Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.22■□□□□ 0.03
BRCC3P46736 AC006372.4-201ENST00000624122 1543 ntBASIC15.22■□□□□ 0.03
BRCC3P46736 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
BRCC3P46736 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
BRCC3P46736 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
BRCC3P46736 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.22■□□□□ 0.03
BRCC3P46736 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.22■□□□□ 0.03
BRCC3P46736 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
BRCC3P46736 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.22■□□□□ 0.03
BRCC3P46736 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.22■□□□□ 0.03
BRCC3P46736 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.22■□□□□ 0.03
BRCC3P46736 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
BRCC3P46736 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
BRCC3P46736 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 HLA-DMA-203ENST00000395305 777 ntBASIC15.22■□□□□ 0.03
BRCC3P46736 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC15.22■□□□□ 0.03
BRCC3P46736 RPL7P35-201ENST00000446943 740 ntBASIC15.22■□□□□ 0.03
BRCC3P46736 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
BRCC3P46736 RN7SL8P-201ENST00000461771 266 ntBASIC15.22■□□□□ 0.03
BRCC3P46736 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 AC005740.1-201ENST00000515639 522 ntBASIC15.22■□□□□ 0.03
BRCC3P46736 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.22■□□□□ 0.03
BRCC3P46736 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
BRCC3P46736 MIR6727-201ENST00000620702 65 ntBASIC15.22■□□□□ 0.03
BRCC3P46736 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
BRCC3P46736 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
BRCC3P46736 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.22■□□□□ 0.03
BRCC3P46736 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.22■□□□□ 0.03
BRCC3P46736 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.22■□□□□ 0.03
BRCC3P46736 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.22■□□□□ 0.03
BRCC3P46736 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.22■□□□□ 0.03
BRCC3P46736 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BRCC3P46736 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.21■□□□□ 0.03
BRCC3P46736 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.21■□□□□ 0.03
BRCC3P46736 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.21■□□□□ 0.03
BRCC3P46736 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
BRCC3P46736 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.21■□□□□ 0.03
BRCC3P46736 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.21■□□□□ 0.03
BRCC3P46736 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.21■□□□□ 0.03
BRCC3P46736 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.21■□□□□ 0.03
BRCC3P46736 HIST2H2BA-201ENST00000412169 381 ntBASIC15.21■□□□□ 0.03
BRCC3P46736 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.21■□□□□ 0.03
BRCC3P46736 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.21■□□□□ 0.03
BRCC3P46736 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 AL512310.5-201ENST00000551999 515 ntBASIC15.21■□□□□ 0.03
BRCC3P46736 AC138701.2-201ENST00000553634 226 ntBASIC15.21■□□□□ 0.03
BRCC3P46736 NDUFB10P1-201ENST00000567319 521 ntBASIC15.21■□□□□ 0.03
BRCC3P46736 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
BRCC3P46736 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.21■□□□□ 0.03
BRCC3P46736 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC15.21■□□□□ 0.03
BRCC3P46736 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.21■□□□□ 0.03
BRCC3P46736 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.21■□□□□ 0.03
BRCC3P46736 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.21■□□□□ 0.03
BRCC3P46736 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
BRCC3P46736 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
BRCC3P46736 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BRCC3P46736 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
BRCC3P46736 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms