Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.08■□□□□ 0.01
SHKBP1Q8TBC3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 RPL7P35-201ENST00000446943 740 ntBASIC15.08■□□□□ 0
SHKBP1Q8TBC3 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 AC079112.1-201ENST00000454972 939 ntBASIC15.08■□□□□ 0
SHKBP1Q8TBC3 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 DNM1P30-201ENST00000563586 452 ntBASIC15.08■□□□□ 0
SHKBP1Q8TBC3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 CICP17-201ENST00000418553 2377 ntBASIC15.08■□□□□ 0
SHKBP1Q8TBC3 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SHKBP1Q8TBC3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 MARK2P16-201ENST00000605714 1723 ntBASIC15.07■□□□□ 0
SHKBP1Q8TBC3 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 AC092580.1-201ENST00000433998 658 ntBASIC15.07■□□□□ 0
SHKBP1Q8TBC3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.07■□□□□ 0
SHKBP1Q8TBC3 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms