RNA–Protein interactions for RNA: ENST00000616054.1

CCL18-201, Transcript of C-C motif chemokine ligand 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL18, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18-201ENST00000616054 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
CCL18-201ENST00000616054 CCDC180Q9P1Z9 1646 aa29.98■■■□□ 2.39
CCL18-201ENST00000616054 ABCC9O60706 1549 aa29.85■■■□□ 2.37
CCL18-201ENST00000616054 AEBP2Q6ZN18 517 aaPredicted RBP28.73■■■□□ 2.19
CCL18-201ENST00000616054 RB1CC1Q8TDY2 1594 aa28.52■■■□□ 2.16
CCL18-201ENST00000616054 NACADO15069 1562 aa28.37■■■□□ 2.13
CCL18-201ENST00000616054 DCAF8L2P0C7V8 631 aa28.31■■■□□ 2.12
CCL18-201ENST00000616054 MYO15BQ96JP2 1530 aa28.06■■■□□ 2.08
CCL18-201ENST00000616054 PABPN1Q86U42 306 aaKnown RBP eCLIP27.84■■■□□ 2.05
CCL18-201ENST00000616054 DNAJC5BQ9UF47 199 aa27.82■■■□□ 2.04
CCL18-201ENST00000616054 ZCCHC6Q5VYS8 1495 aaKnown RBP27.82■■■□□ 2.04
CCL18-201ENST00000616054 DCAF1Q9Y4B6 1507 aa27.74■■■□□ 2.03
CCL18-201ENST00000616054 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
CCL18-201ENST00000616054 BICRAQ9NZM4 1560 aa27.58■■■□□ 2.01
CCL18-201ENST00000616054 CHIC1Q5VXU3 224 aa27.5■■□□□ 1.99
CCL18-201ENST00000616054 SHROOM4Q9ULL8 1493 aa27.38■■□□□ 1.97
CCL18-201ENST00000616054 SCRIBQ14160 1630 aa27.31■■□□□ 1.96
CCL18-201ENST00000616054 EIF4G1Q04637 1599 aaKnown RBP26.95■■□□□ 1.91
CCL18-201ENST00000616054 CC2D2AQ9P2K1 1620 aa26.94■■□□□ 1.9
CCL18-201ENST00000616054 CECR2Q9BXF3 1484 aa26.9■■□□□ 1.9
CCL18-201ENST00000616054 NCAPD3P42695 1498 aa26.2■■□□□ 1.78
CCL18-201ENST00000616054 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
CCL18-201ENST00000616054 SMARCA4P51532 1647 aa26.09■■□□□ 1.77
CCL18-201ENST00000616054 SMARCA2P51531 1590 aa26.08■■□□□ 1.77
CCL18-201ENST00000616054 BAZ1AQ9NRL2 1556 aaPredicted RBP26.05■■□□□ 1.76
CCL18-201ENST00000616054 HMGXB3Q12766 1538 aa25.99■■□□□ 1.75
CCL18-201ENST00000616054 BAZ1BQ9UIG0 1483 aaKnown RBP25.89■■□□□ 1.74
CCL18-201ENST00000616054 PEG3Q9GZU2 1588 aa25.85■■□□□ 1.73
CCL18-201ENST00000616054 ERCC6Q03468 1493 aa25.83■■□□□ 1.73
CCL18-201ENST00000616054 MROH2BQ7Z745 1585 aa25.8■■□□□ 1.72
CCL18-201ENST00000616054 CUX2O14529 1486 aa25.72■■□□□ 1.71
CCL18-201ENST00000616054 NESP48681 1621 aa25.65■■□□□ 1.7
CCL18-201ENST00000616054 LAMC3Q9Y6N6 1575 aa25.57■■□□□ 1.68
CCL18-201ENST00000616054 DNAJC5Q9H3Z4 198 aa25.52■■□□□ 1.68
CCL18-201ENST00000616054 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
CCL18-201ENST00000616054 WIZO95785 1651 aa25.45■■□□□ 1.67
CCL18-201ENST00000616054 CADPSQ9ULU8 1353 aa25.43■■□□□ 1.66
CCL18-201ENST00000616054 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
CCL18-201ENST00000616054 THOC2Q8NI27 1593 aaKnown RBP25.34■■□□□ 1.65
CCL18-201ENST00000616054 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
CCL18-201ENST00000616054 TOP2AP11388 1531 aaKnown RBP25.22■■□□□ 1.63
CCL18-201ENST00000616054 MRC2Q9UBG0 1479 aa25.19■■□□□ 1.62
CCL18-201ENST00000616054 CFTRP13569 1480 aa25.15■■□□□ 1.62
CCL18-201ENST00000616054 CEP164Q9UPV0 1460 aa25.14■■□□□ 1.61
CCL18-201ENST00000616054 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
CCL18-201ENST00000616054 WDR62O43379 1518 aa25.09■■□□□ 1.61
CCL18-201ENST00000616054 CCDC88BA6NC98 1476 aa24.94■■□□□ 1.58
CCL18-201ENST00000616054 URB2Q14146 1524 aaKnown RBP24.84■■□□□ 1.57
CCL18-201ENST00000616054 PRDM2Q13029 1718 aa24.77■■□□□ 1.56
CCL18-201ENST00000616054 ABCC8Q09428 1581 aa24.68■■□□□ 1.54
CCL18-201ENST00000616054 IFT140Q96RY7 1462 aa24.64■■□□□ 1.53
CCL18-201ENST00000616054 TOPBP1Q92547 1522 aa24.63■■□□□ 1.53
CCL18-201ENST00000616054 OSCARQ8IYS5 282 aa24.62■■□□□ 1.53
CCL18-201ENST00000616054 DNMBPQ6XZF7 1577 aa24.55■■□□□ 1.52
CCL18-201ENST00000616054 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
CCL18-201ENST00000616054 SENP3Q9H4L4 574 aaPredicted RBP24.49■■□□□ 1.51
CCL18-201ENST00000616054 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
CCL18-201ENST00000616054 SUPT5HO00267 1087 aaKnown RBP24.4■■□□□ 1.5
CCL18-201ENST00000616054 POLA1P09884 1462 aaPredicted RBP24.39■■□□□ 1.49
CCL18-201ENST00000616054 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
CCL18-201ENST00000616054 TARBP1Q13395 1621 aaKnown RBP24.35■■□□□ 1.49
CCL18-201ENST00000616054 SOGA1O94964 1423 aa24.33■■□□□ 1.49
CCL18-201ENST00000616054 AQRO60306 1485 aaKnown RBP eCLIP24.33■■□□□ 1.49
CCL18-201ENST00000616054 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
CCL18-201ENST00000616054 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
CCL18-201ENST00000616054 TDRD9Q8NDG6 1382 aaKnown RBP24.23■■□□□ 1.47
CCL18-201ENST00000616054 CUX1P39880 1505 aa24.23■■□□□ 1.47
CCL18-201ENST00000616054 FBLN2P98095 1184 aa24.22■■□□□ 1.47
CCL18-201ENST00000616054 WDR97A6NE52 1622 aa24.2■■□□□ 1.46
CCL18-201ENST00000616054 PHF23Q9BUL5 403 aaPredicted RBP24.17■■□□□ 1.46
CCL18-201ENST00000616054 RIMBP3CA6NJZ7 1639 aa24.14■■□□□ 1.45
CCL18-201ENST00000616054 RIMBP3BA6NNM3 1639 aa24.14■■□□□ 1.45
CCL18-201ENST00000616054 RIMBP3Q9UFD9 1639 aa24.14■■□□□ 1.45
CCL18-201ENST00000616054 ARHGEF11O15085 1522 aa24.13■■□□□ 1.45
CCL18-201ENST00000616054 GRIN2BQ13224 1484 aa24.11■■□□□ 1.45
CCL18-201ENST00000616054 SNAPC4Q5SXM2 1469 aa24.1■■□□□ 1.45
CCL18-201ENST00000616054 CHD1O14646 1710 aa24.09■■□□□ 1.45
CCL18-201ENST00000616054 CHMP7Q8WUX9 453 aaPredicted RBP24.09■■□□□ 1.45
CCL18-201ENST00000616054 MAGI1Q96QZ7 1491 aaPredicted RBP24.08■■□□□ 1.45
CCL18-201ENST00000616054 GAPVD1Q14C86 1478 aa24.02■■□□□ 1.44
CCL18-201ENST00000616054 ABCA10Q8WWZ4 1543 aa24.01■■□□□ 1.43
CCL18-201ENST00000616054 CYB5RLQ6IPT4 315 aa24■■□□□ 1.43
CCL18-201ENST00000616054 WRNQ14191 1432 aaPredicted RBP eCLIP24■■□□□ 1.43
CCL18-201ENST00000616054 SYNJ2O15056 1496 aa23.99■■□□□ 1.43
CCL18-201ENST00000616054 SYNJ1O43426 1573 aa23.95■■□□□ 1.43
CCL18-201ENST00000616054 TOP2BQ02880 1626 aa23.9■■□□□ 1.42
CCL18-201ENST00000616054 ABCA5Q8WWZ7 1642 aa23.9■■□□□ 1.42
CCL18-201ENST00000616054 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
CCL18-201ENST00000616054 PBRM1Q86U86 1689 aa23.89■■□□□ 1.41
CCL18-201ENST00000616054 ARAP1Q96P48 1450 aa23.88■■□□□ 1.41
CCL18-201ENST00000616054 BIVM-ERCC5R4GMW8 1640 aa23.87■■□□□ 1.41
CCL18-201ENST00000616054 GRIN2AQ12879 1464 aa23.76■■□□□ 1.39
CCL18-201ENST00000616054 FHAD1B1AJZ9 1412 aa23.75■■□□□ 1.39
CCL18-201ENST00000616054 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
CCL18-201ENST00000616054 TRHP20396 242 aaPredicted RBP23.72■■□□□ 1.39
CCL18-201ENST00000616054 ADAMTS12P58397 1594 aa23.72■■□□□ 1.39
CCL18-201ENST00000616054 NUP160Q12769 1436 aa23.68■■□□□ 1.38
CCL18-201ENST00000616054 CEP170Q5SW79 1584 aa23.6■■□□□ 1.37
CCL18-201ENST00000616054 KIF27Q86VH2 1401 aa23.54■■□□□ 1.36
CCL18-201ENST00000616054 SHROOM2Q13796 1616 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms