RNA–Protein interactions for RNA: ENST00000433867.5

PRKD2-202, Transcript of protein kinase D2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PRKD2, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-202ENST00000433867 NISCHQ9Y2I1 1504 aa30.58■■■□□ 2.49
PRKD2-202ENST00000433867 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
PRKD2-202ENST00000433867 DCAF8L2P0C7V8 631 aa26.58■■□□□ 1.85
PRKD2-202ENST00000433867 SUPT5HO00267 1087 aaKnown RBP26.21■■□□□ 1.79
PRKD2-202ENST00000433867 CCDC180Q9P1Z9 1646 aa25.73■■□□□ 1.71
PRKD2-202ENST00000433867 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
PRKD2-202ENST00000433867 CHIC1Q5VXU3 224 aa24.96■■□□□ 1.59
PRKD2-202ENST00000433867 ABCC9O60706 1549 aa24.85■■□□□ 1.57
PRKD2-202ENST00000433867 DCAF1Q9Y4B6 1507 aa24.74■■□□□ 1.55
PRKD2-202ENST00000433867 SCRIBQ14160 1630 aa24.64■■□□□ 1.54
PRKD2-202ENST00000433867 MYO15BQ96JP2 1530 aa24.6■■□□□ 1.53
PRKD2-202ENST00000433867 LOC105371045A0A1W2PR82 267 aa24.5■■□□□ 1.51
PRKD2-202ENST00000433867 EHMT2Q96KQ7 1210 aa24.44■■□□□ 1.5
PRKD2-202ENST00000433867 FAM9AQ8IZU1 332 aaPredicted RBP24.37■■□□□ 1.49
PRKD2-202ENST00000433867 PCGF6Q9BYE7 350 aa24.3■■□□□ 1.48
PRKD2-202ENST00000433867 RSF1Q96T23 1441 aaPredicted RBP24.26■■□□□ 1.47
PRKD2-202ENST00000433867 TRIM41Q8WV44 630 aa24.25■■□□□ 1.47
PRKD2-202ENST00000433867 CECR2Q9BXF3 1484 aa24.11■■□□□ 1.45
PRKD2-202ENST00000433867 NACADO15069 1562 aa24.07■■□□□ 1.44
PRKD2-202ENST00000433867 PABPN1Q86U42 306 aaKnown RBP eCLIP23.99■■□□□ 1.43
PRKD2-202ENST00000433867 RB1CC1Q8TDY2 1594 aa23.93■■□□□ 1.42
PRKD2-202ENST00000433867 MROH2BQ7Z745 1585 aa23.89■■□□□ 1.41
PRKD2-202ENST00000433867 HRCP23327 699 aa23.79■■□□□ 1.4
PRKD2-202ENST00000433867 WIZO95785 1651 aa23.71■■□□□ 1.39
PRKD2-202ENST00000433867 PPARGC1BQ86YN6 1023 aaKnown RBP23.7■■□□□ 1.38
PRKD2-202ENST00000433867 TRIM26Q12899 539 aaPredicted RBP23.59■■□□□ 1.37
PRKD2-202ENST00000433867 TTBK1Q5TCY1 1321 aaPredicted RBP23.52■■□□□ 1.36
PRKD2-202ENST00000433867 BAZ1AQ9NRL2 1556 aaPredicted RBP23.5■■□□□ 1.35
PRKD2-202ENST00000433867 CCDC88BA6NC98 1476 aa23.31■■□□□ 1.32
PRKD2-202ENST00000433867 UBTFP17480 764 aaKnown RBP23.28■■□□□ 1.32
PRKD2-202ENST00000433867 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
PRKD2-202ENST00000433867 ABCC8Q09428 1581 aa23.28■■□□□ 1.32
PRKD2-202ENST00000433867 RANGAP1P46060 587 aaPredicted RBP23.22■■□□□ 1.31
PRKD2-202ENST00000433867 UNC13AQ9UPW8 1703 aa23.22■■□□□ 1.31
PRKD2-202ENST00000433867 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
PRKD2-202ENST00000433867 SOGA1O94964 1423 aa23.09■■□□□ 1.29
PRKD2-202ENST00000433867 SMARCA2P51531 1590 aa23.09■■□□□ 1.29
PRKD2-202ENST00000433867 BICRAQ9NZM4 1560 aa23.08■■□□□ 1.28
PRKD2-202ENST00000433867 CSRNP3Q8WYN3 585 aa23.06■■□□□ 1.28
PRKD2-202ENST00000433867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.98■■□□□ 1.27
PRKD2-202ENST00000433867 RUSC2Q8N2Y8 1516 aa22.96■■□□□ 1.27
PRKD2-202ENST00000433867 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
PRKD2-202ENST00000433867 CCER1Q8TC90 406 aaPredicted RBP22.92■■□□□ 1.26
PRKD2-202ENST00000433867 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
PRKD2-202ENST00000433867 ZEB1P37275 1124 aaPredicted RBP22.9■■□□□ 1.26
PRKD2-202ENST00000433867 ATAD2BQ9ULI0 1458 aa22.88■■□□□ 1.25
PRKD2-202ENST00000433867 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
PRKD2-202ENST00000433867 CEP162Q5TB80 1403 aa22.83■■□□□ 1.24
PRKD2-202ENST00000433867 APLP2Q06481 763 aa22.73■■□□□ 1.23
PRKD2-202ENST00000433867 TNIKQ9UKE5 1360 aa22.7■■□□□ 1.22
PRKD2-202ENST00000433867 HNRNPUL2Q1KMD3 747 aaKnown RBP22.67■■□□□ 1.22
PRKD2-202ENST00000433867 EEA1Q15075 1411 aa22.64■■□□□ 1.21
PRKD2-202ENST00000433867 GOLGA3Q08378 1498 aa22.62■■□□□ 1.21
PRKD2-202ENST00000433867 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
PRKD2-202ENST00000433867 PEG3Q9GZU2 1588 aa22.57■■□□□ 1.2
PRKD2-202ENST00000433867 CLIP1P30622 1438 aa22.51■■□□□ 1.19
PRKD2-202ENST00000433867 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
PRKD2-202ENST00000433867 RAPGEF2Q9Y4G8 1499 aa22.46■■□□□ 1.19
PRKD2-202ENST00000433867 NCAPD3P42695 1498 aa22.38■■□□□ 1.17
PRKD2-202ENST00000433867 ATP1B4Q9UN42 357 aaPredicted RBP22.36■■□□□ 1.17
PRKD2-202ENST00000433867 ITGAEP38570 1179 aa22.32■■□□□ 1.16
PRKD2-202ENST00000433867 P3H3Q8IVL6 736 aa22.26■■□□□ 1.15
PRKD2-202ENST00000433867 KIF27Q86VH2 1401 aa22.23■■□□□ 1.15
PRKD2-202ENST00000433867 VPS8Q8N3P4 1428 aa22.23■■□□□ 1.15
PRKD2-202ENST00000433867 TOP2BQ02880 1626 aa22.22■■□□□ 1.15
PRKD2-202ENST00000433867 DIEXFQ68CQ4 756 aaKnown RBP22.2■■□□□ 1.14
PRKD2-202ENST00000433867 CUX1P39880 1505 aa22.2■■□□□ 1.14
PRKD2-202ENST00000433867 HMGXB3Q12766 1538 aa22.19■■□□□ 1.14
PRKD2-202ENST00000433867 KANK4Q5T7N3 995 aaPredicted RBP22.19■■□□□ 1.14
PRKD2-202ENST00000433867 KIF21BO75037 1637 aa22.19■■□□□ 1.14
PRKD2-202ENST00000433867 CFTRP13569 1480 aa22.17■■□□□ 1.14
PRKD2-202ENST00000433867 CADPSQ9ULU8 1353 aa22.15■■□□□ 1.14
PRKD2-202ENST00000433867 CUX2O14529 1486 aa22.15■■□□□ 1.14
PRKD2-202ENST00000433867 PRXQ9BXM0 1461 aa22.05■■□□□ 1.12
PRKD2-202ENST00000433867 DNAJC5BQ9UF47 199 aa22.03■■□□□ 1.12
PRKD2-202ENST00000433867 YTHDC1Q96MU7 727 aaKnown RBP22.02■■□□□ 1.12
PRKD2-202ENST00000433867 CC2D2AQ9P2K1 1620 aa22.02■■□□□ 1.12
PRKD2-202ENST00000433867 BIVM-ERCC5R4GMW8 1640 aa22.01■■□□□ 1.11
PRKD2-202ENST00000433867 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
PRKD2-202ENST00000433867 IGF1RP08069 1367 aa21.99■■□□□ 1.11
PRKD2-202ENST00000433867 ZNF316A6NFI3 1004 aaPredicted RBP21.99■■□□□ 1.11
PRKD2-202ENST00000433867 ARAP1Q96P48 1450 aa21.98■■□□□ 1.11
PRKD2-202ENST00000433867 NESP48681 1621 aa21.96■■□□□ 1.11
PRKD2-202ENST00000433867 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
PRKD2-202ENST00000433867 FAM50AQ14320 339 aaKnown RBP21.95■■□□□ 1.1
PRKD2-202ENST00000433867 FANCD2Q9BXW9 1451 aa21.93■■□□□ 1.1
PRKD2-202ENST00000433867 RAD54L2Q9Y4B4 1467 aa21.91■■□□□ 1.1
PRKD2-202ENST00000433867 ERICH3Q5RHP9 1530 aa21.89■■□□□ 1.09
PRKD2-202ENST00000433867 SCAF1Q9H7N4 1312 aaKnown RBP21.85■■□□□ 1.09
PRKD2-202ENST00000433867 ARHGAP35Q9NRY4 1499 aa21.85■■□□□ 1.09
PRKD2-202ENST00000433867 TDRD9Q8NDG6 1382 aaKnown RBP21.82■■□□□ 1.08
PRKD2-202ENST00000433867 NEUROD1Q13562 356 aa21.82■■□□□ 1.08
PRKD2-202ENST00000433867 CENPBP07199 599 aaPredicted RBP21.78■■□□□ 1.08
PRKD2-202ENST00000433867 ARID3CA6NKF2 412 aa21.78■■□□□ 1.08
PRKD2-202ENST00000433867 CCNB3Q8WWL7 1395 aa21.75■■□□□ 1.07
PRKD2-202ENST00000433867 MIER1Q8N108 512 aa21.74■■□□□ 1.07
PRKD2-202ENST00000433867 ACIN1Q9UKV3 1341 aaKnown RBP21.72■■□□□ 1.07
PRKD2-202ENST00000433867 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
PRKD2-202ENST00000433867 POLA1P09884 1462 aaPredicted RBP21.69■■□□□ 1.06
PRKD2-202ENST00000433867 TOPBP1Q92547 1522 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms