RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 NISCHQ9Y2I1 1504 aa34.05■■■■□ 3.04
GTF3C2-214ENST00000622534 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
GTF3C2-214ENST00000622534 ABCC9O60706 1549 aa28.65■■■□□ 2.18
GTF3C2-214ENST00000622534 ZCCHC6Q5VYS8 1495 aaKnown RBP28.51■■■□□ 2.15
GTF3C2-214ENST00000622534 DCAF1Q9Y4B6 1507 aa28.26■■■□□ 2.11
GTF3C2-214ENST00000622534 MYO15BQ96JP2 1530 aa28.15■■■□□ 2.1
GTF3C2-214ENST00000622534 NACADO15069 1562 aa28.06■■■□□ 2.08
GTF3C2-214ENST00000622534 DCAF8L2P0C7V8 631 aa28.06■■■□□ 2.08
GTF3C2-214ENST00000622534 RB1CC1Q8TDY2 1594 aa27.9■■■□□ 2.06
GTF3C2-214ENST00000622534 SCRIBQ14160 1630 aa27.34■■□□□ 1.97
GTF3C2-214ENST00000622534 UNC13AQ9UPW8 1703 aa27.22■■□□□ 1.95
GTF3C2-214ENST00000622534 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
GTF3C2-214ENST00000622534 BICRAQ9NZM4 1560 aa27.03■■□□□ 1.92
GTF3C2-214ENST00000622534 PABPN1Q86U42 306 aaKnown RBP eCLIP26.87■■□□□ 1.89
GTF3C2-214ENST00000622534 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
GTF3C2-214ENST00000622534 BAZ1AQ9NRL2 1556 aaPredicted RBP26.35■■□□□ 1.81
GTF3C2-214ENST00000622534 SMARCA4P51532 1647 aa26.26■■□□□ 1.79
GTF3C2-214ENST00000622534 EIF4G1Q04637 1599 aaKnown RBP26.26■■□□□ 1.79
GTF3C2-214ENST00000622534 MROH2BQ7Z745 1585 aa26.22■■□□□ 1.79
GTF3C2-214ENST00000622534 RSF1Q96T23 1441 aaPredicted RBP26.18■■□□□ 1.78
GTF3C2-214ENST00000622534 PEG3Q9GZU2 1588 aa26.05■■□□□ 1.76
GTF3C2-214ENST00000622534 SMARCA2P51531 1590 aa25.98■■□□□ 1.75
GTF3C2-214ENST00000622534 ATAD2BQ9ULI0 1458 aa25.97■■□□□ 1.75
GTF3C2-214ENST00000622534 CC2D2AQ9P2K1 1620 aa25.97■■□□□ 1.75
GTF3C2-214ENST00000622534 WIZO95785 1651 aa25.95■■□□□ 1.74
GTF3C2-214ENST00000622534 SUPT5HO00267 1087 aaKnown RBP25.9■■□□□ 1.74
GTF3C2-214ENST00000622534 NCAPD3P42695 1498 aa25.89■■□□□ 1.73
GTF3C2-214ENST00000622534 HMGXB3Q12766 1538 aa25.81■■□□□ 1.72
GTF3C2-214ENST00000622534 BAZ1BQ9UIG0 1483 aaKnown RBP25.77■■□□□ 1.72
GTF3C2-214ENST00000622534 TOP2AP11388 1531 aaKnown RBP25.76■■□□□ 1.71
GTF3C2-214ENST00000622534 DNAJC5BQ9UF47 199 aa25.72■■□□□ 1.71
GTF3C2-214ENST00000622534 CCDC88BA6NC98 1476 aa25.44■■□□□ 1.66
GTF3C2-214ENST00000622534 CADPSQ9ULU8 1353 aa25.15■■□□□ 1.62
GTF3C2-214ENST00000622534 CFTRP13569 1480 aa25.15■■□□□ 1.62
GTF3C2-214ENST00000622534 LAMC3Q9Y6N6 1575 aa25.08■■□□□ 1.61
GTF3C2-214ENST00000622534 NESP48681 1621 aa24.99■■□□□ 1.59
GTF3C2-214ENST00000622534 PRDM2Q13029 1718 aa24.97■■□□□ 1.59
GTF3C2-214ENST00000622534 PDS5BQ9NTI5 1447 aa24.89■■□□□ 1.58
GTF3C2-214ENST00000622534 FANCD2Q9BXW9 1451 aa24.83■■□□□ 1.57
GTF3C2-214ENST00000622534 CEP164Q9UPV0 1460 aa24.74■■□□□ 1.55
GTF3C2-214ENST00000622534 KIF21AQ7Z4S6 1674 aa24.71■■□□□ 1.55
GTF3C2-214ENST00000622534 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
GTF3C2-214ENST00000622534 WRNQ14191 1432 aaPredicted RBP eCLIP24.65■■□□□ 1.54
GTF3C2-214ENST00000622534 ERCC6Q03468 1493 aa24.65■■□□□ 1.54
GTF3C2-214ENST00000622534 CHIC1Q5VXU3 224 aa24.62■■□□□ 1.53
GTF3C2-214ENST00000622534 MRC2Q9UBG0 1479 aa24.59■■□□□ 1.53
GTF3C2-214ENST00000622534 CUX1P39880 1505 aa24.57■■□□□ 1.52
GTF3C2-214ENST00000622534 DNMBPQ6XZF7 1577 aa24.55■■□□□ 1.52
GTF3C2-214ENST00000622534 URB2Q14146 1524 aaKnown RBP24.54■■□□□ 1.52
GTF3C2-214ENST00000622534 TOP2BQ02880 1626 aa24.54■■□□□ 1.52
GTF3C2-214ENST00000622534 SYNJ1O43426 1573 aa24.54■■□□□ 1.52
GTF3C2-214ENST00000622534 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
GTF3C2-214ENST00000622534 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
GTF3C2-214ENST00000622534 THOC2Q8NI27 1593 aaKnown RBP24.51■■□□□ 1.51
GTF3C2-214ENST00000622534 WDR62O43379 1518 aa24.5■■□□□ 1.51
GTF3C2-214ENST00000622534 TRIM41Q8WV44 630 aa24.49■■□□□ 1.51
GTF3C2-214ENST00000622534 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
GTF3C2-214ENST00000622534 POLA1P09884 1462 aaPredicted RBP24.35■■□□□ 1.49
GTF3C2-214ENST00000622534 CUX2O14529 1486 aa24.26■■□□□ 1.47
GTF3C2-214ENST00000622534 SOGA1O94964 1423 aa24.26■■□□□ 1.47
GTF3C2-214ENST00000622534 IFT140Q96RY7 1462 aa24.22■■□□□ 1.47
GTF3C2-214ENST00000622534 ABCA10Q8WWZ4 1543 aa24.21■■□□□ 1.47
GTF3C2-214ENST00000622534 TARBP1Q13395 1621 aaKnown RBP24.21■■□□□ 1.47
GTF3C2-214ENST00000622534 RAD54L2Q9Y4B4 1467 aa24.21■■□□□ 1.47
GTF3C2-214ENST00000622534 WDR97A6NE52 1622 aa24.16■■□□□ 1.46
GTF3C2-214ENST00000622534 EEA1Q15075 1411 aa24.11■■□□□ 1.45
GTF3C2-214ENST00000622534 KIF27Q86VH2 1401 aa24.09■■□□□ 1.45
GTF3C2-214ENST00000622534 ABCA5Q8WWZ7 1642 aa24.04■■□□□ 1.44
GTF3C2-214ENST00000622534 RUSC2Q8N2Y8 1516 aa24.03■■□□□ 1.44
GTF3C2-214ENST00000622534 TDRD9Q8NDG6 1382 aaKnown RBP24.01■■□□□ 1.43
GTF3C2-214ENST00000622534 ZNF608Q9ULD9 1512 aaPredicted RBP24.01■■□□□ 1.43
GTF3C2-214ENST00000622534 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
GTF3C2-214ENST00000622534 AQRO60306 1485 aaKnown RBP eCLIP23.96■■□□□ 1.438e-7■■■■■ 26.9
GTF3C2-214ENST00000622534 EIF4G3O43432 1585 aaKnown RBP23.96■■□□□ 1.43
GTF3C2-214ENST00000622534 ERICH3Q5RHP9 1530 aa23.93■■□□□ 1.42
GTF3C2-214ENST00000622534 CSRNP3Q8WYN3 585 aa23.93■■□□□ 1.42
GTF3C2-214ENST00000622534 IGF1RP08069 1367 aa23.92■■□□□ 1.42
GTF3C2-214ENST00000622534 GRIN2BQ13224 1484 aa23.91■■□□□ 1.42
GTF3C2-214ENST00000622534 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
GTF3C2-214ENST00000622534 PBRM1Q86U86 1689 aa23.87■■□□□ 1.41
GTF3C2-214ENST00000622534 CUL7Q14999 1698 aa23.83■■□□□ 1.4
GTF3C2-214ENST00000622534 PRXQ9BXM0 1461 aa23.82■■□□□ 1.4
GTF3C2-214ENST00000622534 MAGI1Q96QZ7 1491 aaPredicted RBP23.79■■□□□ 1.4
GTF3C2-214ENST00000622534 CARMIL1Q5VZK9 1371 aa23.78■■□□□ 1.4
GTF3C2-214ENST00000622534 KIF21BO75037 1637 aa23.77■■□□□ 1.4
GTF3C2-214ENST00000622534 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
GTF3C2-214ENST00000622534 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
GTF3C2-214ENST00000622534 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
GTF3C2-214ENST00000622534 RAPGEF2Q9Y4G8 1499 aa23.72■■□□□ 1.39
GTF3C2-214ENST00000622534 SYNJ2O15056 1496 aa23.68■■□□□ 1.38
GTF3C2-214ENST00000622534 GOLGA3Q08378 1498 aa23.68■■□□□ 1.38
GTF3C2-214ENST00000622534 GRIN2AQ12879 1464 aa23.6■■□□□ 1.37
GTF3C2-214ENST00000622534 CHMP7Q8WUX9 453 aaPredicted RBP23.58■■□□□ 1.37
GTF3C2-214ENST00000622534 LOC105371045A0A1W2PR82 267 aa23.56■■□□□ 1.36
GTF3C2-214ENST00000622534 TNIKQ9UKE5 1360 aa23.52■■□□□ 1.36
GTF3C2-214ENST00000622534 CHD1O14646 1710 aa23.5■■□□□ 1.35
GTF3C2-214ENST00000622534 UBTFP17480 764 aaKnown RBP23.5■■□□□ 1.35
GTF3C2-214ENST00000622534 FBLN2P98095 1184 aa23.49■■□□□ 1.35
GTF3C2-214ENST00000622534 NUP160Q12769 1436 aa23.49■■□□□ 1.35
GTF3C2-214ENST00000622534 EHMT2Q96KQ7 1210 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms