736 CEP164Q9UPV0 1460 aa26.61■■□□□ 1.85
FANCA-205ENST00000543736 TRHP20396 242 aaPredicted RBP26.57■■□□□ 1.84
FANCA-205ENST00000543736 CYB5RLQ6IPT4 315 aa26.48■■□□□ 1.83
FANCA-205ENST00000543736 MROH2BQ7Z745 1585 aa26.47■■□□□ 1.83
FANCA-205ENST00000543736 FANCD2Q9BXW9 1451 aa26.47■■□□□ 1.83
FANCA-205ENST00000543736 ARAP1Q96P48 1450 aa26.36■■□□□ 1.81
FANCA-205ENST00000543736 URB2Q14146 1524 aaKnown RBP26.36■■□□□ 1.81
FANCA-205ENST00000543736 ZNF608Q9ULD9 1512 aaPredicted RBP26.24■■□□□ 1.79
FANCA-205ENST00000543736 CFTRP13569 1480 aa26.2■■□□□ 1.78
FANCA-205ENST00000543736 IFT140Q96RY7 1462 aa26.12■■□□□ 1.77
FANCA-205ENST00000543736 CHD1O14646 1710 aa26.1■■□□□ 1.77
FANCA-205ENST00000543736 WIZO95785 1651 aa26.09■■□□□ 1.77
FANCA-205ENST00000543736 RSF1Q96T23 1441 aaPredicted RBP26.09■■□□□ 1.77
FANCA-205ENST00000543736 EIF4G3O43432 1585 aaKnown RBP26.06■■□□□ 1.76
FANCA-205ENST00000543736 PRDM2Q13029 1718 aa25.88■■□□□ 1.73
FANCA-205ENST00000543736 TOPBP1Q92547 1522 aa25.84■■□□□ 1.73
FANCA-205ENST00000543736 ILDR1Q86SU0 546 aaPredicted RBP25.84■■□□□ 1.73
FANCA-205ENST00000543736 FBLN2P98095 1184 aa25.81■■□□□ 1.72
FANCA-205ENST00000543736 AQRO60306 1485 aaKnown RBP eCLIP25.8■■□□□ 1.725e-10■■■□□ 18.1
FANCA-205ENST00000543736 CLASP1Q7Z460 1538 aa25.78■■□□□ 1.72
FANCA-205ENST00000543736 TARBP1Q13395 1621 aaKnown RBP25.74■■□□□ 1.71
FANCA-205ENST00000543736 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
FANCA-205ENST00000543736 DNMBPQ6XZF7 1577 aa25.64■■□□□ 1.69
FANCA-205ENST00000543736 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
FANCA-205ENST00000543736 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
FANCA-205ENST00000543736 GAPVD1Q14C86 1478 aa25.55■■□□□ 1.68
FANCA-205ENST00000543736 SNAPC4Q5SXM2 1469 aa25.53■■□□□ 1.68
FANCA-205ENST00000543736 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
FANCA-205ENST00000543736 TDRD9Q8NDG6 1382 aaKnown RBP25.44■■□□□ 1.66
FANCA-205ENST00000543736 RAD54L2Q9Y4B4 1467 aa25.42■■□□□ 1.66
FANCA-205ENST00000543736 CHMP7Q8WUX9 453 aaPredicted RBP25.42■■□□□ 1.66
FANCA-205ENST00000543736 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
FANCA-205ENST00000543736 KIF13AQ9H1H9 1805 aa25.38■■□□□ 1.65
FANCA-205ENST00000543736 CCDC88BA6NC98 1476 aa25.36■■□□□ 1.65
FANCA-205ENST00000543736 WDR97A6NE52 1622 aa25.35■■□□□ 1.65
FANCA-205ENST00000543736 KDM4FA0A1W2PPD8 638 aa25.33■■□□□ 1.65
FANCA-205ENST00000543736 SYNJ2O15056 1496 aa25.33■■□□□ 1.65
FANCA-205ENST00000543736 SOGA1O94964 1423 aa25.29■■□□□ 1.64
FANCA-205ENST00000543736 ERCC6L2Q5T890 1561 aa25.29■■□□□ 1.64
FANCA-205ENST00000543736 GRIN2BQ13224 1484 aa25.25■■□□□ 1.63
FANCA-205ENST00000543736 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
FANCA-205ENST00000543736 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
FANCA-205ENST00000543736 CEP170Q5SW79 1584 aa25.09■■□□□ 1.61
FANCA-205ENST00000543736 KDM6BO15054 1643 aa25.05■■□□□ 1.6
FANCA-205ENST00000543736 ABCC10Q5T3U5 1492 aa25.02■■□□□ 1.6
FANCA-205ENST00000543736 FAM69CQ0P6D2 419 aa24.99■■□□□ 1.59
FANCA-205ENST00000543736 SHROOM2Q13796 1616 aa24.99■■□□□ 1.59
FANCA-205ENST00000543736 DIP2BQ9P265 1576 aa24.97■■□□□ 1.59
FANCA-205ENST00000543736 HECW2Q9P2P5 1572 aa24.96■■□□□ 1.59
FANCA-205ENST00000543736 CUX1P39880 1505 aa24.95■■□□□ 1.58
FANCA-205ENST00000543736 GRIN2AQ12879 1464 aa24.95■■□□□ 1.58
FANCA-205ENST00000543736 NUP160Q12769 1436 aa24.93■■□□□ 1.58
FANCA-205ENST00000543736 ABCA5Q8WWZ7 1642 aa24.91■■□□□ 1.58
FANCA-205ENST00000543736 MAPKBP1O60336 1514 aa24.89■■□□□ 1.57
FANCA-205ENST00000543736 ADGRL1O94910 1474 aa24.87■■□□□ 1.57
FANCA-205ENST00000543736 TSPOAP1O95153 1857 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms