Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DPA1P20036 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 PFN1P12-201ENST00000455938 534 ntBASIC14.51□□□□□ -0.09
HLA-DPA1P20036 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 SERPINA13P-202ENST00000478994 924 ntBASIC14.51□□□□□ -0.09
HLA-DPA1P20036 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.51□□□□□ -0.09
HLA-DPA1P20036 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 CCT8L1P-201ENST00000465400 1674 ntBASIC14.51□□□□□ -0.09
HLA-DPA1P20036 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 AC018735.1-201ENST00000437208 1502 ntBASIC14.51□□□□□ -0.09
HLA-DPA1P20036 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DPA1P20036 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 AL731571.1-201ENST00000617058 5428 ntBASIC14.5□□□□□ -0.09
HLA-DPA1P20036 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 DPM3-202ENST00000368399 517 ntBASIC14.5□□□□□ -0.09
HLA-DPA1P20036 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 AC005740.2-201ENST00000511085 419 ntBASIC14.5□□□□□ -0.09
HLA-DPA1P20036 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 AL512310.5-201ENST00000551999 515 ntBASIC14.5□□□□□ -0.09
HLA-DPA1P20036 SNORD3B-2-202ENST00000571722 791 ntBASIC14.5□□□□□ -0.09
HLA-DPA1P20036 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 AL008638.5-201ENST00000623814 1298 ntBASIC14.5□□□□□ -0.09
HLA-DPA1P20036 AC092299.1-201ENST00000632679 757 ntBASIC14.5□□□□□ -0.09
HLA-DPA1P20036 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DPA1P20036 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms