RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 NISCHQ9Y2I1 1504 aa34.81■■■■□ 3.16
UPK3BL1-201ENST00000340457 ABCC9O60706 1549 aa31.62■■■□□ 2.65
UPK3BL1-201ENST00000340457 CCDC180Q9P1Z9 1646 aa31.25■■■□□ 2.59
UPK3BL1-201ENST00000340457 RB1CC1Q8TDY2 1594 aa29.89■■■□□ 2.38
UPK3BL1-201ENST00000340457 DNAJC5BQ9UF47 199 aa29.89■■■□□ 2.38
UPK3BL1-201ENST00000340457 DCAF8L2P0C7V8 631 aa29.65■■■□□ 2.34
UPK3BL1-201ENST00000340457 NACADO15069 1562 aa29.62■■■□□ 2.33
UPK3BL1-201ENST00000340457 PABPN1Q86U42 306 aaKnown RBP eCLIP29.45■■■□□ 2.31
UPK3BL1-201ENST00000340457 UNC13AQ9UPW8 1703 aa29.26■■■□□ 2.27
UPK3BL1-201ENST00000340457 MYO15BQ96JP2 1530 aa29.08■■■□□ 2.25
UPK3BL1-201ENST00000340457 BICRAQ9NZM4 1560 aa29.07■■■□□ 2.24
UPK3BL1-201ENST00000340457 ZCCHC6Q5VYS8 1495 aaKnown RBP28.8■■■□□ 2.2
UPK3BL1-201ENST00000340457 DCAF1Q9Y4B6 1507 aa28.66■■■□□ 2.18
UPK3BL1-201ENST00000340457 SCRIBQ14160 1630 aa28.6■■■□□ 2.17
UPK3BL1-201ENST00000340457 SHROOM4Q9ULL8 1493 aa28.52■■■□□ 2.16
UPK3BL1-201ENST00000340457 CC2D2AQ9P2K1 1620 aa28.49■■■□□ 2.15
UPK3BL1-201ENST00000340457 CECR2Q9BXF3 1484 aa28.46■■■□□ 2.15
UPK3BL1-201ENST00000340457 EIF4G1Q04637 1599 aaKnown RBP28.36■■■□□ 2.13
UPK3BL1-201ENST00000340457 DNAJC5Q9H3Z4 198 aa27.51■■□□□ 1.99
UPK3BL1-201ENST00000340457 NCAPD3P42695 1498 aa27.37■■□□□ 1.97
UPK3BL1-201ENST00000340457 ATAD2BQ9ULI0 1458 aa27.29■■□□□ 1.96
UPK3BL1-201ENST00000340457 ERCC6Q03468 1493 aa27.28■■□□□ 1.96
UPK3BL1-201ENST00000340457 CUX2O14529 1486 aa27.22■■□□□ 1.95
UPK3BL1-201ENST00000340457 SMARCA4P51532 1647 aa27.2■■□□□ 1.95
UPK3BL1-201ENST00000340457 SMARCA2P51531 1590 aa27.16■■□□□ 1.94
UPK3BL1-201ENST00000340457 HMGXB3Q12766 1538 aa27.12■■□□□ 1.93
UPK3BL1-201ENST00000340457 NESP48681 1621 aa27.11■■□□□ 1.93
UPK3BL1-201ENST00000340457 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
UPK3BL1-201ENST00000340457 BAZ1AQ9NRL2 1556 aaPredicted RBP27.01■■□□□ 1.92
UPK3BL1-201ENST00000340457 MROH2BQ7Z745 1585 aa26.87■■□□□ 1.89
UPK3BL1-201ENST00000340457 PEG3Q9GZU2 1588 aa26.87■■□□□ 1.89
UPK3BL1-201ENST00000340457 THOC2Q8NI27 1593 aaKnown RBP26.79■■□□□ 1.88
UPK3BL1-201ENST00000340457 LAMC3Q9Y6N6 1575 aa26.77■■□□□ 1.88
UPK3BL1-201ENST00000340457 KIF21AQ7Z4S6 1674 aa26.71■■□□□ 1.87
UPK3BL1-201ENST00000340457 PDS5BQ9NTI5 1447 aa26.65■■□□□ 1.86
UPK3BL1-201ENST00000340457 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
UPK3BL1-201ENST00000340457 WIZO95785 1651 aa26.54■■□□□ 1.84
UPK3BL1-201ENST00000340457 MRC2Q9UBG0 1479 aa26.44■■□□□ 1.82
UPK3BL1-201ENST00000340457 WDR62O43379 1518 aa26.36■■□□□ 1.81
UPK3BL1-201ENST00000340457 TRIM41Q8WV44 630 aa26.33■■□□□ 1.81
UPK3BL1-201ENST00000340457 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
UPK3BL1-201ENST00000340457 FANCD2Q9BXW9 1451 aa26.28■■□□□ 1.8
UPK3BL1-201ENST00000340457 RSF1Q96T23 1441 aaPredicted RBP26.23■■□□□ 1.79
UPK3BL1-201ENST00000340457 CFTRP13569 1480 aa26.19■■□□□ 1.78
UPK3BL1-201ENST00000340457 TOP2AP11388 1531 aaKnown RBP26.14■■□□□ 1.77
UPK3BL1-201ENST00000340457 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
UPK3BL1-201ENST00000340457 OSCARQ8IYS5 282 aa26.01■■□□□ 1.75
UPK3BL1-201ENST00000340457 CCDC88BA6NC98 1476 aa25.89■■□□□ 1.74
UPK3BL1-201ENST00000340457 PRDM2Q13029 1718 aa25.87■■□□□ 1.73
UPK3BL1-201ENST00000340457 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.72
UPK3BL1-201ENST00000340457 IFT140Q96RY7 1462 aa25.77■■□□□ 1.72
UPK3BL1-201ENST00000340457 TOPBP1Q92547 1522 aa25.75■■□□□ 1.71
UPK3BL1-201ENST00000340457 RIMBP3CA6NJZ7 1639 aa25.69■■□□□ 1.7
UPK3BL1-201ENST00000340457 RIMBP3BA6NNM3 1639 aa25.69■■□□□ 1.7
UPK3BL1-201ENST00000340457 RIMBP3Q9UFD9 1639 aa25.69■■□□□ 1.7
UPK3BL1-201ENST00000340457 EIF4G3O43432 1585 aaKnown RBP25.62■■□□□ 1.69
UPK3BL1-201ENST00000340457 ABCC8Q09428 1581 aa25.6■■□□□ 1.69
UPK3BL1-201ENST00000340457 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
UPK3BL1-201ENST00000340457 ARHGEF11O15085 1522 aa25.58■■□□□ 1.69
UPK3BL1-201ENST00000340457 AQRO60306 1485 aaKnown RBP eCLIP25.58■■□□□ 1.69
UPK3BL1-201ENST00000340457 TARBP1Q13395 1621 aaKnown RBP25.52■■□□□ 1.68
UPK3BL1-201ENST00000340457 FBLN2P98095 1184 aa25.5■■□□□ 1.67
UPK3BL1-201ENST00000340457 CYB5RLQ6IPT4 315 aa25.49■■□□□ 1.67
UPK3BL1-201ENST00000340457 CHD1O14646 1710 aa25.48■■□□□ 1.67
UPK3BL1-201ENST00000340457 POLA1P09884 1462 aaPredicted RBP25.48■■□□□ 1.67
UPK3BL1-201ENST00000340457 RAD54L2Q9Y4B4 1467 aa25.44■■□□□ 1.66
UPK3BL1-201ENST00000340457 TDRD9Q8NDG6 1382 aaKnown RBP25.39■■□□□ 1.66
UPK3BL1-201ENST00000340457 SOGA1O94964 1423 aa25.37■■□□□ 1.65
UPK3BL1-201ENST00000340457 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
UPK3BL1-201ENST00000340457 FGD5Q6ZNL6 1462 aa25.3■■□□□ 1.64
UPK3BL1-201ENST00000340457 TRHP20396 242 aaPredicted RBP25.28■■□□□ 1.64
UPK3BL1-201ENST00000340457 SNAPC4Q5SXM2 1469 aa25.28■■□□□ 1.64
UPK3BL1-201ENST00000340457 CUX1P39880 1505 aa25.25■■□□□ 1.63
UPK3BL1-201ENST00000340457 CHMP7Q8WUX9 453 aaPredicted RBP25.21■■□□□ 1.63
UPK3BL1-201ENST00000340457 CLASP1Q7Z460 1538 aa25.15■■□□□ 1.62
UPK3BL1-201ENST00000340457 GRIN2BQ13224 1484 aa25.14■■□□□ 1.62
UPK3BL1-201ENST00000340457 WDR97A6NE52 1622 aa25.14■■□□□ 1.62
UPK3BL1-201ENST00000340457 MAGI1Q96QZ7 1491 aaPredicted RBP25.14■■□□□ 1.61
UPK3BL1-201ENST00000340457 SYNJ1O43426 1573 aa25.11■■□□□ 1.61
UPK3BL1-201ENST00000340457 SYNJ2O15056 1496 aa25.08■■□□□ 1.61
UPK3BL1-201ENST00000340457 SUPT5HO00267 1087 aaKnown RBP25.05■■□□□ 1.6
UPK3BL1-201ENST00000340457 GAPVD1Q14C86 1478 aa25.05■■□□□ 1.6
UPK3BL1-201ENST00000340457 PBRM1Q86U86 1689 aa25.03■■□□□ 1.6
UPK3BL1-201ENST00000340457 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
UPK3BL1-201ENST00000340457 ABCA5Q8WWZ7 1642 aa24.94■■□□□ 1.58
UPK3BL1-201ENST00000340457 WRNQ14191 1432 aaPredicted RBP eCLIP24.84■■□□□ 1.57
UPK3BL1-201ENST00000340457 ERCC6L2Q5T890 1561 aa24.83■■□□□ 1.57
UPK3BL1-201ENST00000340457 GRIN2AQ12879 1464 aa24.83■■□□□ 1.57
UPK3BL1-201ENST00000340457 ADAMTS12P58397 1594 aa24.78■■□□□ 1.56
UPK3BL1-201ENST00000340457 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
UPK3BL1-201ENST00000340457 TOP2BQ02880 1626 aa24.74■■□□□ 1.55
UPK3BL1-201ENST00000340457 NUP160Q12769 1436 aa24.74■■□□□ 1.55
UPK3BL1-201ENST00000340457 BIVM-ERCC5R4GMW8 1640 aa24.73■■□□□ 1.55
UPK3BL1-201ENST00000340457 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.54
UPK3BL1-201ENST00000340457 AEBP2Q6ZN18 517 aaPredicted RBP24.67■■□□□ 1.54
UPK3BL1-201ENST00000340457 SHROOM2Q13796 1616 aa24.63■■□□□ 1.53
UPK3BL1-201ENST00000340457 ERICH3Q5RHP9 1530 aa24.62■■□□□ 1.53
UPK3BL1-201ENST00000340457 PRG4Q92954 1404 aaPredicted RBP24.56■■□□□ 1.52
UPK3BL1-201ENST00000340457 JPH4Q96JJ6 628 aa24.54■■□□□ 1.52
UPK3BL1-201ENST00000340457 KIF13AQ9H1H9 1805 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms