RNA–Protein interactions for RNA: ENST00000262101.9

MSR1-201, Transcript of macrophage scavenger receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSR1, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-201ENST00000262101 NISCHQ9Y2I1 1504 aa34.94■■■■□ 3.18
MSR1-201ENST00000262101 CCDC180Q9P1Z9 1646 aa30.83■■■□□ 2.53
MSR1-201ENST00000262101 ABCC9O60706 1549 aa30.25■■■□□ 2.43
MSR1-201ENST00000262101 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
MSR1-201ENST00000262101 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
MSR1-201ENST00000262101 NACADO15069 1562 aa29.02■■■□□ 2.24
MSR1-201ENST00000262101 RB1CC1Q8TDY2 1594 aa29.01■■■□□ 2.23
MSR1-201ENST00000262101 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
MSR1-201ENST00000262101 DCAF1Q9Y4B6 1507 aa28.81■■■□□ 2.2
MSR1-201ENST00000262101 PABPN1Q86U42 306 aaKnown RBP eCLIP28.41■■■□□ 2.14
MSR1-201ENST00000262101 UNC13AQ9UPW8 1703 aa28.38■■■□□ 2.13
MSR1-201ENST00000262101 SCRIBQ14160 1630 aa28.32■■■□□ 2.12
MSR1-201ENST00000262101 BICRAQ9NZM4 1560 aa28.21■■■□□ 2.11
MSR1-201ENST00000262101 SHROOM4Q9ULL8 1493 aa27.9■■■□□ 2.06
MSR1-201ENST00000262101 DNAJC5BQ9UF47 199 aa27.75■■■□□ 2.03
MSR1-201ENST00000262101 EIF4G1Q04637 1599 aaKnown RBP27.43■■□□□ 1.98
MSR1-201ENST00000262101 CECR2Q9BXF3 1484 aa27.31■■□□□ 1.96
MSR1-201ENST00000262101 CC2D2AQ9P2K1 1620 aa27.3■■□□□ 1.96
MSR1-201ENST00000262101 SMARCA4P51532 1647 aa27.04■■□□□ 1.92
MSR1-201ENST00000262101 BAZ1AQ9NRL2 1556 aaPredicted RBP27.03■■□□□ 1.92
MSR1-201ENST00000262101 MROH2BQ7Z745 1585 aa26.99■■□□□ 1.91
MSR1-201ENST00000262101 ATAD2BQ9ULI0 1458 aa26.91■■□□□ 1.9
MSR1-201ENST00000262101 NCAPD3P42695 1498 aa26.84■■□□□ 1.89
MSR1-201ENST00000262101 SMARCA2P51531 1590 aa26.79■■□□□ 1.88
MSR1-201ENST00000262101 RSF1Q96T23 1441 aaPredicted RBP26.76■■□□□ 1.87
MSR1-201ENST00000262101 PEG3Q9GZU2 1588 aa26.73■■□□□ 1.87
MSR1-201ENST00000262101 WIZO95785 1651 aa26.7■■□□□ 1.86
MSR1-201ENST00000262101 BAZ1BQ9UIG0 1483 aaKnown RBP26.67■■□□□ 1.86
MSR1-201ENST00000262101 HMGXB3Q12766 1538 aa26.64■■□□□ 1.86
MSR1-201ENST00000262101 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
MSR1-201ENST00000262101 TOP2AP11388 1531 aaKnown RBP26.33■■□□□ 1.81
MSR1-201ENST00000262101 NESP48681 1621 aa26.25■■□□□ 1.79
MSR1-201ENST00000262101 CCDC88BA6NC98 1476 aa26.13■■□□□ 1.77
MSR1-201ENST00000262101 CADPSQ9ULU8 1353 aa26.11■■□□□ 1.77
MSR1-201ENST00000262101 LAMC3Q9Y6N6 1575 aa26.04■■□□□ 1.76
MSR1-201ENST00000262101 ERCC6Q03468 1493 aa26■■□□□ 1.75
MSR1-201ENST00000262101 CFTRP13569 1480 aa25.96■■□□□ 1.75
MSR1-201ENST00000262101 PDS5BQ9NTI5 1447 aa25.92■■□□□ 1.74
MSR1-201ENST00000262101 KIF21AQ7Z4S6 1674 aa25.82■■□□□ 1.72
MSR1-201ENST00000262101 FANCD2Q9BXW9 1451 aa25.8■■□□□ 1.72
MSR1-201ENST00000262101 CEP164Q9UPV0 1460 aa25.7■■□□□ 1.71
MSR1-201ENST00000262101 THOC2Q8NI27 1593 aaKnown RBP25.67■■□□□ 1.7
MSR1-201ENST00000262101 MRC2Q9UBG0 1479 aa25.62■■□□□ 1.69
MSR1-201ENST00000262101 PRDM2Q13029 1718 aa25.61■■□□□ 1.69
MSR1-201ENST00000262101 CUX2O14529 1486 aa25.57■■□□□ 1.68
MSR1-201ENST00000262101 URB2Q14146 1524 aaKnown RBP25.54■■□□□ 1.68
MSR1-201ENST00000262101 WDR62O43379 1518 aa25.51■■□□□ 1.67
MSR1-201ENST00000262101 TOPBP1Q92547 1522 aa25.39■■□□□ 1.66
MSR1-201ENST00000262101 DNMBPQ6XZF7 1577 aa25.32■■□□□ 1.64
MSR1-201ENST00000262101 ABCC8Q09428 1581 aa25.31■■□□□ 1.64
MSR1-201ENST00000262101 CUX1P39880 1505 aa25.28■■□□□ 1.64
MSR1-201ENST00000262101 POLA1P09884 1462 aaPredicted RBP25.21■■□□□ 1.63
MSR1-201ENST00000262101 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.62
MSR1-201ENST00000262101 FGD5Q6ZNL6 1462 aa25.16■■□□□ 1.62
MSR1-201ENST00000262101 RAD54L2Q9Y4B4 1467 aa25.16■■□□□ 1.62
MSR1-201ENST00000262101 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
MSR1-201ENST00000262101 ZNF608Q9ULD9 1512 aaPredicted RBP25.14■■□□□ 1.61
MSR1-201ENST00000262101 SOGA1O94964 1423 aa25.13■■□□□ 1.61
MSR1-201ENST00000262101 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
MSR1-201ENST00000262101 TARBP1Q13395 1621 aaKnown RBP25.08■■□□□ 1.61
MSR1-201ENST00000262101 TOP2BQ02880 1626 aa25.05■■□□□ 1.6
MSR1-201ENST00000262101 TDRD9Q8NDG6 1382 aaKnown RBP25.04■■□□□ 1.6
MSR1-201ENST00000262101 AQRO60306 1485 aaKnown RBP eCLIP25.03■■□□□ 1.6
MSR1-201ENST00000262101 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
MSR1-201ENST00000262101 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
MSR1-201ENST00000262101 ABCA10Q8WWZ4 1543 aa24.89■■□□□ 1.58
MSR1-201ENST00000262101 WDR97A6NE52 1622 aa24.84■■□□□ 1.57
MSR1-201ENST00000262101 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
MSR1-201ENST00000262101 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
MSR1-201ENST00000262101 FBLN2P98095 1184 aa24.76■■□□□ 1.55
MSR1-201ENST00000262101 GRIN2BQ13224 1484 aa24.75■■□□□ 1.55
MSR1-201ENST00000262101 DNAJC5Q9H3Z4 198 aa24.75■■□□□ 1.55
MSR1-201ENST00000262101 ABCA5Q8WWZ7 1642 aa24.74■■□□□ 1.55
MSR1-201ENST00000262101 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
MSR1-201ENST00000262101 OSCARQ8IYS5 282 aa24.7■■□□□ 1.54
MSR1-201ENST00000262101 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
MSR1-201ENST00000262101 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
MSR1-201ENST00000262101 CHMP7Q8WUX9 453 aaPredicted RBP24.65■■□□□ 1.54
MSR1-201ENST00000262101 MAGI1Q96QZ7 1491 aaPredicted RBP24.64■■□□□ 1.53
MSR1-201ENST00000262101 KIF27Q86VH2 1401 aa24.62■■□□□ 1.53
MSR1-201ENST00000262101 RUSC2Q8N2Y8 1516 aa24.6■■□□□ 1.53
MSR1-201ENST00000262101 IGF1RP08069 1367 aa24.59■■□□□ 1.53
MSR1-201ENST00000262101 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
MSR1-201ENST00000262101 CHD1O14646 1710 aa24.57■■□□□ 1.52
MSR1-201ENST00000262101 ERICH3Q5RHP9 1530 aa24.57■■□□□ 1.52
MSR1-201ENST00000262101 FHAD1B1AJZ9 1412 aa24.51■■□□□ 1.51
MSR1-201ENST00000262101 ADAMTS12P58397 1594 aa24.49■■□□□ 1.51
MSR1-201ENST00000262101 GRIN2AQ12879 1464 aa24.44■■□□□ 1.5
MSR1-201ENST00000262101 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
MSR1-201ENST00000262101 FAM9AQ8IZU1 332 aaPredicted RBP24.4■■□□□ 1.5
MSR1-201ENST00000262101 CEP170Q5SW79 1584 aa24.33■■□□□ 1.49
MSR1-201ENST00000262101 CUL7Q14999 1698 aa24.33■■□□□ 1.49
MSR1-201ENST00000262101 NUP160Q12769 1436 aa24.32■■□□□ 1.48
MSR1-201ENST00000262101 CLASP1Q7Z460 1538 aa24.31■■□□□ 1.48
MSR1-201ENST00000262101 CSRNP3Q8WYN3 585 aa24.31■■□□□ 1.48
MSR1-201ENST00000262101 RAPGEF2Q9Y4G8 1499 aa24.24■■□□□ 1.47
MSR1-201ENST00000262101 ARHGEF11O15085 1522 aa24.23■■□□□ 1.47
MSR1-201ENST00000262101 PRXQ9BXM0 1461 aa24.21■■□□□ 1.47
MSR1-201ENST00000262101 EEA1Q15075 1411 aa24.2■■□□□ 1.46
MSR1-201ENST00000262101 RIMBP3CA6NJZ7 1639 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms